RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 FAM212BQ9NTI7 297 aaPredicted RBP11.35□□□□□ -0.59
NCK1-202ENST00000460960 ZNF580Q9UK33 172 aa11.35□□□□□ -0.59
NCK1-202ENST00000460960 EPPK1P58107 5090 aaKnown RBP11.34□□□□□ -0.59
NCK1-202ENST00000460960 BIRC6Q9NR09 4857 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 NAP1L6A6NFF2 107 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 IGLV1-40P01703 118 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 IGHG4P01861 327 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 HLA-GP17693 338 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 CDX1P47902 265 aaPredicted RBP11.34□□□□□ -0.59
NCK1-202ENST00000460960 ERVK-16P61578 105 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 RPL8P62917 257 aaKnown RBP11.34□□□□□ -0.59
NCK1-202ENST00000460960 FOXE3Q13461 319 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 KIAA0141Q14154 515 aaPredicted RBP11.34□□□□□ -0.59
NCK1-202ENST00000460960 TMEM187Q14656 261 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 RBMS2Q15434 407 aaKnown RBP11.34□□□□□ -0.59
NCK1-202ENST00000460960 TRIM16LQ309B1 348 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 OR5T1Q8NG75 326 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 OR11H1Q8NG94 326 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 VSTM2AQ8TAG5 236 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 SLC25A21Q9BQT8 299 aaPredicted RBP11.34□□□□□ -0.59
NCK1-202ENST00000460960 TMEM222Q9H0R3 208 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 ZMAT4Q9H898 229 aa11.34□□□□□ -0.59
NCK1-202ENST00000460960 HUWE1Q7Z6Z7 4374 aaKnown RBP11.34□□□□□ -0.59
NCK1-202ENST00000460960 SACSQ9NZJ4 4579 aa11.33□□□□□ -0.6
NCK1-202ENST00000460960 RBMXL2O75526 392 aaKnown RBP11.33□□□□□ -0.6
NCK1-202ENST00000460960 ELANEP08246 267 aa11.33□□□□□ -0.6
NCK1-202ENST00000460960 AREGP15514 252 aa11.33□□□□□ -0.6
NCK1-202ENST00000460960 PSMB8P28062 276 aa11.33□□□□□ -0.6
NCK1-202ENST00000460960 PPP1R1AQ13522 171 aa11.33□□□□□ -0.6
NCK1-202ENST00000460960 ANKRD55Q3KP44 614 aa11.33□□□□□ -0.6
NCK1-202ENST00000460960 Q6ZRM9 215 aa11.33□□□□□ -0.6
NCK1-202ENST00000460960 SELENOHQ8IZQ5 122 aaKnown RBP11.33□□□□□ -0.6
NCK1-202ENST00000460960 OR4A5Q8NH83 315 aa11.33□□□□□ -0.6
NCK1-202ENST00000460960 C4orf3Q8WVX3 66 aa11.33□□□□□ -0.6
NCK1-202ENST00000460960 FYTTD1Q96QD9 318 aaKnown RBP11.33□□□□□ -0.6
NCK1-202ENST00000460960 C7orf50Q9BRJ6 194 aaKnown RBP11.33□□□□□ -0.6
NCK1-202ENST00000460960 FOXA2Q9Y261 457 aaPredicted RBP11.33□□□□□ -0.6
NCK1-202ENST00000460960 CDS2O95674 445 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 PRH1P02810 166 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 REG1AP05451 166 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 ANXA7P20073 488 aaKnown RBP11.32□□□□□ -0.6
NCK1-202ENST00000460960 RPL27AP46776 148 aaKnown RBP11.32□□□□□ -0.6
NCK1-202ENST00000460960 DHODHQ02127 395 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 ASAH1Q13510 395 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 AKIRIN2Q53H80 203 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 SLC25A42Q86VD7 318 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 SGPP2Q8IWX5 399 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 CENPSQ8N2Z9 138 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 RNF152Q8N8N0 203 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 OR10W1Q8NGF6 305 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 GALNT14Q96FL9 552 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 MS4A10Q96PG2 267 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 SCGB3A2Q96PL1 93 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 OR5B12Q96R08 314 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 PHB2Q99623 299 aa11.32□□□□□ -0.6
NCK1-202ENST00000460960 A0A0B4J293 547 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 TEX50A0A1B0GTY4 177 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 CENPXA8MT69 81 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 ACTL6BO94805 426 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 FRMD6-AS1P0C7T7 363 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 TMEM268Q5VZI3 342 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 ADAMTSL5Q6ZMM2 481 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 H2BFWTQ7Z2G1 175 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 MYOZ3Q8TDC0 251 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 TMEM56Q96MV1 263 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 AIFM2Q9BRQ8 373 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 QTRT1Q9BXR0 403 aaKnown RBP11.31□□□□□ -0.6
NCK1-202ENST00000460960 GNB4Q9HAV0 340 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 TMEM14BQ9NUH8 114 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 TMEM56-RWDD3S4R434 201 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 DNAH7Q8WXX0 4024 aa11.31□□□□□ -0.6
NCK1-202ENST00000460960 TRAV6A0A075B6T7 132 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 IGLC7A0M8Q6 106 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 C15orf61A6NNL5 157 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 CREBL2O60519 120 aaPredicted RBP11.3□□□□□ -0.6
NCK1-202ENST00000460960 TCRBP04435 133 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 OR8U8P0C7N1 319 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 VAMP1P23763 118 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 MAS1LP35410 378 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 INSL3P51460 131 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 AKR1C2P52895 323 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 FHL3Q13643 280 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 TMEM128Q5BJH2 165 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 SPINK9Q5DT21 86 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 LYZL2Q7Z4W2 148 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 SLC35G3Q8N808 338 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 OR1N2Q8NGR9 330 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 RBPMSQ93062 196 aaKnown RBP11.3□□□□□ -0.6
NCK1-202ENST00000460960 GPR146Q96CH1 333 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 C20orf85Q9H1P6 137 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 OR51B2Q9Y5P1 312 aa11.3□□□□□ -0.6
NCK1-202ENST00000460960 SAP30O75446 220 aa11.29□□□□□ -0.6
NCK1-202ENST00000460960 SFT2D2O95562 160 aa11.29□□□□□ -0.6
NCK1-202ENST00000460960 RAB9AP51151 201 aa11.29□□□□□ -0.6
NCK1-202ENST00000460960 TMEM267Q0VDI3 215 aaPredicted RBP11.29□□□□□ -0.6
NCK1-202ENST00000460960 TMEM65Q6PI78 240 aa11.29□□□□□ -0.6
NCK1-202ENST00000460960 CADM3Q8N126 398 aa11.29□□□□□ -0.6
NCK1-202ENST00000460960 OR52B4Q8NGK2 314 aa11.29□□□□□ -0.6
NCK1-202ENST00000460960 SPIN2AQ99865 258 aa11.29□□□□□ -0.6
NCK1-202ENST00000460960 SPIN2BQ9BPZ2 258 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms