RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 PRNDQ9UKY0 176 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 OR51B2Q9Y5P1 312 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 SMAD5-AS1Q9Y6J3 95 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 IGLV11-55A0A075B6I3 123 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 CTDSPLO15194 276 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 GGCTO75223 188 aaKnown RBP12.39□□□□□ -0.43
COL1A1-202ENST00000463440 SERPINE2P07093 398 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 PPP5CP53041 499 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 PIGPP57054 158 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 IL34Q6ZMJ4 242 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 H2BFWTQ7Z2G1 175 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 HAPLN4Q86UW8 402 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 OR10W1Q8NGF6 305 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 OR4D10Q8NGI6 311 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 TERB2Q8NHR7 220 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 ZFAND1Q8TCF1 268 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 LSM10Q969L4 123 aaKnown RBP12.39□□□□□ -0.43
COL1A1-202ENST00000463440 CXorf58Q96LI9 332 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 HINT2Q9BX68 163 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 NDUFA4L2Q9NRX3 87 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 SIGLEC8Q9NYZ4 499 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 NSG2Q9Y328 171 aa12.39□□□□□ -0.43
COL1A1-202ENST00000463440 TRBV7-1A0A0A6YYK4 115 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 PPP5D1E7EU14 171 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 H0Y980 276 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 IGHV3-23P01764 117 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 CSN3P07498 182 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 OR13C7P0DN81 318 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 PI3P19957 117 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 ARL3P36405 182 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 MEF2DQ14814 521 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 SCGB2B2Q4G0G5 96 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 CLEC19AQ6UXS0 136 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 GDPD1Q8N9F7 314 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 OR5B3Q8NH48 314 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 SEC22AQ96IW7 307 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 TMEM56Q96MV1 263 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 SLIRPQ9GZT3 109 aaKnown RBP12.38□□□□□ -0.43
COL1A1-202ENST00000463440 S4R3C0 116 aa12.38□□□□□ -0.43
COL1A1-202ENST00000463440 C15orf61A6NNL5 157 aa12.37□□□□□ -0.43
COL1A1-202ENST00000463440 NHLRC4P0CG21 123 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-202ENST00000463440 WT1-ASQ06250 92 aa12.37□□□□□ -0.43
COL1A1-202ENST00000463440 CCDC71LQ8N9Z2 235 aa12.37□□□□□ -0.43
COL1A1-202ENST00000463440 OR4A16Q8NH70 328 aa12.37□□□□□ -0.43
COL1A1-202ENST00000463440 MCFD2Q8NI22 146 aa12.37□□□□□ -0.43
COL1A1-202ENST00000463440 MRGPRFQ96AM1 343 aa12.37□□□□□ -0.43
COL1A1-202ENST00000463440 CCDC140Q96MF4 163 aa12.37□□□□□ -0.43
COL1A1-202ENST00000463440 TMEM14BQ9NUH8 114 aa12.37□□□□□ -0.43
COL1A1-202ENST00000463440 COPZ2Q9P299 210 aa12.37□□□□□ -0.43
COL1A1-202ENST00000463440 RSL24D1Q9UHA3 163 aaKnown RBP12.37□□□□□ -0.43
COL1A1-202ENST00000463440 DMRT1Q9Y5R6 373 aa12.37□□□□□ -0.43
COL1A1-202ENST00000463440 CCDC160A6NGH7 325 aa12.36□□□□□ -0.43
COL1A1-202ENST00000463440 DISC1C4P0D8 188 aa12.36□□□□□ -0.43
COL1A1-202ENST00000463440 OR2C1O95371 312 aa12.36□□□□□ -0.43
COL1A1-202ENST00000463440 IGKV1-39P01597 117 aa12.36□□□□□ -0.43
COL1A1-202ENST00000463440 HLA-AP01891 365 aaKnown RBP12.36□□□□□ -0.43
COL1A1-202ENST00000463440 IGKV1D-39P04432 117 aa12.36□□□□□ -0.43
COL1A1-202ENST00000463440 MECP2P51608 486 aaKnown RBP12.36□□□□□ -0.43
COL1A1-202ENST00000463440 LCN12Q6JVE5 192 aa12.36□□□□□ -0.43
COL1A1-202ENST00000463440 C11orf87Q6NUJ2 197 aa12.36□□□□□ -0.43
COL1A1-202ENST00000463440 SLC25A24Q6NUK1 477 aa12.36□□□□□ -0.43
COL1A1-202ENST00000463440 GPHB5Q86YW7 130 aa12.36□□□□□ -0.43
COL1A1-202ENST00000463440 OR13C8Q8NGS7 320 aa12.36□□□□□ -0.43
COL1A1-202ENST00000463440 CEPT1Q9Y6K0 416 aa12.36□□□□□ -0.43
COL1A1-202ENST00000463440 C3orf85A0A1B0GTC6 90 aa12.35□□□□□ -0.43
COL1A1-202ENST00000463440 MFSD2BA6NFX1 497 aa12.35□□□□□ -0.43
COL1A1-202ENST00000463440 LGALS9O00182 355 aa12.35□□□□□ -0.43
COL1A1-202ENST00000463440 ATG12O94817 140 aa12.35□□□□□ -0.43
COL1A1-202ENST00000463440 CTSDP07339 412 aaPredicted RBP12.35□□□□□ -0.43
COL1A1-202ENST00000463440 AKAIN1P0CW23 69 aa12.35□□□□□ -0.43
COL1A1-202ENST00000463440 FAM106AQ4KMX7 169 aa12.35□□□□□ -0.43
COL1A1-202ENST00000463440 Q8N402 240 aa12.35□□□□□ -0.43
COL1A1-202ENST00000463440 OR1L6Q8NGR2 347 aa12.35□□□□□ -0.43
COL1A1-202ENST00000463440 OR2K2Q8NGT1 345 aa12.35□□□□□ -0.43
COL1A1-202ENST00000463440 MARCH1Q8TCQ1 289 aa12.35□□□□□ -0.43
COL1A1-202ENST00000463440 TP53RKQ96S44 253 aa12.35□□□□□ -0.43
COL1A1-202ENST00000463440 NXF2Q9GZY0 626 aaKnown RBP12.35□□□□□ -0.43
COL1A1-202ENST00000463440 C14orf166Q9Y224 244 aaKnown RBP12.35□□□□□ -0.43
COL1A1-202ENST00000463440 F11RQ9Y624 299 aaKnown RBP12.35□□□□□ -0.43
COL1A1-202ENST00000463440 FABP12A6NFH5 140 aa12.34□□□□□ -0.43
COL1A1-202ENST00000463440 GSTZ1O43708 216 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-202ENST00000463440 B3GALNT1O75752 331 aa12.34□□□□□ -0.43
COL1A1-202ENST00000463440 CLEC3BP05452 202 aa12.34□□□□□ -0.43
COL1A1-202ENST00000463440 TNFSF8P32971 234 aa12.34□□□□□ -0.43
COL1A1-202ENST00000463440 TRIM16LQ309B1 348 aa12.34□□□□□ -0.43
COL1A1-202ENST00000463440 FAAP20Q6NZ36 180 aa12.34□□□□□ -0.43
COL1A1-202ENST00000463440 ZNF502Q8TBZ5 544 aa12.34□□□□□ -0.43
COL1A1-202ENST00000463440 VN1R17PQ8TDU5 208 aa12.34□□□□□ -0.43
COL1A1-202ENST00000463440 DBX1A6NMT0 343 aa12.33□□□□□ -0.44
COL1A1-202ENST00000463440 GPR183P32249 361 aa12.33□□□□□ -0.44
COL1A1-202ENST00000463440 AKR1C2P52895 323 aa12.33□□□□□ -0.44
COL1A1-202ENST00000463440 SURF2Q15527 256 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-202ENST00000463440 OR4C16Q8NGL9 310 aa12.33□□□□□ -0.44
COL1A1-202ENST00000463440 DYNLRB2Q8TF09 96 aa12.33□□□□□ -0.44
COL1A1-202ENST00000463440 ASCL2Q99929 193 aa12.33□□□□□ -0.44
COL1A1-202ENST00000463440 PRRT1Q99946 306 aa12.33□□□□□ -0.44
COL1A1-202ENST00000463440 COL7A1Q02388 2944 aa12.32□□□□□ -0.44
COL1A1-202ENST00000463440 ANKRD20A5PA0PJZ0 165 aa12.32□□□□□ -0.44
COL1A1-202ENST00000463440 ZNF320A2RRD8 509 aa12.32□□□□□ -0.44
COL1A1-202ENST00000463440 C2orf70A6NJV1 201 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms