RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 MECP2P51608 486 aaKnown RBP6.83□□□□□ -1.32
COL28A1-205ENST00000453441 SUPT4H1P63272 117 aaKnown RBP6.83□□□□□ -1.32
COL28A1-205ENST00000453441 SSBP2P81877 361 aaPredicted RBP6.83□□□□□ -1.32
COL28A1-205ENST00000453441 NDPQ00604 133 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 PJVKQ0ZLH3 352 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 TMEM187Q14656 261 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 ECSCRQ19T08 205 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 MRGPRG-AS1Q2M3A8 158 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 TMEM268Q5VZI3 342 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 TMEM65Q6PI78 240 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 OR1L8Q8NGR8 309 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 COQ8AQ8NI60 647 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 FAM110DQ8TAY7 271 aaPredicted RBP6.83□□□□□ -1.32
COL28A1-205ENST00000453441 TAF15Q92804 592 aaKnown RBP eCLIP6.83□□□□□ -1.32
COL28A1-205ENST00000453441 NOL4LQ96MY1 436 aaPredicted RBP6.83□□□□□ -1.32
COL28A1-205ENST00000453441 PDCD10Q9BUL8 212 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 QTRT1Q9BXR0 403 aaKnown RBP6.83□□□□□ -1.32
COL28A1-205ENST00000453441 TMEM14BQ9NUH8 114 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 COA4Q9NYJ1 87 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 SHPKQ9UHJ6 478 aa6.83□□□□□ -1.32
COL28A1-205ENST00000453441 TSSC4Q9Y5U2 329 aaPredicted RBP6.83□□□□□ -1.32
COL28A1-205ENST00000453441 A0A1W2PN81 502 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 MSGN1A6NI15 193 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 LINC01548A6NM66 108 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 NPIPB5A8MRT5 1133 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 DUS4LO95620 317 aaKnown RBP6.82□□□□□ -1.32
COL28A1-205ENST00000453441 HLA-AP01891 365 aaKnown RBP6.82□□□□□ -1.32
COL28A1-205ENST00000453441 OR4E1P0C645 316 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 OR9G9P0C7N8 305 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 P0C879 139 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 TRAPPC2P0DI81 140 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 TRAPPC2BP0DI82 140 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 EGR2P11161 476 aaPredicted RBP6.82□□□□□ -1.32
COL28A1-205ENST00000453441 PSMB8P28062 276 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 CHRNA7P36544 502 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 OR2B8PP59922 312 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 CD83Q01151 205 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 PPP1R1AQ13522 171 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 C2orf68Q2NKX9 166 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 SP6Q3SY56 376 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 AARDQ4LEZ3 155 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 C4orf46Q504U0 113 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 FAM209BQ5JX69 171 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 LYG2Q86SG7 212 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 SELENOHQ8IZQ5 122 aaKnown RBP6.82□□□□□ -1.32
COL28A1-205ENST00000453441 TTC9CQ8N5M4 171 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 DUSP18Q8NEJ0 188 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 LFNGQ8NES3 379 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 OR1L6Q8NGR2 347 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 RBMXL1Q96E39 390 aaKnown RBP6.82□□□□□ -1.32
COL28A1-205ENST00000453441 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.82□□□□□ -1.32
COL28A1-205ENST00000453441 NUDT15Q9NV35 164 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 FBXO7Q9Y3I1 522 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 TMED3Q9Y3Q3 217 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 OR51B2Q9Y5P1 312 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 WSB1Q9Y6I7 421 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 TET2Q6N021 2002 aaPredicted RBP6.82□□□□□ -1.32
COL28A1-205ENST00000453441 DNHD1Q96M86 4753 aa6.82□□□□□ -1.32
COL28A1-205ENST00000453441 A0A0G2JLM5 398 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 TCRBV4S1A1TA0A5B7 111 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 C9orf170A2RU37 121 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 DBX1A6NMT0 343 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 INS-IGF2F8WCM5 200 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 G3V318 75 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 PRAF2O60831 178 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 RBMXL2O75526 392 aaKnown RBP6.81□□□□□ -1.32
COL28A1-205ENST00000453441 PTTG1O95997 202 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 IGKV1-5P01602 117 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 CRYGCP07315 174 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 SULT1A3P0DMM9 295 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 SULT1A4P0DMN0 295 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 PF4V1P10720 104 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 SLC25A6P12236 298 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 HIST1H1BP16401 226 aaKnown RBP6.81□□□□□ -1.32
COL28A1-205ENST00000453441 CDX1P47902 265 aaPredicted RBP6.81□□□□□ -1.32
COL28A1-205ENST00000453441 HSPE1P61604 102 aaKnown RBP6.81□□□□□ -1.32
COL28A1-205ENST00000453441 RPL23AP62750 156 aaKnown RBP6.81□□□□□ -1.32
COL28A1-205ENST00000453441 IFITM3Q01628 133 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 DHRS2Q13268 280 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 KLK9Q2XQG4 91 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 PLET1Q6UQ28 207 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 ZNF329Q86UD4 541 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 SLC35G3Q8N808 338 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 OR4F17Q8NGA8 305 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 OR52E5Q8NH55 327 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 MYOZ3Q8TDC0 251 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 USMG5Q96IX5 58 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 UBE2E2Q96LR5 201 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 FYTTD1Q96QD9 318 aaKnown RBP6.81□□□□□ -1.32
COL28A1-205ENST00000453441 OR4F4Q96R69 305 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 FAM103A1Q9BTL3 118 aaKnown RBP6.81□□□□□ -1.32
COL28A1-205ENST00000453441 GPN1Q9HCN4 374 aaPredicted RBP6.81□□□□□ -1.32
COL28A1-205ENST00000453441 NDUFA4L2Q9NRX3 87 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 LINC00527Q9UJ94 153 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 KLK9Q9UKQ9 250 aa6.81□□□□□ -1.32
COL28A1-205ENST00000453441 TRAV3A0A0B4J244 114 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 TEX50A0A1B0GTY4 177 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 A0A1B0GU03 582 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 FAM223BA6NKX1 122 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 TEX22C9J3V5 150 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms