RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 TRAPPC2P0DI81 140 aa20.28■□□□□ 0.84
USP42-204ENST00000451154 TRAPPC2BP0DI82 140 aa20.28■□□□□ 0.84
USP42-204ENST00000451154 OR13C7P0DN81 318 aa20.28■□□□□ 0.84
USP42-204ENST00000451154 ANKRD55Q3KP44 614 aa20.28■□□□□ 0.84
USP42-204ENST00000451154 ZNF2Q9BSG1 426 aaPredicted RBP20.28■□□□□ 0.84
USP42-204ENST00000451154 RPS19P39019 145 aaKnown RBP20.27■□□□□ 0.84
USP42-204ENST00000451154 WT1-ASQ06250 92 aa20.27■□□□□ 0.84
USP42-204ENST00000451154 SLC25A24Q6NUK1 477 aa20.27■□□□□ 0.84
USP42-204ENST00000451154 RBPMS2Q6ZRY4 209 aaKnown RBP20.27■□□□□ 0.84
USP42-204ENST00000451154 MARC2Q969Z3 335 aa20.27■□□□□ 0.84
USP42-204ENST00000451154 COMMD9Q9P000 198 aa20.27■□□□□ 0.84
USP42-204ENST00000451154 MRPL27Q9P0M9 148 aaKnown RBP20.27■□□□□ 0.84
USP42-204ENST00000451154 BIRC6Q9NR09 4857 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 TMEM127O75204 238 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 RLN1P04808 185 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 SERPINE2P07093 398 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 ERVK-16P61578 105 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 GDPD1Q8N9F7 314 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 OR1L8Q8NGR8 309 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 VN1R17PQ8TDU5 208 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 MOB3AQ96BX8 217 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 GGTLC1Q9BX51 225 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 HINT2Q9BX68 163 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 ZNF436Q9C0F3 470 aaPredicted RBP20.26■□□□□ 0.83
USP42-204ENST00000451154 NSG2Q9Y328 171 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 UFC1Q9Y3C8 167 aa20.26■□□□□ 0.83
USP42-204ENST00000451154 LOC102724200A0A096LPH7 203 aaPredicted RBP20.25■□□□□ 0.83
USP42-204ENST00000451154 IGHV3-21A0A0B4J1V1 117 aa20.25■□□□□ 0.83
USP42-204ENST00000451154 TRAV25A0A0B4J276 109 aa20.25■□□□□ 0.83
USP42-204ENST00000451154 OR2T8A6NH00 312 aa20.25■□□□□ 0.83
USP42-204ENST00000451154 FGF2P09038 288 aa20.25■□□□□ 0.83
USP42-204ENST00000451154 F2RP25116 425 aa20.25■□□□□ 0.83
USP42-204ENST00000451154 LPAR6P43657 344 aa20.25■□□□□ 0.83
USP42-204ENST00000451154 KCTD21Q4G0X4 260 aa20.25■□□□□ 0.83
USP42-204ENST00000451154 UBE2NLQ5JXB2 153 aa20.25■□□□□ 0.83
USP42-204ENST00000451154 CROCCP3Q8IVE0 287 aa20.25■□□□□ 0.83
USP42-204ENST00000451154 FCAMRQ8WWV6 532 aa20.25■□□□□ 0.83
USP42-204ENST00000451154 BORCS5Q969J3 196 aa20.25■□□□□ 0.83
USP42-204ENST00000451154 OVOL2Q9BRP0 275 aa20.25■□□□□ 0.83
USP42-204ENST00000451154 MARCH11A6NNE9 402 aa20.24■□□□□ 0.83
USP42-204ENST00000451154 TGOLN2O43493 480 aa20.24■□□□□ 0.83
USP42-204ENST00000451154 JTBO76095 146 aa20.24■□□□□ 0.83
USP42-204ENST00000451154 KRASP01116 189 aa20.24■□□□□ 0.83
USP42-204ENST00000451154 MFAP2P55001 183 aa20.24■□□□□ 0.83
USP42-204ENST00000451154 ELLP55199 621 aaPredicted RBP20.24■□□□□ 0.83
USP42-204ENST00000451154 TAS2R20P59543 309 aa20.24■□□□□ 0.83
USP42-204ENST00000451154 LSM3P62310 102 aaKnown RBP20.24■□□□□ 0.83
USP42-204ENST00000451154 TMEM69Q5SWH9 247 aa20.24■□□□□ 0.83
USP42-204ENST00000451154 SAMD12Q8N8I0 201 aa20.24■□□□□ 0.83
USP42-204ENST00000451154 OR1L6Q8NGR2 347 aa20.24■□□□□ 0.83
USP42-204ENST00000451154 NDUFA4L2Q9NRX3 87 aa20.24■□□□□ 0.83
USP42-204ENST00000451154 ANAPC10Q9UM13 185 aa20.24■□□□□ 0.83
USP42-204ENST00000451154 CYB5BO43169 146 aa20.23■□□□□ 0.83
USP42-204ENST00000451154 G6PCP35575 357 aa20.23■□□□□ 0.83
USP42-204ENST00000451154 THOC7Q6I9Y2 204 aaKnown RBP20.23■□□□□ 0.83
USP42-204ENST00000451154 OR5H2Q8NGV7 314 aa20.23■□□□□ 0.83
USP42-204ENST00000451154 DGCR14Q96DF8 476 aaKnown RBP20.23■□□□□ 0.83
USP42-204ENST00000451154 OR51B2Q9Y5P1 312 aa20.23■□□□□ 0.83
USP42-204ENST00000451154 NAT1P18440 290 aa20.22■□□□□ 0.83
USP42-204ENST00000451154 HSD17B13Q7Z5P4 300 aaPredicted RBP20.22■□□□□ 0.83
USP42-204ENST00000451154 LYSMD2Q8IV50 215 aa20.22■□□□□ 0.83
USP42-204ENST00000451154 OR2C3Q8N628 320 aa20.22■□□□□ 0.83
USP42-204ENST00000451154 TMEM190Q8WZ59 177 aa20.22■□□□□ 0.83
USP42-204ENST00000451154 C5orf66Q9H5L9 145 aa20.22■□□□□ 0.83
USP42-204ENST00000451154 CHRDL1Q9BU40 450 aa20.21■□□□□ 0.83
USP42-204ENST00000451154 F11RQ9Y624 299 aaKnown RBP20.21■□□□□ 0.83
USP42-204ENST00000451154 SNAPC5O75971 98 aa20.2■□□□□ 0.82
USP42-204ENST00000451154 PRSS3P35030 304 aa20.2■□□□□ 0.82
USP42-204ENST00000451154 TAS2R46P59540 309 aa20.2■□□□□ 0.82
USP42-204ENST00000451154 CMTM1Q8IZ96 169 aa20.2■□□□□ 0.82
USP42-204ENST00000451154 SLC38A6Q8IZM9 456 aa20.2■□□□□ 0.82
USP42-204ENST00000451154 TSPAN14Q8NG11 270 aa20.2■□□□□ 0.82
USP42-204ENST00000451154 OR6F1Q8NGZ6 308 aa20.2■□□□□ 0.82
USP42-204ENST00000451154 SCARB1Q8WTV0 552 aa20.2■□□□□ 0.82
USP42-204ENST00000451154 LSM10Q969L4 123 aaKnown RBP20.2■□□□□ 0.82
USP42-204ENST00000451154 YIPF6Q96EC8 236 aa20.2■□□□□ 0.82
USP42-204ENST00000451154 BSCL2Q96G97 398 aaPredicted RBP20.2■□□□□ 0.82
USP42-204ENST00000451154 FXYD6Q9H0Q3 95 aa20.2■□□□□ 0.82
USP42-204ENST00000451154 UBQLN2Q9UHD9 624 aa20.2■□□□□ 0.82
USP42-204ENST00000451154 ALMS1Q8TCU4 4167 aa20.2■□□□□ 0.82
USP42-204ENST00000451154 IGHV3OR16-8A0A075B7F1 116 aa20.19■□□□□ 0.82
USP42-204ENST00000451154 GPR31O00270 319 aa20.19■□□□□ 0.82
USP42-204ENST00000451154 HLA-DMAP28067 261 aa20.19■□□□□ 0.82
USP42-204ENST00000451154 C20orf24Q9BUV8 137 aa20.19■□□□□ 0.82
USP42-204ENST00000451154 C21orf62Q9NYP8 219 aa20.19■□□□□ 0.82
USP42-204ENST00000451154 ZNF207O43670 478 aaKnown RBP20.18■□□□□ 0.82
USP42-204ENST00000451154 HRH1P35367 487 aa20.18■□□□□ 0.82
USP42-204ENST00000451154 PHLDA2Q53GA4 152 aa20.18■□□□□ 0.82
USP42-204ENST00000451154 UBAC2Q8NBM4 344 aa20.18■□□□□ 0.82
USP42-204ENST00000451154 SPAG8Q99932 426 aaPredicted RBP20.18■□□□□ 0.82
USP42-204ENST00000451154 DAZ1Q9NQZ3 744 aaKnown RBP20.18■□□□□ 0.82
USP42-204ENST00000451154 DBX1A6NMT0 343 aa20.17■□□□□ 0.82
USP42-204ENST00000451154 F8W735 103 aaPredicted RBP20.17■□□□□ 0.82
USP42-204ENST00000451154 TSPAN4O14817 238 aa20.17■□□□□ 0.82
USP42-204ENST00000451154 SPSB3Q6PJ21 355 aa20.17■□□□□ 0.82
USP42-204ENST00000451154 CADM3Q8N126 398 aa20.17■□□□□ 0.82
USP42-204ENST00000451154 PRNDQ9UKY0 176 aa20.17■□□□□ 0.82
USP42-204ENST00000451154 K7EIM0 57 aa20.16■□□□□ 0.82
USP42-204ENST00000451154 NDUFA4O00483 81 aa20.16■□□□□ 0.82
USP42-204ENST00000451154 EIF4EP06730 217 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms