RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 ABCG5Q9H222 651 aa2.9□□□□□ -1.95
UBA3-204ENST00000461522 DCSTAMPQ9H295 470 aa2.9□□□□□ -1.95
UBA3-204ENST00000461522 OR51J1Q9H342 316 aa2.9□□□□□ -1.95
UBA3-204ENST00000461522 ZNF442Q9H7R0 627 aa2.9□□□□□ -1.95
UBA3-204ENST00000461522 ELL3Q9HB65 397 aaPredicted RBP2.9□□□□□ -1.95
UBA3-204ENST00000461522 NRN1Q9NPD7 142 aa2.9□□□□□ -1.95
UBA3-204ENST00000461522 ASF1BQ9NVP2 202 aa2.9□□□□□ -1.95
UBA3-204ENST00000461522 SPANXCQ9NY87 97 aa2.9□□□□□ -1.95
UBA3-204ENST00000461522 COMMD9Q9P000 198 aa2.9□□□□□ -1.95
UBA3-204ENST00000461522 RPS6KB2Q9UBS0 482 aa2.9□□□□□ -1.95
UBA3-204ENST00000461522 MCTS1Q9ULC4 181 aaKnown RBP2.9□□□□□ -1.95
UBA3-204ENST00000461522 ING4Q9UNL4 249 aa2.9□□□□□ -1.95
UBA3-204ENST00000461522 EXOSC1Q9Y3B2 195 aaKnown RBP2.9□□□□□ -1.95
UBA3-204ENST00000461522 MED31Q9Y3C7 131 aa2.9□□□□□ -1.95
UBA3-204ENST00000461522 IGSF10Q6WRI0 2623 aa2.9□□□□□ -1.95
UBA3-204ENST00000461522 ITPR1Q14643 2758 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 NCKAP5O14513 1909 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 CFAP46Q8IYW2 2715 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 PRRC2CQ9Y520 2896 aaKnown RBP2.89□□□□□ -1.95
UBA3-204ENST00000461522 IGKV1D-42A0A075B6H8 117 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 A0A087WUU8 490 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 A0A087WXM4 84 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 A0A0J9YW62 118 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 C20orf202A1L168 122 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 MAP1LC3B2A6NCE7 125 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 LINC00862A6NCI5 91 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 KRBOX1C9JBD0 128 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 SULT2B1O00204 365 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 ZNF593O00488 134 aaPredicted RBP2.89□□□□□ -1.95
UBA3-204ENST00000461522 MFNGO00587 321 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 TCF21O43680 179 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 CXCL13O43927 109 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 GADD45GO95257 159 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 SOX14O95416 240 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 IFNA17P01571 189 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 CD8AP01732 235 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 ARG1P05089 322 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 CRYGDP07320 174 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 ASAH2BP0C7U1 165 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 GKN3PP0CG01 181 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 OPRM1P35372 400 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 OR1E2P47887 323 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 LGALS7P47929 136 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 ZNF133P52736 654 aaPredicted RBP2.89□□□□□ -1.95
UBA3-204ENST00000461522 EMX1Q04741 257 aaPredicted RBP2.89□□□□□ -1.95
UBA3-204ENST00000461522 FMODQ06828 376 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 FOXF1Q12946 379 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 C6orf52Q5T4I8 152 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 C1orf140Q5VVS0 124 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 WDR82Q6UXN9 313 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 FA2HQ7L5A8 372 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 PACRGLQ8N7B6 248 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 GDPD1Q8N9F7 314 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 UBAC2Q8NBM4 344 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 OR1L8Q8NGR8 309 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 OR10D3Q8NH80 312 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 GNPDA2Q8TDQ7 276 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 SFT2D1Q8WV19 159 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 RPUSD4Q96CM3 377 aaKnown RBP2.89□□□□□ -1.95
UBA3-204ENST00000461522 ISOC1Q96CN7 298 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 ZMYND19Q96E35 227 aaPredicted RBP2.89□□□□□ -1.95
UBA3-204ENST00000461522 DNAJC30Q96LL9 226 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 RDH12Q96NR8 316 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 OXGR1Q96P68 337 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 GPX7Q96SL4 187 aaPredicted RBP2.89□□□□□ -1.95
UBA3-204ENST00000461522 PDCD1LG2Q9BQ51 273 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 WFDC6Q9BQY6 131 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 SFXN3Q9BWM7 321 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 MAP1LC3BQ9GZQ8 125 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 DEFB127Q9H1M4 99 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 REEP1Q9H902 201 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 ADGRL4Q9HBW9 690 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 MEPEQ9NQ76 525 aaPredicted RBP2.89□□□□□ -1.95
UBA3-204ENST00000461522 SPRR3Q9UBC9 169 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 CLCF1Q9UBD9 225 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 FBXO7Q9Y3I1 522 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 ZNF462Q96JM2 2506 aa2.89□□□□□ -1.95
UBA3-204ENST00000461522 SPTAN1Q13813 2472 aaKnown RBP2.88□□□□□ -1.95
UBA3-204ENST00000461522 DNAJC13O75165 2243 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 NINQ8N4C6 2090 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 TMEM72A0PK05 275 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 CPSF4LA6NMK7 179 aaKnown RBP2.88□□□□□ -1.95
UBA3-204ENST00000461522 LYRM9A8MSI8 78 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 CEACAM18A8MTB9 384 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 H3BMQ9 156 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 RPL36A-HNRNPH2H7BZ11 118 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 TNFRSF11BO00300 401 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 CCL21O00585 134 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 SS18L1O75177 396 aaPredicted RBP2.88□□□□□ -1.95
UBA3-204ENST00000461522 CA11O75493 328 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 IFNA7P01567 189 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 IGHMP01871 453 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 BGLAPP02818 100 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 OPN1SWP03999 348 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 CD99P14209 185 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 RAB5AP20339 215 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 COX5AP20674 150 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 GGT2P36268 569 aa2.88□□□□□ -1.95
UBA3-204ENST00000461522 MDH2P40926 338 aaKnown RBP2.88□□□□□ -1.95
UBA3-204ENST00000461522 TFPI2P48307 235 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms