RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 HES1Q14469 280 aa19.55■□□□□ 0.72
U2AF1-204ENST00000459639 Q8N6K4 173 aa19.55■□□□□ 0.72
U2AF1-204ENST00000459639 TMED6Q8WW62 240 aa19.55■□□□□ 0.72
U2AF1-204ENST00000459639 SLC25A32Q9H2D1 315 aa19.55■□□□□ 0.72
U2AF1-204ENST00000459639 FBXL15Q9H469 300 aa19.55■□□□□ 0.72
U2AF1-204ENST00000459639 PJVKQ0ZLH3 352 aa19.54■□□□□ 0.72
U2AF1-204ENST00000459639 ATP6V1FQ16864 119 aa19.54■□□□□ 0.72
U2AF1-204ENST00000459639 RUSC1-AS1Q66K80 236 aa19.54■□□□□ 0.72
U2AF1-204ENST00000459639 KIAA1456Q9P272 454 aa19.54■□□□□ 0.72
U2AF1-204ENST00000459639 ACTL6BO94805 426 aa19.53■□□□□ 0.72
U2AF1-204ENST00000459639 IGHV4-31P0DP07 118 aa19.53■□□□□ 0.72
U2AF1-204ENST00000459639 CD24P25063 80 aa19.53■□□□□ 0.72
U2AF1-204ENST00000459639 NPY1RP25929 384 aa19.53■□□□□ 0.72
U2AF1-204ENST00000459639 ATP5IP56385 69 aaPredicted RBP19.53■□□□□ 0.72
U2AF1-204ENST00000459639 RAB11AP62491 216 aa19.53■□□□□ 0.72
U2AF1-204ENST00000459639 TMEM249Q2WGJ8 235 aa19.53■□□□□ 0.72
U2AF1-204ENST00000459639 FAM74A1Q5RGS3 127 aa19.53■□□□□ 0.72
U2AF1-204ENST00000459639 GCN1Q92616 2671 aaKnown RBP19.53■□□□□ 0.72
U2AF1-204ENST00000459639 IFNA5P01569 189 aa19.52■□□□□ 0.72
U2AF1-204ENST00000459639 HNF4GQ14541 408 aa19.52■□□□□ 0.72
U2AF1-204ENST00000459639 PLGLAQ15195 96 aa19.52■□□□□ 0.72
U2AF1-204ENST00000459639 C10orf55Q5SWW7 151 aa19.52■□□□□ 0.72
U2AF1-204ENST00000459639 MAPK1IP1LQ8NDC0 245 aa19.52■□□□□ 0.72
U2AF1-204ENST00000459639 IGHV3OR16-10A0A075B7F0 116 aa19.52■□□□□ 0.71
U2AF1-204ENST00000459639 CGB1A6NKQ9 187 aa19.52■□□□□ 0.71
U2AF1-204ENST00000459639 SEC11BP0C7V7 166 aa19.52■□□□□ 0.71
U2AF1-204ENST00000459639 FAM106CPP0CH98 169 aa19.52■□□□□ 0.71
U2AF1-204ENST00000459639 IGHV4-38-2P0DP08 117 aa19.52■□□□□ 0.71
U2AF1-204ENST00000459639 COMPP49747 757 aaPredicted RBP19.52■□□□□ 0.71
U2AF1-204ENST00000459639 TNXAQ16473 311 aa19.52■□□□□ 0.71
U2AF1-204ENST00000459639 HSD17B11Q8NBQ5 300 aa19.52■□□□□ 0.71
U2AF1-204ENST00000459639 TMEM170AQ8WVE7 144 aa19.52■□□□□ 0.71
U2AF1-204ENST00000459639 TMEM147Q9BVK8 224 aa19.52■□□□□ 0.71
U2AF1-204ENST00000459639 PARD6GQ9BYG4 376 aaPredicted RBP19.52■□□□□ 0.71
U2AF1-204ENST00000459639 FBXO24O75426 580 aa19.51■□□□□ 0.71
U2AF1-204ENST00000459639 TGFAP01135 160 aa19.51■□□□□ 0.71
U2AF1-204ENST00000459639 NMBP08949 121 aa19.51■□□□□ 0.71
U2AF1-204ENST00000459639 SPP1P10451 314 aa19.51■□□□□ 0.71
U2AF1-204ENST00000459639 TMEM11P17152 192 aa19.51■□□□□ 0.71
U2AF1-204ENST00000459639 RPL27AP46776 148 aaKnown RBP19.51■□□□□ 0.71
U2AF1-204ENST00000459639 BSXQ3C1V8 233 aa19.51■□□□□ 0.71
U2AF1-204ENST00000459639 ETV3LQ6ZN32 361 aa19.51■□□□□ 0.71
U2AF1-204ENST00000459639 OR10W1Q8NGF6 305 aa19.51■□□□□ 0.71
U2AF1-204ENST00000459639 E7EUB6 86 aa19.5■□□□□ 0.71
U2AF1-204ENST00000459639 ERHP84090 104 aaKnown RBP19.5■□□□□ 0.71
U2AF1-204ENST00000459639 FBLN7Q53RD9 439 aa19.5■□□□□ 0.71
U2AF1-204ENST00000459639 BRD3OSQ6XYD6 125 aa19.5■□□□□ 0.71
U2AF1-204ENST00000459639 MRPL41Q8IXM3 137 aaKnown RBP19.5■□□□□ 0.71
U2AF1-204ENST00000459639 LRRC20Q8TCA0 184 aa19.5■□□□□ 0.71
U2AF1-204ENST00000459639 A0A1B0GW64 132 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 CA2P00918 260 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 C5orf64Q2M2E5 130 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 VWC2Q2TAL6 325 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 SLC25A24Q6NUK1 477 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 RNF141Q8WVD5 230 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 PCNPQ8WW12 178 aaKnown RBP19.49■□□□□ 0.71
U2AF1-204ENST00000459639 GNPNAT1Q96EK6 184 aaPredicted RBP19.49■□□□□ 0.71
U2AF1-204ENST00000459639 CSMD2Q7Z408 3487 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 PRSS46E5RG02 174 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 AVPP01185 164 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 ATP6V0CP27449 155 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 C2orf83Q53S99 150 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 KLF17Q5JT82 389 aaPredicted RBP19.49■□□□□ 0.71
U2AF1-204ENST00000459639 GGACTQ9BVM4 153 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 MEGF9Q9H1U4 602 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 UQCC1Q9NVA1 299 aa19.49■□□□□ 0.71
U2AF1-204ENST00000459639 IFNA4P05014 189 aa19.48■□□□□ 0.71
U2AF1-204ENST00000459639 RNASE2P10153 161 aaKnown RBP19.48■□□□□ 0.71
U2AF1-204ENST00000459639 SNCAP37840 140 aa19.48■□□□□ 0.71
U2AF1-204ENST00000459639 LRRC75BQ2VPJ9 315 aa19.48■□□□□ 0.71
U2AF1-204ENST00000459639 FAM120AOSQ5T036 256 aa19.48■□□□□ 0.71
U2AF1-204ENST00000459639 SCGB1C1Q8TD33 95 aa19.48■□□□□ 0.71
U2AF1-204ENST00000459639 FOXC2Q99958 501 aa19.48■□□□□ 0.71
U2AF1-204ENST00000459639 SH3BGRL3Q9H299 93 aa19.48■□□□□ 0.71
U2AF1-204ENST00000459639 PRRC2AP48634 2157 aaKnown RBP19.48■□□□□ 0.71
U2AF1-204ENST00000459639 A0A0U1RQK1 487 aa19.47■□□□□ 0.71
U2AF1-204ENST00000459639 FGF16O43320 207 aa19.47■□□□□ 0.71
U2AF1-204ENST00000459639 SULT1A2P50226 295 aa19.47■□□□□ 0.71
U2AF1-204ENST00000459639 GNB1P62873 340 aa19.47■□□□□ 0.71
U2AF1-204ENST00000459639 SSBP2P81877 361 aaPredicted RBP19.47■□□□□ 0.71
U2AF1-204ENST00000459639 WT1-ASQ06250 92 aa19.47■□□□□ 0.71
U2AF1-204ENST00000459639 WDR61Q9GZS3 305 aaKnown RBP19.47■□□□□ 0.71
U2AF1-204ENST00000459639 C1RLQ9NZP8 487 aa19.47■□□□□ 0.71
U2AF1-204ENST00000459639 PLXNB1O43157 2135 aa19.47■□□□□ 0.71
U2AF1-204ENST00000459639 UBE2L5PA0A1B0GUS4 154 aa19.46■□□□□ 0.71
U2AF1-204ENST00000459639 LINC00862A6NCI5 91 aa19.46■□□□□ 0.71
U2AF1-204ENST00000459639 FCN1O00602 326 aa19.46■□□□□ 0.71
U2AF1-204ENST00000459639 FAM157CP0CG43 387 aa19.46■□□□□ 0.71
U2AF1-204ENST00000459639 DLK1P80370 383 aa19.46■□□□□ 0.71
U2AF1-204ENST00000459639 SRSF12Q8WXF0 261 aaKnown RBP19.46■□□□□ 0.71
U2AF1-204ENST00000459639 IGLC7A0M8Q6 106 aa19.46■□□□□ 0.71
U2AF1-204ENST00000459639 BPIFB3P59826 476 aa19.46■□□□□ 0.71
U2AF1-204ENST00000459639 HSD17B13Q7Z5P4 300 aaPredicted RBP19.46■□□□□ 0.71
U2AF1-204ENST00000459639 SLC7A5P1Q8MH63 180 aa19.46■□□□□ 0.71
U2AF1-204ENST00000459639 WFDC11Q8NEX6 87 aa19.46■□□□□ 0.71
U2AF1-204ENST00000459639 SRSF8Q9BRL6 282 aaKnown RBP19.46■□□□□ 0.71
U2AF1-204ENST00000459639 NCBP2LA6PVI3 153 aaKnown RBP19.45■□□□□ 0.7
U2AF1-204ENST00000459639 OR13C7P0DN81 318 aa19.45■□□□□ 0.7
U2AF1-204ENST00000459639 RUNX1Q01196 453 aa19.45■□□□□ 0.7
U2AF1-204ENST00000459639 FAM96BQ9Y3D0 163 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms