RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 NPIPB9F8W1W9 429 aa7.63□□□□□ -1.19
SHROOM4-203ENST00000460112 LINC00470Q9BZP3 86 aa7.63□□□□□ -1.19
SHROOM4-203ENST00000460112 NUP210Q8TEM1 1887 aaPredicted RBP7.63□□□□□ -1.19
SHROOM4-203ENST00000460112 TRBV5-5A0A0J9YX44 114 aa7.63□□□□□ -1.19
SHROOM4-203ENST00000460112 MUC1P15941 1255 aaPredicted RBP7.63□□□□□ -1.19
SHROOM4-203ENST00000460112 DRD3P35462 400 aa7.63□□□□□ -1.19
SHROOM4-203ENST00000460112 TNFRSF9Q07011 255 aa7.63□□□□□ -1.19
SHROOM4-203ENST00000460112 SRSF4Q08170 494 aaKnown RBP7.63□□□□□ -1.19
SHROOM4-203ENST00000460112 NEU4Q8WWR8 484 aaPredicted RBP7.63□□□□□ -1.19
SHROOM4-203ENST00000460112 DNASE2BQ8WZ79 361 aa7.63□□□□□ -1.19
SHROOM4-203ENST00000460112 COL11A2P13942 1736 aaPredicted RBP7.63□□□□□ -1.19
SHROOM4-203ENST00000460112 PGFP49763 221 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 MVDP53602 400 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 LURAP1LQ8IV03 231 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 ZNF418Q8TF45 676 aaPredicted RBP7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 SMIM8Q96KF7 97 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 NXT2Q9NPJ8 142 aaKnown RBP7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 KLK13Q9UKR3 277 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 TRAV8-7A0A075B6U6 113 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 COL9A1P20849 921 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 GPX4P36969 197 aaPredicted RBP7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 GTSCR1Q86UQ5 136 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 SPCS1Q9Y6A9 102 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 MBNL2Q5VZF2 373 aaKnown RBP7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 ABHD12Q8N2K0 398 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 UCN2Q96RP3 112 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 TMEM242Q9NWH2 141 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 PLXNA4Q9HCM2 1894 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 PGPA6NDG6 321 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 LINC00614P0C842 121 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 HCP5Q6MZN7 132 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 CIARTQ8N365 385 aaPredicted RBP7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 A0A1B0GWB2 263 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 CGB1A6NKQ9 187 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 LINC00587B1AMM8 73 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 ACSF3Q4G176 576 aaPredicted RBP7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 LDLRAD2Q5SZI1 272 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 TAF15Q92804 592 aaKnown RBP eCLIP7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 MYEOVQ96EZ4 313 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 INSL4Q14641 139 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 FXYD3Q14802 87 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 FAM90A1Q86YD7 464 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 ITLN1Q8WWA0 313 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 GTF3AQ92664 365 aaKnown RBP7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 WBP1LQ9NX94 342 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 TMEM42Q69YG0 159 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 OR5A1Q8NGJ0 315 aa7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 SRSF12Q8WXF0 261 aaKnown RBP7.62□□□□□ -1.19
SHROOM4-203ENST00000460112 TRGV3P03979 118 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 RIPPLY3P57055 190 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 A0A1W2PPE3 182 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 PSMB11A5LHX3 300 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 A8MXK9 166 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 TDGF1P13385 188 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 PRSS12P56730 875 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 EAF1Q96JC9 268 aaPredicted RBP7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 IGKV3OR2-268A0A0C4DH90 116 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 CELA2BP08218 269 aaPredicted RBP7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 CCL4P13236 92 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 OR11H4Q8NGC9 324 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 AQP3Q92482 292 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 KCNS1Q96KK3 526 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 LIMS1P48059 325 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 TMEM170BQ5T4T1 132 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 CITED2Q99967 270 aaPredicted RBP7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 SPAARA0A1B0GVQ0 90 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 DXOO77932 396 aaKnown RBP7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 IGHMP01871 453 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 IL6RP08887 468 aaPredicted RBP7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 AGAP20933 346 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 OVOL2Q9BRP0 275 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 NPFFR1Q9GZQ6 430 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 IL9P15248 144 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 ZNF660Q6AZW8 331 aaPredicted RBP7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 HDHD3Q9BSH5 251 aaPredicted RBP7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 NDUFAF3Q9BU61 184 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 RRHO14718 337 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 NPIPB7O75200 414 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 APOBEC3AP31941 199 aaPredicted RBP7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 PSG4Q00888 419 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 GATAD1Q8WUU5 269 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 NEU1Q99519 415 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 SMOC1Q9H4F8 434 aa7.61□□□□□ -1.19
SHROOM4-203ENST00000460112 PARLQ9H300 379 aa7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 BEX4Q9NWD9 120 aaPredicted RBP7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 A0A1W2PPC1 479 aa7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 OSR1Q8TAX0 266 aaPredicted RBP7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 RGP1Q92546 391 aaPredicted RBP7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 SSBP3Q9BWW4 388 aaPredicted RBP7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 A0A1B0GTL3 188 aa7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 ATXN7O15265 892 aaPredicted RBP7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 CD5P06127 495 aa7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 VDAC2P45880 294 aaPredicted RBP7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 ASCL4Q6XD76 172 aa7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 SSTR5P35346 364 aa7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 TMEM86BQ8N661 226 aa7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 DPH3P1Q9H4G8 78 aa7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 FAM60AQ9NP50 221 aa7.6□□□□□ -1.19
SHROOM4-203ENST00000460112 DPRXA6NFQ7 191 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms