RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 LINC00052Q96N35 136 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 CLEC5AQ9NY25 188 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 FNDC10F2Z333 226 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 ZNF506Q5JVG8 444 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 OR5AU1Q8NGC0 362 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 CRIM1Q9NZV1 1036 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 FER1L5A0AVI2 2057 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 LRP4O75096 1905 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 NUP210LQ5VU65 1888 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 CXorf65A6NEN9 183 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 LYL1P12980 280 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 TUSC1Q2TAM9 212 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 Q6ZR03 302 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 LINC00311Q8N616 119 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 JMJD8Q96S16 334 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 FBXL15Q9H469 300 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 TRAV20A0A0B4J274 112 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 MSGN1A6NI15 193 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 BEND2Q8NDZ0 799 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 NPIPB3Q92617 1050 aa9.73□□□□□ -0.85
RBM39-223ENST00000463004 TIMM8BQ9Y5J9 83 aaPredicted RBP9.73□□□□□ -0.85
RBM39-223ENST00000463004 F12P00748 615 aaPredicted RBP9.72□□□□□ -0.85
RBM39-223ENST00000463004 PRTN3P24158 256 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 VKORC1L1Q8N0U8 176 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 FUT9Q9Y231 359 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 HEATR1Q9H583 2144 aaKnown RBP9.72□□□□□ -0.85
RBM39-223ENST00000463004 A6NNC1 897 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 SMIM17P0DL12 118 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 RIGQ13278 110 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 PVRIGQ6DKI7 326 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 DMRTA2Q96SC8 542 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 OR51M1Q9H341 326 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 ZNF503-AS2A6NEH8 195 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 VENTXO95231 258 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 P01737 135 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 RPL29P47914 159 aaKnown RBP9.72□□□□□ -0.85
RBM39-223ENST00000463004 IZUMO4Q1ZYL8 232 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 C2orf83Q53S99 150 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 TPTE2P1Q5T6R2 138 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 WDFY1Q8IWB7 410 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 ZCCHC24Q8N2G6 241 aaKnown RBP9.72□□□□□ -0.85
RBM39-223ENST00000463004 RPRMLQ8N4K4 120 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 NECAP1Q8NC96 275 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 ZNF586Q9NXT0 402 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 IL6RP08887 468 aaPredicted RBP9.72□□□□□ -0.85
RBM39-223ENST00000463004 TMEM88Q6PEY1 159 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 PARD6GQ9BYG4 376 aaPredicted RBP9.72□□□□□ -0.85
RBM39-223ENST00000463004 TRAPPC1Q9Y5R8 145 aa9.72□□□□□ -0.85
RBM39-223ENST00000463004 SUMO1P63165 101 aaKnown RBP9.71□□□□□ -0.85
RBM39-223ENST00000463004 RNF144BQ7Z419 303 aa9.71□□□□□ -0.85
RBM39-223ENST00000463004 C8orf31Q8N9H6 132 aa9.71□□□□□ -0.85
RBM39-223ENST00000463004 RPRMQ9NS64 109 aa9.71□□□□□ -0.85
RBM39-223ENST00000463004 WDR83OSQ9Y284 106 aa9.71□□□□□ -0.85
RBM39-223ENST00000463004 COL5A1P20908 1838 aaPredicted RBP9.71□□□□□ -0.86
RBM39-223ENST00000463004 RRHO14718 337 aa9.71□□□□□ -0.86
RBM39-223ENST00000463004 ZNF273Q14593 569 aa9.71□□□□□ -0.86
RBM39-223ENST00000463004 SRSF12Q8WXF0 261 aaKnown RBP9.71□□□□□ -0.86
RBM39-223ENST00000463004 HIST1H2BAQ96A08 127 aa9.71□□□□□ -0.86
RBM39-223ENST00000463004 RNF166Q96A37 237 aaPredicted RBP9.71□□□□□ -0.86
RBM39-223ENST00000463004 GPR82Q96P67 336 aa9.71□□□□□ -0.86
RBM39-223ENST00000463004 C21orf62Q9NYP8 219 aa9.71□□□□□ -0.86
RBM39-223ENST00000463004 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.71□□□□□ -0.86
RBM39-223ENST00000463004 RPS20P60866 119 aaKnown RBP9.71□□□□□ -0.86
RBM39-223ENST00000463004 RCC1LQ96I51 464 aaKnown RBP9.71□□□□□ -0.86
RBM39-223ENST00000463004 NPFFR1Q9GZQ6 430 aa9.71□□□□□ -0.86
RBM39-223ENST00000463004 CACNA1DQ01668 2161 aa9.71□□□□□ -0.86
RBM39-223ENST00000463004 SH2D7A6NKC9 451 aaPredicted RBP9.7□□□□□ -0.86
RBM39-223ENST00000463004 TDGF1P3P51864 188 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 CD69Q07108 199 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 RNF212Q495C1 297 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 A8MWL6 223 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 H0YIZ8 118 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 MT-ND6P03923 174 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 NPPCP23582 126 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 COL8A1P27658 744 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 GCHFRP30047 84 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 DLX6P56179 175 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 HERPUD1Q15011 391 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 OTOGLQ3ZCN5 2332 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 LOC102723971A0A1B0GUV8 181 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 TGFAP01135 160 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 RAB4AP20338 218 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 AARDQ4LEZ3 155 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 LYPD6Q86Y78 171 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 KIR3DL3Q8N743 410 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 DYNLRB2Q8TF09 96 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 MED19A0JLT2 244 aaPredicted RBP9.7□□□□□ -0.86
RBM39-223ENST00000463004 MPTX1A8MV57 137 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 OR1P1Q8NH06 330 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 METRNQ9UJH8 293 aa9.7□□□□□ -0.86
RBM39-223ENST00000463004 FOXI3A8MTJ6 420 aaPredicted RBP9.69□□□□□ -0.86
RBM39-223ENST00000463004 PRSS8Q16651 343 aa9.69□□□□□ -0.86
RBM39-223ENST00000463004 CYB561D1Q8N8Q1 229 aa9.69□□□□□ -0.86
RBM39-223ENST00000463004 FGF16O43320 207 aa9.69□□□□□ -0.86
RBM39-223ENST00000463004 WNT2P09544 360 aa9.69□□□□□ -0.86
RBM39-223ENST00000463004 WDR86Q86TI4 376 aa9.69□□□□□ -0.86
RBM39-223ENST00000463004 KLF2Q9Y5W3 355 aaPredicted RBP9.69□□□□□ -0.86
RBM39-223ENST00000463004 RTTNQ86VV8 2226 aa9.69□□□□□ -0.86
RBM39-223ENST00000463004 SERTM2A0A1B0GWG4 89 aa9.69□□□□□ -0.86
RBM39-223ENST00000463004 A1L4Q6 167 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms