RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 MFSD2BA6NFX1 497 aa16.1■□□□□ 0.17
HMGB3-205ENST00000455596 RGS5O15539 181 aa16.1■□□□□ 0.17
HMGB3-205ENST00000455596 SERPINE2P07093 398 aa16.1■□□□□ 0.17
HMGB3-205ENST00000455596 OR13C7P0DN81 318 aa16.1■□□□□ 0.17
HMGB3-205ENST00000455596 GDPD1Q8N9F7 314 aa16.1■□□□□ 0.17
HMGB3-205ENST00000455596 LSM10Q969L4 123 aaKnown RBP16.1■□□□□ 0.17
HMGB3-205ENST00000455596 ABHD1Q96SE0 405 aa16.1■□□□□ 0.17
HMGB3-205ENST00000455596 TSC22D3Q99576 134 aa16.1■□□□□ 0.17
HMGB3-205ENST00000455596 HINT2Q9BX68 163 aa16.1■□□□□ 0.17
HMGB3-205ENST00000455596 NDUFA4L2Q9NRX3 87 aa16.1■□□□□ 0.17
HMGB3-205ENST00000455596 FKBP11Q9NYL4 201 aa16.1■□□□□ 0.17
HMGB3-205ENST00000455596 MTFP1Q9UDX5 166 aa16.1■□□□□ 0.17
HMGB3-205ENST00000455596 PRNDQ9UKY0 176 aa16.1■□□□□ 0.17
HMGB3-205ENST00000455596 IZUMO1RA6ND01 250 aa16.09■□□□□ 0.17
HMGB3-205ENST00000455596 C2orf70A6NJV1 201 aa16.09■□□□□ 0.17
HMGB3-205ENST00000455596 A8MZ25 164 aa16.09■□□□□ 0.17
HMGB3-205ENST00000455596 CD3DP04234 171 aa16.09■□□□□ 0.17
HMGB3-205ENST00000455596 TBPP20226 339 aa16.09■□□□□ 0.17
HMGB3-205ENST00000455596 PTBP1P26599 531 aaKnown RBP eCLIP16.09■□□□□ 0.17
HMGB3-205ENST00000455596 WT1-ASQ06250 92 aa16.09■□□□□ 0.17
HMGB3-205ENST00000455596 SPCS2Q15005 226 aa16.09■□□□□ 0.17
HMGB3-205ENST00000455596 FAM106AQ4KMX7 169 aa16.09■□□□□ 0.17
HMGB3-205ENST00000455596 ADAMTSL5Q6ZMM2 481 aa16.09■□□□□ 0.17
HMGB3-205ENST00000455596 CLVS1Q8IUQ0 354 aaPredicted RBP16.09■□□□□ 0.17
HMGB3-205ENST00000455596 ARRDC1Q8N5I2 433 aa16.09■□□□□ 0.17
HMGB3-205ENST00000455596 MIXL1Q9H2W2 232 aa16.09■□□□□ 0.17
HMGB3-205ENST00000455596 DNAH9Q9NYC9 4486 aa16.08■□□□□ 0.17
HMGB3-205ENST00000455596 CLEC3BP05452 202 aa16.08■□□□□ 0.16
HMGB3-205ENST00000455596 PGAM2P15259 253 aa16.08■□□□□ 0.16
HMGB3-205ENST00000455596 OR5B3Q8NH48 314 aa16.08■□□□□ 0.16
HMGB3-205ENST00000455596 RAB2BQ8WUD1 216 aa16.08■□□□□ 0.16
HMGB3-205ENST00000455596 ZNF486Q96H40 463 aaPredicted RBP16.08■□□□□ 0.16
HMGB3-205ENST00000455596 TMEM56Q96MV1 263 aa16.08■□□□□ 0.16
HMGB3-205ENST00000455596 THAP7Q9BT49 309 aaPredicted RBP16.08■□□□□ 0.16
HMGB3-205ENST00000455596 ZMAT4Q9H898 229 aa16.08■□□□□ 0.16
HMGB3-205ENST00000455596 C19orf73Q9NVV2 129 aa16.08■□□□□ 0.16
HMGB3-205ENST00000455596 C15orf61A6NNL5 157 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 FOLR2P14207 255 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 RND3P61587 244 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 CD300EQ496F6 205 aaPredicted RBP16.07■□□□□ 0.16
HMGB3-205ENST00000455596 SLC25A24Q6NUK1 477 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 H2BFWTQ7Z2G1 175 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 LHFPL1Q86WI0 220 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 LAX1Q8IWV1 398 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 TMEM229BQ8NBD8 167 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 ZNF502Q8TBZ5 544 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 VN1R17PQ8TDU5 208 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 SEC22AQ96IW7 307 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 RCHY1Q96PM5 261 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 TMEM14BQ9NUH8 114 aa16.07■□□□□ 0.16
HMGB3-205ENST00000455596 F11RQ9Y624 299 aaKnown RBP16.07■□□□□ 0.16
HMGB3-205ENST00000455596 ZNF320A2RRD8 509 aa16.06■□□□□ 0.16
HMGB3-205ENST00000455596 CTDSP2O14595 271 aa16.06■□□□□ 0.16
HMGB3-205ENST00000455596 EDN2P20800 178 aa16.06■□□□□ 0.16
HMGB3-205ENST00000455596 GPR183P32249 361 aa16.06■□□□□ 0.16
HMGB3-205ENST00000455596 TAS2R19P59542 299 aa16.06■□□□□ 0.16
HMGB3-205ENST00000455596 DEFB114Q30KQ6 69 aa16.06■□□□□ 0.16
HMGB3-205ENST00000455596 BCL7BQ9BQE9 202 aa16.06■□□□□ 0.16
HMGB3-205ENST00000455596 ZC4H2Q9NQZ6 224 aa16.06■□□□□ 0.16
HMGB3-205ENST00000455596 TECRQ9NZ01 308 aaKnown RBP16.06■□□□□ 0.16
HMGB3-205ENST00000455596 A8MWP6 167 aa16.05■□□□□ 0.16
HMGB3-205ENST00000455596 GABARAPH6UMI1 98 aa16.05■□□□□ 0.16
HMGB3-205ENST00000455596 IGKV1-39P01597 117 aa16.05■□□□□ 0.16
HMGB3-205ENST00000455596 CD74P04233 296 aa16.05■□□□□ 0.16
HMGB3-205ENST00000455596 IGKV1D-39P04432 117 aa16.05■□□□□ 0.16
HMGB3-205ENST00000455596 CBLN1P23435 193 aa16.05■□□□□ 0.16
HMGB3-205ENST00000455596 TMBIM6P55061 237 aa16.05■□□□□ 0.16
HMGB3-205ENST00000455596 PIGPP57054 158 aa16.05■□□□□ 0.16
HMGB3-205ENST00000455596 MRPS10P82664 201 aaKnown RBP16.05■□□□□ 0.16
HMGB3-205ENST00000455596 PLET1Q6UQ28 207 aa16.05■□□□□ 0.16
HMGB3-205ENST00000455596 OR4A16Q8NH70 328 aa16.05■□□□□ 0.16
HMGB3-205ENST00000455596 MRGPRFQ96AM1 343 aa16.05■□□□□ 0.16
HMGB3-205ENST00000455596 DBX1A6NMT0 343 aa16.04■□□□□ 0.16
HMGB3-205ENST00000455596 RAB3DO95716 219 aa16.04■□□□□ 0.16
HMGB3-205ENST00000455596 PI3P19957 117 aa16.04■□□□□ 0.16
HMGB3-205ENST00000455596 PPP5CP53041 499 aa16.04■□□□□ 0.16
HMGB3-205ENST00000455596 SSBP1Q04837 148 aaKnown RBP16.04■□□□□ 0.16
HMGB3-205ENST00000455596 OR4D10Q8NGI6 311 aa16.04■□□□□ 0.16
HMGB3-205ENST00000455596 OR1L6Q8NGR2 347 aa16.04■□□□□ 0.16
HMGB3-205ENST00000455596 DYNC2LI1Q8TCX1 351 aa16.04■□□□□ 0.16
HMGB3-205ENST00000455596 TUBA4BQ9H853 241 aa16.04■□□□□ 0.16
HMGB3-205ENST00000455596 PALMDQ9NP74 551 aa16.04■□□□□ 0.16
HMGB3-205ENST00000455596 CCDC59Q9P031 241 aaKnown RBP16.04■□□□□ 0.16
HMGB3-205ENST00000455596 TMEM213A2RRL7 107 aa16.03■□□□□ 0.16
HMGB3-205ENST00000455596 ZNF785A8K8V0 405 aa16.03■□□□□ 0.16
HMGB3-205ENST00000455596 MFAP2P55001 183 aa16.03■□□□□ 0.16
HMGB3-205ENST00000455596 CD81P60033 236 aa16.03■□□□□ 0.16
HMGB3-205ENST00000455596 SCGB2B2Q4G0G5 96 aa16.03■□□□□ 0.16
HMGB3-205ENST00000455596 STEAP1BQ6NZ63 245 aa16.03■□□□□ 0.16
HMGB3-205ENST00000455596 TERB2Q8NHR7 220 aa16.03■□□□□ 0.16
HMGB3-205ENST00000455596 ZFAND1Q8TCF1 268 aa16.03■□□□□ 0.16
HMGB3-205ENST00000455596 CACNG8Q8WXS5 425 aa16.03■□□□□ 0.16
HMGB3-205ENST00000455596 TM2D3Q9BRN9 247 aa16.03■□□□□ 0.16
HMGB3-205ENST00000455596 SLC2A8Q9NY64 477 aa16.03■□□□□ 0.16
HMGB3-205ENST00000455596 TGOLN2O43493 480 aa16.02■□□□□ 0.16
HMGB3-205ENST00000455596 NOL3O60936 208 aaKnown RBP16.02■□□□□ 0.16
HMGB3-205ENST00000455596 RPL5P46777 297 aaKnown RBP16.02■□□□□ 0.16
HMGB3-205ENST00000455596 CCDC71LQ8N9Z2 235 aa16.02■□□□□ 0.16
HMGB3-205ENST00000455596 DIRAS2Q96HU8 199 aa16.02■□□□□ 0.16
HMGB3-205ENST00000455596 TP53RKQ96S44 253 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms