RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 GYPAP02724 150 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 DEFA4P12838 97 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 CFHR2P36980 270 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 ERVFRD-1P60508 538 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 ZNF66Q6ZN08 573 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 Q8TCH9 128 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 Q8WTZ3 238 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 CCL13Q99616 98 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 SLC35D1Q9NTN3 355 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 CALYQ9NYX4 217 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 ZNF727A8MUV8 499 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 H3BQ15 152 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 IGKV1D-33P01593 117 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 IGKV1-33P01594 117 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 PRAMEF5Q5TYX0 476 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 ZNF787Q6DD87 383 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 FAM216BQ8N7L0 139 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 PPP1R35Q8TAP8 253 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 LRFN3Q9BTN0 628 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 AURKAIP1Q9NWT8 199 aaPredicted RBP9.97□□□□□ -0.81
COL27A1-202ENST00000451716 POLR3KQ9Y2Y1 108 aaPredicted RBP9.97□□□□□ -0.81
COL27A1-202ENST00000451716 DYSFO75923 2080 aa9.97□□□□□ -0.81
COL27A1-202ENST00000451716 PRRG2O14669 202 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 RAB29O14966 203 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 TFF3Q07654 80 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 MRPL41Q8IXM3 137 aaKnown RBP9.96□□□□□ -0.81
COL27A1-202ENST00000451716 Q8NA96 180 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 IFI27L2Q9H2X8 130 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 RNF7Q9UBF6 113 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 PITPNC1Q9UKF7 332 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 TRAV3A0A0B4J244 114 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 A0A1B0GV72 72 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 CRYBA4P53673 196 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 ARF6P62330 175 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 TRAT1Q6PIZ9 186 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 Q6ZVH6 145 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 TMEM183AQ8IXX5 376 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 GBGT1Q8N5D6 347 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 ZNRD1Q9P1U0 126 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 JPT1Q9UK76 154 aa9.96□□□□□ -0.81
COL27A1-202ENST00000451716 TGIF2-C20orf24A0A0A6YYL0 155 aa9.96□□□□□ -0.82
COL27A1-202ENST00000451716 SCGB1D1O95968 90 aa9.96□□□□□ -0.82
COL27A1-202ENST00000451716 HBE1P02100 147 aa9.96□□□□□ -0.82
COL27A1-202ENST00000451716 LIPFP07098 398 aa9.96□□□□□ -0.82
COL27A1-202ENST00000451716 RAB11AP62491 216 aa9.96□□□□□ -0.82
COL27A1-202ENST00000451716 C17orf58Q2M2W7 97 aa9.96□□□□□ -0.82
COL27A1-202ENST00000451716 ZNF429Q86V71 674 aa9.96□□□□□ -0.82
COL27A1-202ENST00000451716 RPP25LQ8N5L8 163 aaKnown RBP9.96□□□□□ -0.82
COL27A1-202ENST00000451716 OR10W1Q8NGF6 305 aa9.96□□□□□ -0.82
COL27A1-202ENST00000451716 RAB39BQ96DA2 213 aa9.96□□□□□ -0.82
COL27A1-202ENST00000451716 DSCAML1Q8TD84 2053 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 PMS2P5A8MQ11 134 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 YPEL1O60688 119 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 TNCP24821 2201 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 CT45A1Q5HYN5 189 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 ACSM6Q6P461 480 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 GFRALQ6UXV0 394 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 DPPA3Q6W0C5 159 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 RAI1Q7Z5J4 1906 aaPredicted RBP9.95□□□□□ -0.82
COL27A1-202ENST00000451716 OR10P1Q8NGE3 313 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 CT45A3Q8NHU0 189 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 YPEL2Q96QA6 119 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 PSMG3Q9BT73 122 aaPredicted RBP9.95□□□□□ -0.82
COL27A1-202ENST00000451716 ATRXP46100 2492 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 LOC102723971A0A1B0GUV8 181 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 DPRXA6NFQ7 191 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 C16orf97H3BN30 126 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 MMP23AO75900 390 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 OR5G3P0C626 314 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 ELOBQ15370 118 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 FBLN7Q53RD9 439 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 SPACA3Q8IXA5 215 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 SLC25A22Q9H936 323 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 ARFGEF3Q5TH69 2177 aa9.95□□□□□ -0.82
COL27A1-202ENST00000451716 TET2Q6N021 2002 aaPredicted RBP9.95□□□□□ -0.82
COL27A1-202ENST00000451716 TRAV26-1A0A087WT03 109 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 MAP1LC3B2A6NCE7 125 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 F2RL2O00254 374 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 HSPB1P04792 205 aaKnown RBP9.94□□□□□ -0.82
COL27A1-202ENST00000451716 BSPH1Q075Z2 132 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 TMEM41BQ5BJD5 291 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 TCF23Q7RTU1 214 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 MIEN1Q9BRT3 115 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 MAP1LC3BQ9GZQ8 125 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 MEGF9Q9H1U4 602 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 OR6C3Q9NZP0 311 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 LRBAP50851 2863 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 IGHV2-70DA0A0C4DH43 119 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 K7ERU9 68 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 TOMM40O96008 361 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 DLK1P80370 383 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 SERF2P84101 59 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 TPTE2P1Q5T6R2 138 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 STUMQ69YW2 141 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 STPG4Q8N801 248 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 FAM222BQ8WU58 562 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 GAFA1Q96PS6 74 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 SCNM1Q9BWG6 230 aa9.94□□□□□ -0.82
COL27A1-202ENST00000451716 SMDT1Q9H4I9 107 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms