RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 DCHS2Q6V1P9 2916 aa13.01□□□□□ -0.33
SNX17-204ENST00000453453 IGKV1D-13A0A0B4J2D9 117 aa13□□□□□ -0.33
SNX17-204ENST00000453453 XKRY2A2RUG3 117 aa13□□□□□ -0.33
SNX17-204ENST00000453453 TCAPO15273 167 aa13□□□□□ -0.33
SNX17-204ENST00000453453 SERPINE2P07093 398 aa13□□□□□ -0.33
SNX17-204ENST00000453453 IGKV1-13P0DP09 117 aa13□□□□□ -0.33
SNX17-204ENST00000453453 GNB2P62879 340 aa13□□□□□ -0.33
SNX17-204ENST00000453453 MEF2BQ02080 365 aaPredicted RBP13□□□□□ -0.33
SNX17-204ENST00000453453 HERPUD1Q15011 391 aa13□□□□□ -0.33
SNX17-204ENST00000453453 ATP6V1FQ16864 119 aa13□□□□□ -0.33
SNX17-204ENST00000453453 ZNF664Q8N3J9 261 aa13□□□□□ -0.33
SNX17-204ENST00000453453 FGFRL1Q8N441 504 aa13□□□□□ -0.33
SNX17-204ENST00000453453 OR1L1Q8NH94 360 aa13□□□□□ -0.33
SNX17-204ENST00000453453 CORO2AQ92828 525 aa13□□□□□ -0.33
SNX17-204ENST00000453453 CALYQ9NYX4 217 aa13□□□□□ -0.33
SNX17-204ENST00000453453 GCN1Q92616 2671 aaKnown RBP13□□□□□ -0.33
SNX17-204ENST00000453453 CD99P14209 185 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 SSTR5P35346 364 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 GALR1P47211 349 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 PSMB3P49720 205 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 KRTAP10-9P60411 292 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 HTD2P86397 168 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 TMEM30BQ3MIR4 351 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 UBALD1Q8TB05 177 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 C10orf105Q8TEF2 133 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 IMMP2LQ96T52 175 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 BPESC1Q9GZL8 116 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 PSENENQ9NZ42 101 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 GAB2Q9UQC2 676 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 OR2W1Q9Y3N9 320 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 DOCK11Q5JSL3 2073 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 IGKV1-6A0A0C4DH72 117 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 KBTBD11-OT1A0A1B0GTJ5 212 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 CTXND1A0A1B0GTU2 59 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 C15orf65H3BRN8 121 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 RPL23P62829 140 aaKnown RBP12.99□□□□□ -0.33
SNX17-204ENST00000453453 TMEM267Q0VDI3 215 aaPredicted RBP12.99□□□□□ -0.33
SNX17-204ENST00000453453 ADIRFQ15847 76 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 KCNIP4Q6PIL6 250 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 LCN15Q6UWW0 184 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 ZNF841Q6ZN19 808 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 C5orf24Q7Z6I8 188 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 RFESDQ8TAC1 157 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 ZNF714Q96N38 554 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 RSG1Q9BU20 258 aa12.99□□□□□ -0.33
SNX17-204ENST00000453453 SSBP3Q9BWW4 388 aaPredicted RBP12.99□□□□□ -0.33
SNX17-204ENST00000453453 M0QZK8 103 aa12.98□□□□□ -0.33
SNX17-204ENST00000453453 SOX15O60248 233 aa12.98□□□□□ -0.33
SNX17-204ENST00000453453 HIST2H2BCQ6DN03 193 aa12.98□□□□□ -0.33
SNX17-204ENST00000453453 LRRC75A-AS1Q8N1F1 130 aa12.98□□□□□ -0.33
SNX17-204ENST00000453453 TAF15Q92804 592 aaKnown RBP eCLIP12.98□□□□□ -0.33
SNX17-204ENST00000453453 SLC39A9Q9NUM3 307 aa12.98□□□□□ -0.33
SNX17-204ENST00000453453 LIN7CQ9NUP9 197 aaKnown RBP12.98□□□□□ -0.33
SNX17-204ENST00000453453 OR1A1Q9P1Q5 309 aa12.98□□□□□ -0.33
SNX17-204ENST00000453453 GNG12Q9UBI6 72 aa12.98□□□□□ -0.33
SNX17-204ENST00000453453 JPT1Q9UK76 154 aa12.98□□□□□ -0.33
SNX17-204ENST00000453453 ARID1AO14497 2285 aa12.98□□□□□ -0.33
SNX17-204ENST00000453453 F2RL2O00254 374 aa12.97□□□□□ -0.33
SNX17-204ENST00000453453 FCN3O75636 299 aa12.97□□□□□ -0.33
SNX17-204ENST00000453453 CGB3P0DN86 165 aa12.97□□□□□ -0.33
SNX17-204ENST00000453453 CGB7P0DN87 165 aa12.97□□□□□ -0.33
SNX17-204ENST00000453453 DEFB113Q30KQ7 82 aa12.97□□□□□ -0.33
SNX17-204ENST00000453453 TMEM200BQ69YZ2 307 aa12.97□□□□□ -0.33
SNX17-204ENST00000453453 OR2T10Q8NGZ9 312 aa12.97□□□□□ -0.33
SNX17-204ENST00000453453 LHX4Q969G2 390 aa12.97□□□□□ -0.33
SNX17-204ENST00000453453 R3HDM4Q96D70 268 aa12.97□□□□□ -0.33
SNX17-204ENST00000453453 TMEM68Q96MH6 324 aa12.97□□□□□ -0.33
SNX17-204ENST00000453453 RBKSQ9H477 322 aa12.97□□□□□ -0.33
SNX17-204ENST00000453453 IDI2-AS1Q9NZ38 188 aa12.97□□□□□ -0.33
SNX17-204ENST00000453453 RBM7Q9Y580 266 aaKnown RBP12.97□□□□□ -0.33
SNX17-204ENST00000453453 KIR2DL5BA0A0G2JN68 375 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 KIR2DL5BA0A0G2JPC4 375 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 A0A0G2JRQ6 117 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 RNF212BA8MTL3 300 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 USF2Q15853 346 aaPredicted RBP12.96□□□□□ -0.33
SNX17-204ENST00000453453 LTC4SQ16873 150 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 C17orf58Q2M2W7 97 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 TMEM249Q2WGJ8 235 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 BTNL3Q6UXE8 466 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 ZNF66Q6ZN08 573 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 TCF23Q7RTU1 214 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 TGIF2LXQ8IUE1 241 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 KIR2DL5AQ8N109 375 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 OR52L2PQ8NGH6 319 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 RPUSD1Q9UJJ7 312 aaKnown RBP12.96□□□□□ -0.33
SNX17-204ENST00000453453 SPG11Q96JI7 2443 aa12.96□□□□□ -0.33
SNX17-204ENST00000453453 SLC25A16P16260 332 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 ERVFC1-1P60608 527 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 CLEC12BQ2HXU8 276 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 C1orf194Q5T5A4 169 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 TMEM14EPQ6UXP3 125 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 HAPLN4Q86UW8 402 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 GBGT1Q8N5D6 347 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 OR10V1Q8NGI7 309 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 C8orf46Q8TAG6 207 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 LINC00574Q9H8X3 128 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 ANKRD17O75179 2603 aaKnown RBP12.95□□□□□ -0.34
SNX17-204ENST00000453453 YLPM1P49750 1951 aaKnown RBP12.95□□□□□ -0.34
SNX17-204ENST00000453453 FASNP49327 2511 aaKnown RBP12.95□□□□□ -0.34
SNX17-204ENST00000453453 LOC105371242A0A075B767 164 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 296.7 ms