RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TSPAN5P62079 268 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 KLK9Q2XQG4 91 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 DEFB114Q30KQ6 69 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 ADAMTSL5Q6ZMM2 481 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 CMTM3Q96MX0 182 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 SPATA25Q9BR10 227 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 PALMDQ9NP74 551 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 TECRQ9NZ01 308 aaKnown RBP9.75□□□□□ -0.85
CHD3-206ENST00000452447 PTTG2Q9NZH5 202 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 KLK9Q9UKQ9 250 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 IGLC7A0M8Q6 106 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 GPR31O00270 319 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 KRASP01116 189 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 TRAPPC2P0DI81 140 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 TRAPPC2BP0DI82 140 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 LYL1P12980 280 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 CBLN1P23435 193 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 S100GP29377 79 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 S100A5P33763 92 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 LPAR6P43657 344 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 SPCS2Q15005 226 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 GUCA2BQ16661 112 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 HAGHQ16775 308 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 CASC10Q5T4H9 136 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 THOC7Q6I9Y2 204 aaKnown RBP9.75□□□□□ -0.85
CHD3-206ENST00000452447 HSD17B13Q7Z5P4 300 aaPredicted RBP9.75□□□□□ -0.85
CHD3-206ENST00000452447 SNX29P2Q8IUI4 249 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 LYSMD2Q8IV50 215 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 OR1L8Q8NGR8 309 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 FCAMRQ8WWV6 532 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 CITED4Q96RK1 184 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 NEURL2Q9BR09 285 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 PLEKHA3Q9HB20 300 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 SCPEP1Q9HB40 452 aa9.75□□□□□ -0.85
CHD3-206ENST00000452447 TEX50A0A1B0GTY4 177 aa9.74□□□□□ -0.85
CHD3-206ENST00000452447 MFSD2BA6NFX1 497 aa9.74□□□□□ -0.85
CHD3-206ENST00000452447 ZNF785A8K8V0 405 aa9.74□□□□□ -0.85
CHD3-206ENST00000452447 SNAPC5O75971 98 aa9.74□□□□□ -0.85
CHD3-206ENST00000452447 IFNA6P05013 189 aa9.74□□□□□ -0.85
CHD3-206ENST00000452447 OR13C7P0DN81 318 aa9.74□□□□□ -0.85
CHD3-206ENST00000452447 LPCAT3Q6P1A2 487 aa9.74□□□□□ -0.85
CHD3-206ENST00000452447 OR10W1Q8NGF6 305 aa9.74□□□□□ -0.85
CHD3-206ENST00000452447 DYNC2LI1Q8TCX1 351 aa9.74□□□□□ -0.85
CHD3-206ENST00000452447 GPX8Q8TED1 209 aa9.74□□□□□ -0.85
CHD3-206ENST00000452447 HINT2Q9BX68 163 aa9.74□□□□□ -0.85
CHD3-206ENST00000452447 ZC4H2Q9NQZ6 224 aa9.74□□□□□ -0.85
CHD3-206ENST00000452447 CSMD3Q7Z407 3707 aa9.73□□□□□ -0.85
CHD3-206ENST00000452447 EDN2P20800 178 aa9.73□□□□□ -0.85
CHD3-206ENST00000452447 GPR183P32249 361 aa9.73□□□□□ -0.85
CHD3-206ENST00000452447 CNPY1Q3B7I2 92 aa9.73□□□□□ -0.85
CHD3-206ENST00000452447 PHLDA2Q53GA4 152 aa9.73□□□□□ -0.85
CHD3-206ENST00000452447 SLC25A24Q6NUK1 477 aa9.73□□□□□ -0.85
CHD3-206ENST00000452447 PLET1Q6UQ28 207 aa9.73□□□□□ -0.85
CHD3-206ENST00000452447 LINC00299Q6ZSB3 139 aa9.73□□□□□ -0.85
CHD3-206ENST00000452447 GDPD1Q8N9F7 314 aa9.73□□□□□ -0.85
CHD3-206ENST00000452447 CACNG8Q8WXS5 425 aa9.73□□□□□ -0.85
CHD3-206ENST00000452447 WDR89Q96FK6 387 aaPredicted RBP9.73□□□□□ -0.85
CHD3-206ENST00000452447 FXYD6Q9H0Q3 95 aa9.73□□□□□ -0.85
CHD3-206ENST00000452447 STARD9Q9P2P6 4700 aa9.73□□□□□ -0.85
CHD3-206ENST00000452447 TMEM213A2RRL7 107 aa9.72□□□□□ -0.85
CHD3-206ENST00000452447 A8MWP6 167 aa9.72□□□□□ -0.85
CHD3-206ENST00000452447 HPGDSO60760 199 aa9.72□□□□□ -0.85
CHD3-206ENST00000452447 SERPINE2P07093 398 aa9.72□□□□□ -0.85
CHD3-206ENST00000452447 CD7P09564 240 aa9.72□□□□□ -0.85
CHD3-206ENST00000452447 PTBP1P26599 531 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHD3-206ENST00000452447 G6PCP35575 357 aa9.72□□□□□ -0.85
CHD3-206ENST00000452447 ZNF57Q68EA5 555 aaPredicted RBP9.72□□□□□ -0.85
CHD3-206ENST00000452447 UXS1Q8NBZ7 420 aa9.72□□□□□ -0.85
CHD3-206ENST00000452447 MCFD2Q8NI22 146 aa9.72□□□□□ -0.85
CHD3-206ENST00000452447 ZNF502Q8TBZ5 544 aa9.72□□□□□ -0.85
CHD3-206ENST00000452447 LSM10Q969L4 123 aaKnown RBP9.72□□□□□ -0.85
CHD3-206ENST00000452447 FKBP11Q9NYL4 201 aa9.72□□□□□ -0.85
CHD3-206ENST00000452447 NSG2Q9Y328 171 aa9.72□□□□□ -0.85
CHD3-206ENST00000452447 OR51B2Q9Y5P1 312 aa9.72□□□□□ -0.85
CHD3-206ENST00000452447 SACSQ9NZJ4 4579 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 OR11H12B2RN74 326 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 FAM25AB3EWG3 89 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 FAM25CB3EWG5 89 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 FAM25GB3EWG6 89 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 RGS5O15539 181 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 ELK1P19419 428 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 RCVRNP35243 200 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 WT1-ASQ06250 92 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 ZNF585BQ52M93 769 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 SLC16A13Q7RTY0 426 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 CADM3Q8N126 398 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 DEFB125Q8N687 156 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 VN1R17PQ8TDU5 208 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 TMEM56Q96MV1 263 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 LYSTQ99698 3801 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 C6orf62Q9GZU0 229 aaPredicted RBP9.71□□□□□ -0.85
CHD3-206ENST00000452447 NDUFA4L2Q9NRX3 87 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 RABL2AQ9UBK7 228 aaPredicted RBP9.71□□□□□ -0.85
CHD3-206ENST00000452447 PRNDQ9UKY0 176 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 RABL2BQ9UNT1 228 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 SELENOKQ9Y6D0 94 aa9.71□□□□□ -0.85
CHD3-206ENST00000452447 IGHV3-35A0A0C4DH35 117 aa9.71□□□□□ -0.86
CHD3-206ENST00000452447 ANKRD55Q3KP44 614 aa9.71□□□□□ -0.86
CHD3-206ENST00000452447 TM4SF20Q53R12 229 aa9.71□□□□□ -0.86
CHD3-206ENST00000452447 UNQ9165/PRO28630Q6UXU0 137 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms