RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 FAM90A2PQ658T7 463 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 OR8B3Q8NGG8 313 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 OR5B3Q8NH48 314 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 TMEM167AQ8TBQ9 72 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 GATAD1Q8WUU5 269 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 NEU4Q8WWR8 484 aaPredicted RBP8.22□□□□□ -1.09
MSH5-211ENST00000463144 OR8B2Q96RD0 313 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 ACTR3CQ9C0K3 210 aaPredicted RBP8.22□□□□□ -1.09
MSH5-211ENST00000463144 FKBP11Q9NYL4 201 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 PKD1L2Q7Z442 2459 aa8.21□□□□□ -1.09
MSH5-211ENST00000463144 ARHGAP32A7KAX9 2087 aa8.21□□□□□ -1.09
MSH5-211ENST00000463144 RNASE2P10153 161 aaKnown RBP8.21□□□□□ -1.1
MSH5-211ENST00000463144 OPRK1P41145 380 aa8.21□□□□□ -1.1
MSH5-211ENST00000463144 RPL8P62917 257 aaKnown RBP8.21□□□□□ -1.1
MSH5-211ENST00000463144 MLANAQ16655 118 aa8.21□□□□□ -1.1
MSH5-211ENST00000463144 HLA-DRB5Q30154 266 aa8.21□□□□□ -1.1
MSH5-211ENST00000463144 ACOT6Q3I5F7 207 aaPredicted RBP8.21□□□□□ -1.1
MSH5-211ENST00000463144 MIC13Q5XKP0 118 aa8.21□□□□□ -1.1
MSH5-211ENST00000463144 MOB3BQ86TA1 216 aa8.21□□□□□ -1.1
MSH5-211ENST00000463144 RAB1CQ92928 201 aa8.21□□□□□ -1.1
MSH5-211ENST00000463144 TNFRSF14Q92956 283 aa8.21□□□□□ -1.1
MSH5-211ENST00000463144 CLEC7AQ9BXN2 247 aa8.21□□□□□ -1.1
MSH5-211ENST00000463144 SMCO4Q9NRQ5 59 aa8.21□□□□□ -1.1
MSH5-211ENST00000463144 TPSG1Q9NRR2 321 aa8.21□□□□□ -1.1
MSH5-211ENST00000463144 VAX2Q9UIW0 290 aa8.21□□□□□ -1.1
MSH5-211ENST00000463144 SEC14L6B5MCN3 397 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 BUB1B-PAK6H3BSN5 160 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 CYB5BO43169 146 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 NDUFS7O75251 213 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 RBP4P02753 201 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 USF1P22415 310 aaPredicted RBP8.2□□□□□ -1.1
MSH5-211ENST00000463144 MC5RP33032 325 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 PRRX1P54821 245 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 CD81P60033 236 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 C10orf55Q5SWW7 151 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 ZNF430Q9H8G1 570 aaPredicted RBP8.2□□□□□ -1.1
MSH5-211ENST00000463144 UNKLQ9H9P5 680 aaKnown RBP8.2□□□□□ -1.1
MSH5-211ENST00000463144 PATZ1Q9HBE1 687 aaKnown RBP8.2□□□□□ -1.1
MSH5-211ENST00000463144 PXMP4Q9Y6I8 212 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 COX7A1P24310 79 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 IL3RAP26951 378 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 CDKN1AP38936 164 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 CDC34P49427 236 aaPredicted RBP8.2□□□□□ -1.1
MSH5-211ENST00000463144 RHEBQ15382 184 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 C2orf83Q53S99 150 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 LDLRAD2Q5SZI1 272 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 BEND2Q8NDZ0 799 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 OR4P4Q8NGL7 312 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 OR4A5Q8NH83 315 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 SSMEM1Q8WWF3 244 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 COMMD5Q9GZQ3 224 aa8.2□□□□□ -1.1
MSH5-211ENST00000463144 SPTBN1Q01082 2364 aaKnown RBP8.2□□□□□ -1.1
MSH5-211ENST00000463144 LY6LH3BQJ8 138 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 ENSAO43768 121 aaKnown RBP8.19□□□□□ -1.1
MSH5-211ENST00000463144 SLC25A17O43808 307 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 IGFBP2P18065 325 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 CNTFRP26992 372 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 RAB13P51153 203 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 WT1-ASQ06250 92 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 TEPPQ6URK8 271 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 OR1L8Q8NGR8 309 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 ISOC2Q96AB3 205 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 TIMD4Q96H15 378 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 P2RX4Q99571 388 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 CHODLQ9H9P2 273 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 IGKV1OR2-108A0A075B7D4 117 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 IGHV1-3A0A0C4DH29 117 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 A0A1W2PPE2 198 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 A0A1W2PPH5 198 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 FNDC10F2Z333 226 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 INS-IGF2F8WCM5 200 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 LIPFP07098 398 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 AGAP20933 346 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 RBMS3Q6XE24 437 aaKnown RBP8.19□□□□□ -1.1
MSH5-211ENST00000463144 SLC35E3Q7Z769 313 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 PNKDQ8N490 385 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 VSTM2AQ8TAG5 236 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 TUBA4BQ9H853 241 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 ONECUT1Q9UBC0 465 aa8.19□□□□□ -1.1
MSH5-211ENST00000463144 KMT2BQ9UMN6 2715 aaPredicted RBP8.18□□□□□ -1.1
MSH5-211ENST00000463144 IFNA1P01562 189 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 CRYBA1P05813 215 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 CRYGBP07316 175 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 LINC00869P0C866 280 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 PAX6P26367 422 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 ARF6P62330 175 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 MEF2BQ02080 365 aaPredicted RBP8.18□□□□□ -1.1
MSH5-211ENST00000463144 GAMTQ14353 236 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 C15orf54Q8N8G6 183 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 HIST1H2BAQ96A08 127 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 TVP23CQ96ET8 276 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 UBTD1Q9HAC8 227 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 INSIG2Q9Y5U4 225 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 ZNF727A8MUV8 499 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 SOX15O60248 233 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 PAGE4O60829 102 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 RPL29P47914 159 aaKnown RBP8.18□□□□□ -1.1
MSH5-211ENST00000463144 LGALS7P47929 136 aa8.18□□□□□ -1.1
MSH5-211ENST00000463144 ATP5IP56385 69 aaPredicted RBP8.18□□□□□ -1.1
MSH5-211ENST00000463144 PRR20EP86478 221 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms