RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 MRPL41Q8IXM3 137 aaKnown RBP8.87□□□□□ -0.99
TRAF4-206ENST00000454852 ZNF114Q8NC26 417 aa8.87□□□□□ -0.99
TRAF4-206ENST00000454852 CLCC1Q96S66 551 aa8.87□□□□□ -0.99
TRAF4-206ENST00000454852 C11orf1Q9H5F2 150 aa8.87□□□□□ -0.99
TRAF4-206ENST00000454852 TNFRSF19Q9NS68 423 aa8.87□□□□□ -0.99
TRAF4-206ENST00000454852 FBXO7Q9Y3I1 522 aa8.87□□□□□ -0.99
TRAF4-206ENST00000454852 TET2Q6N021 2002 aaPredicted RBP8.87□□□□□ -0.99
TRAF4-206ENST00000454852 LINC01548A6NM66 108 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 NPIPB5A8MRT5 1133 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 ATP6V0E1O15342 81 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 SYNGR2O43760 224 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 CNIH1O95406 144 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 IFNA17P01571 189 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 MBPP02686 304 aaPredicted RBP8.86□□□□□ -0.99
TRAF4-206ENST00000454852 MYOD1P15172 320 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 TAS2R30P59541 319 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 CFHR3Q02985 330 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 TMEM267Q0VDI3 215 aaPredicted RBP8.86□□□□□ -0.99
TRAF4-206ENST00000454852 BSXQ3C1V8 233 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 ASPHD1Q5U4P2 390 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 PVRIGQ6DKI7 326 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 TTC9CQ8N5M4 171 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 CIB3Q96Q77 187 aaPredicted RBP8.86□□□□□ -0.99
TRAF4-206ENST00000454852 RAB40CQ96S21 281 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 PLEKHA3Q9HB20 300 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 RCL1Q9Y2P8 373 aaKnown RBP8.86□□□□□ -0.99
TRAF4-206ENST00000454852 PLXNB1O43157 2135 aa8.86□□□□□ -0.99
TRAF4-206ENST00000454852 MSGN1A6NI15 193 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 SH2D7A6NKC9 451 aaPredicted RBP8.85□□□□□ -0.99
TRAF4-206ENST00000454852 K7EPK0 472 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 CRYBA1P05813 215 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 LYL1P12980 280 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 PSMB6P28072 239 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 PPIFP30405 207 aaKnown RBP8.85□□□□□ -0.99
TRAF4-206ENST00000454852 GNB1P62873 340 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 WT1-ASQ06250 92 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 OR2C3Q8N628 320 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 DTD1Q8TEA8 209 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 PPP1R1CQ8WVI7 109 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 SMIM8Q96KF7 97 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 GON7Q9BXV9 100 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 WNT10AQ9GZT5 417 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 RBKSQ9H477 322 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 PARP11Q9NR21 331 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 SERTAD4Q9NUC0 356 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 GSKIPQ9P0R6 139 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 WSB1Q9Y6I7 421 aa8.85□□□□□ -0.99
TRAF4-206ENST00000454852 TRAV41A0A0B4J266 112 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 TMEM89A2RUT3 159 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 H3BUA1 57 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 DEDDO75618 318 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 MPC2O95563 127 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 OPN1MWP04001 364 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 PET100P0DJ07 73 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 OPN1MW2P0DN77 364 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 OPN1MW3P0DN78 364 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 HKR1P10072 659 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 CTRB1P17538 263 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 PAX9P55771 341 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 POLR2GP62487 172 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRAF4-206ENST00000454852 ERHP84090 104 aaKnown RBP8.84□□□□□ -0.99
TRAF4-206ENST00000454852 FGL1Q08830 312 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 RAB32Q13637 225 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 C9orf152Q5JTZ5 239 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 CTRB2Q6GPI1 263 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 PRSS54Q6PEW0 395 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 AKAP14Q86UN6 197 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 TCTE3Q8IZS6 198 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 STPG2Q8N412 459 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 LFNGQ8NES3 379 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 OR10W1Q8NGF6 305 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 OR1L6Q8NGR2 347 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 OR2T6Q8NHC8 308 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 GRPEL2Q8TAA5 225 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 FAM110DQ8TAY7 271 aaPredicted RBP8.84□□□□□ -0.99
TRAF4-206ENST00000454852 WIPF2Q8TF74 440 aaPredicted RBP8.84□□□□□ -0.99
TRAF4-206ENST00000454852 WDR89Q96FK6 387 aaPredicted RBP8.84□□□□□ -0.99
TRAF4-206ENST00000454852 ST6GAL2Q96JF0 529 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 FAM103A1Q9BTL3 118 aaKnown RBP8.84□□□□□ -0.99
TRAF4-206ENST00000454852 HIPK2Q9H2X6 1198 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 U3KQ87 197 aa8.84□□□□□ -0.99
TRAF4-206ENST00000454852 A0A1B0GUS0 222 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 CEBPZOSA8MTT3 80 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 G3V3Q6 166 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 H0YIZ8 118 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 WRBO00258 174 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 TSC22D2O75157 780 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 TMEM50AO95807 157 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 IGLV1-40P01703 118 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 AREGP15514 252 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 HTR2BP41595 481 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 HOXA1P49639 335 aaPredicted RBP8.83□□□□□ -1
TRAF4-206ENST00000454852 OR1P1Q8NH06 330 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 OR4F5Q8NH21 305 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 RNF126Q9BV68 326 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 ENY2Q9NPA8 101 aa8.83□□□□□ -1
TRAF4-206ENST00000454852 NIPBLQ6KC79 2804 aaeCLIP8.83□□□□□ -19e-12■□□□□ 10.1
TRAF4-206ENST00000454852 TRAV14DV4A0A0A6YYC5 116 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 E5RGE8 158 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 G3V318 75 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms