RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 TOR2AQ5JU69 321 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 THOC7Q6I9Y2 204 aaKnown RBP4.45□□□□□ -1.7
VPS36-202ENST00000462289 OR4A47Q6IF82 309 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 FAAP20Q6NZ36 180 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 TBC1D26Q86UD7 250 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 ZNF429Q86V71 674 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 FOXRED2Q8IWF2 684 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 MMD2Q8IY49 270 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 SPAG16Q8N0X2 631 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 C3orf56Q8N813 242 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 LRTM2Q8N967 370 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 ADAD2Q8NCV1 583 aaKnown RBP4.45□□□□□ -1.7
VPS36-202ENST00000462289 WFDC9Q8NEX5 89 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 OR5AU1Q8NGC0 362 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 LHFPL5Q8TAF8 219 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 VSTM2AQ8TAG5 236 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 TCTEX1D2Q8WW35 142 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 IL22RA2Q969J5 263 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 TMEM56Q96MV1 263 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 NOL4LQ96MY1 436 aaPredicted RBP4.45□□□□□ -1.7
VPS36-202ENST00000462289 OR2A7Q96R45 310 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 TP53RKQ96S44 253 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 RASL11BQ9BPW5 248 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 GON7Q9BXV9 100 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 TMEM222Q9H0R3 208 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 ZFP57Q9NU63 452 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 TMEM14BQ9NUH8 114 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 KIAA1456Q9P272 454 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 METTL1Q9UBP6 276 aaKnown RBP4.45□□□□□ -1.7
VPS36-202ENST00000462289 VSIG4Q9Y279 399 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 ZNF257Q9Y2Q1 563 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 TMEM56-RWDD3S4R434 201 aa4.45□□□□□ -1.7
VPS36-202ENST00000462289 PRKDCP78527 4128 aaKnown RBP4.44□□□□□ -1.7
VPS36-202ENST00000462289 TRAV41A0A0B4J266 112 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 IGLC7A0M8Q6 106 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 PSMB11A5LHX3 300 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 NAP1L6A6NFF2 107 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 NPIPB5A8MRT5 1133 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 DISC1C4P0D8 188 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 G3V318 75 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 I3L521 148 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 UPK2O00526 184 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 TNFSF12O43508 249 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 CREBL2O60519 120 aaPredicted RBP4.44□□□□□ -1.7
VPS36-202ENST00000462289 NDUFB6O95139 128 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 CA2P00918 260 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 IGKV1-5P01602 117 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 RLN1P04808 185 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 IFNA6P05013 189 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 CD28P10747 220 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 OR2B8PP59922 312 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 UBE2MP61081 183 aaKnown RBP4.44□□□□□ -1.7
VPS36-202ENST00000462289 TSPAN5P62079 268 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 RPL23AP62750 156 aaKnown RBP4.44□□□□□ -1.7
VPS36-202ENST00000462289 IFITM3Q01628 133 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 TMEM187Q14656 261 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 BSXQ3C1V8 233 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 VMA21Q3ZAQ7 101 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 PYDC2Q56P42 97 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 RNASE12Q5GAN4 147 aaKnown RBP4.44□□□□□ -1.7
VPS36-202ENST00000462289 NMSQ5H8A3 153 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 TEX38Q6PEX7 206 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 IDO2Q6ZQW0 420 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 TOMM5Q8N4H5 51 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 TTC9CQ8N5M4 171 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 OR5M8Q8NGP6 311 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 OR51H1Q8NH63 302 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 MARCH1Q8TCQ1 289 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 SRSF12Q8WXF0 261 aaKnown RBP4.44□□□□□ -1.7
VPS36-202ENST00000462289 S100ZQ8WXG8 99 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 ARPC1AQ92747 370 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 UBE2E2Q96LR5 201 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 P2RX4Q99571 388 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 CITED2Q99967 270 aaPredicted RBP4.44□□□□□ -1.7
VPS36-202ENST00000462289 ALX4Q9H161 411 aaPredicted RBP4.44□□□□□ -1.7
VPS36-202ENST00000462289 NDUFA4L2Q9NRX3 87 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 COA4Q9NYJ1 87 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 SCP2D1Q9UJQ7 156 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 TBC1D24Q9ULP9 559 aa4.44□□□□□ -1.7
VPS36-202ENST00000462289 RBM7Q9Y580 266 aaKnown RBP4.44□□□□□ -1.7
VPS36-202ENST00000462289 TRAV3A0A0B4J244 114 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 A0A0B4J293 547 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 C3orf85A0A1B0GTC6 90 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 C15orf61A6NNL5 157 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 J3QRK9 145 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 PITX3O75364 302 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 UPK1BO75841 260 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 OPN1MWP04001 364 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 OPN1MW2P0DN77 364 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 OPN1MW3P0DN78 364 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 CTRB1P17538 263 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 HLA-GP17693 338 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 FAUP35544 74 aaKnown RBP4.43□□□□□ -1.7
VPS36-202ENST00000462289 RPL8P62917 257 aaKnown RBP4.43□□□□□ -1.7
VPS36-202ENST00000462289 CBX3Q13185 183 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 ASAH1Q13510 395 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 FXYD3Q14802 87 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 RBMS2Q15434 407 aaKnown RBP4.43□□□□□ -1.7
VPS36-202ENST00000462289 PHLDA2Q53GA4 152 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 TMEM128Q5BJH2 165 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms