RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 RTN4RQ9BZR6 473 aa10.18□□□□□ -0.78
SEC16A-207ENST00000453963 LAMTOR2Q9Y2Q5 125 aa10.18□□□□□ -0.78
SEC16A-207ENST00000453963 MDC1Q14676 2089 aaKnown RBP10.18□□□□□ -0.78
SEC16A-207ENST00000453963 IGKV1-9A0A0C4DH69 117 aa10.18□□□□□ -0.78
SEC16A-207ENST00000453963 ZNF324BQ6AW86 544 aaPredicted RBP10.18□□□□□ -0.78
SEC16A-207ENST00000453963 NIT1Q86X76 327 aa10.18□□□□□ -0.78
SEC16A-207ENST00000453963 SYT8Q8NBV8 401 aa10.18□□□□□ -0.78
SEC16A-207ENST00000453963 MBD3L1Q8WWY6 194 aa10.18□□□□□ -0.78
SEC16A-207ENST00000453963 HIST1H2BLQ99880 126 aa10.18□□□□□ -0.78
SEC16A-207ENST00000453963 A0A1B0GW64 132 aa10.18□□□□□ -0.78
SEC16A-207ENST00000453963 WNT9BO14905 357 aa10.18□□□□□ -0.78
SEC16A-207ENST00000453963 FCGR2BP31994 310 aaPredicted RBP10.18□□□□□ -0.78
SEC16A-207ENST00000453963 GTF3AQ92664 365 aaKnown RBP10.18□□□□□ -0.78
SEC16A-207ENST00000453963 CREBBPQ92793 2442 aa10.18□□□□□ -0.78
SEC16A-207ENST00000453963 FOXA3P55318 350 aaPredicted RBP10.18□□□□□ -0.78
SEC16A-207ENST00000453963 LHFPL1Q86WI0 220 aa10.18□□□□□ -0.78
SEC16A-207ENST00000453963 DDB2Q92466 427 aa10.18□□□□□ -0.78
SEC16A-207ENST00000453963 C17orf98A8MV24 154 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 PROB1E7EW31 1015 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 SERF1AO75920 110 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 NUDT3O95989 172 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 SMIM13P0DJ93 91 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 HIST3H2BBQ8N257 126 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 OR4D5Q8NGN0 318 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 IFI27L2Q9H2X8 130 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 GP6Q9HCN6 339 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 ZNF324O75467 553 aaPredicted RBP10.17□□□□□ -0.78
SEC16A-207ENST00000453963 ANOS1P23352 680 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 TFPI2P48307 235 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 GOLT1AQ6ZVE7 132 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.17□□□□□ -0.78
SEC16A-207ENST00000453963 FAM131CQ96AQ9 280 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 RNF115Q9Y4L5 304 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 SIPA1L1O43166 1804 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 PRR19A6NJB7 356 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 C19orf54Q5BKX5 351 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 FDCSPQ8NFU4 85 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 ZNF414Q96IQ9 312 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 SGK494Q96LW2 274 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 NRN1Q9NPD7 142 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 PPIAL4CA0A0B4J2A2 164 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 PPIAL4GP0DN37 164 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 RAB9AP51151 201 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 CCL20P78556 96 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 ZNF124Q15973 351 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 WFDC1Q9HC57 220 aa10.17□□□□□ -0.78
SEC16A-207ENST00000453963 BRCA1P38398 1863 aaKnown RBP10.16□□□□□ -0.78
SEC16A-207ENST00000453963 GDF9O60383 454 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 NBEAP1P0C6P0 100 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 SAPCD1Q5SSQ6 148 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 OSR1Q8TAX0 266 aaPredicted RBP10.16□□□□□ -0.78
SEC16A-207ENST00000453963 IZUMO1RA6ND01 250 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 ATXN7O15265 892 aaPredicted RBP10.16□□□□□ -0.78
SEC16A-207ENST00000453963 RSPO4Q2I0M5 234 aaPredicted RBP10.16□□□□□ -0.78
SEC16A-207ENST00000453963 FAM106AQ4KMX7 169 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 LINC00305Q7Z4B0 112 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 AKIRIN1Q9H9L7 192 aaPredicted RBP10.16□□□□□ -0.78
SEC16A-207ENST00000453963 F11RQ9Y624 299 aaKnown RBP10.16□□□□□ -0.78
SEC16A-207ENST00000453963 WDR90Q96KV7 1748 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 ABCA4P78363 2273 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 PEX7O00628 323 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 LDLRAD4O15165 306 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 IGFBP2P18065 325 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 RNFT1Q5M7Z0 435 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 FADS6Q8N9I5 356 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 LEAP2Q969E1 77 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 COX6B1P14854 86 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 SRSF4Q08170 494 aaKnown RBP10.16□□□□□ -0.78
SEC16A-207ENST00000453963 AMMECR1LQ6DCA0 310 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 ACP7Q6ZNF0 438 aa10.16□□□□□ -0.78
SEC16A-207ENST00000453963 EAF1Q96JC9 268 aaPredicted RBP10.16□□□□□ -0.78
SEC16A-207ENST00000453963 A0A0A6YYD4 124 aa10.15□□□□□ -0.78
SEC16A-207ENST00000453963 TRAV1-1A0A0B4J248 108 aa10.15□□□□□ -0.78
SEC16A-207ENST00000453963 RALGAPA2Q2PPJ7 1873 aa10.15□□□□□ -0.78
SEC16A-207ENST00000453963 TIMP4Q99727 224 aa10.15□□□□□ -0.78
SEC16A-207ENST00000453963 BDP1A6H8Y1 2624 aa10.15□□□□□ -0.78
SEC16A-207ENST00000453963 IGKV1D-13A0A0B4J2D9 117 aa10.15□□□□□ -0.78
SEC16A-207ENST00000453963 C7orf71A4D174 169 aa10.15□□□□□ -0.78
SEC16A-207ENST00000453963 LINC00271P0C7V0 271 aa10.15□□□□□ -0.78
SEC16A-207ENST00000453963 IGKV1-13P0DP09 117 aa10.15□□□□□ -0.78
SEC16A-207ENST00000453963 GFRA1P56159 465 aa10.15□□□□□ -0.78
SEC16A-207ENST00000453963 RPL39P5Q59GN2 51 aa10.15□□□□□ -0.78
SEC16A-207ENST00000453963 CACNG8Q8WXS5 425 aa10.15□□□□□ -0.78
SEC16A-207ENST00000453963 A0A1B0GW15 77 aa10.15□□□□□ -0.79
SEC16A-207ENST00000453963 CEACAM1P13688 526 aa10.15□□□□□ -0.79
SEC16A-207ENST00000453963 RRN3P1Q2M238 152 aa10.15□□□□□ -0.79
SEC16A-207ENST00000453963 CHODLQ9H9P2 273 aa10.15□□□□□ -0.79
SEC16A-207ENST00000453963 CLDN16Q9Y5I7 305 aa10.15□□□□□ -0.79
SEC16A-207ENST00000453963 DIDO1Q9BTC0 2240 aaKnown RBP10.15□□□□□ -0.79
SEC16A-207ENST00000453963 A0A1B0GUT8 65 aa10.14□□□□□ -0.79
SEC16A-207ENST00000453963 PHLDA3Q9Y5J5 127 aa10.14□□□□□ -0.79
SEC16A-207ENST00000453963 RBFOX2O43251 390 aaKnown RBP eCLIP10.14□□□□□ -0.792e-7■■□□□ 12.8
SEC16A-207ENST00000453963 SUPT4H1P63272 117 aaKnown RBP10.14□□□□□ -0.79
SEC16A-207ENST00000453963 CX3CL1P78423 397 aa10.14□□□□□ -0.79
SEC16A-207ENST00000453963 MBNL2Q5VZF2 373 aaKnown RBP10.14□□□□□ -0.79
SEC16A-207ENST00000453963 FAM166AQ6J272 317 aa10.14□□□□□ -0.79
SEC16A-207ENST00000453963 CLEC7AQ9BXN2 247 aa10.14□□□□□ -0.79
SEC16A-207ENST00000453963 OR11H12B2RN74 326 aa10.14□□□□□ -0.79
SEC16A-207ENST00000453963 H3BTX0 84 aa10.14□□□□□ -0.79
SEC16A-207ENST00000453963 C1QTNF9P0C862 333 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms