RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 OR10W1Q8NGF6 305 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 CITED4Q96RK1 184 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 NEURL2Q9BR09 285 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 SPATA25Q9BR10 227 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 FXYD6Q9H0Q3 95 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 FKBP11Q9NYL4 201 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 OR51B2Q9Y5P1 312 aa13.12□□□□□ -0.31
CLTCL1-203ENST00000449918 STAB2Q8WWQ8 2551 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 MFSD2BA6NFX1 497 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 ZNF785A8K8V0 405 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 FAM25AB3EWG3 89 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 FAM25CB3EWG5 89 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 FAM25GB3EWG6 89 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 SERPINE2P07093 398 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 G6PCP35575 357 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 ZNF585BQ52M93 769 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 SLC38A6Q8IZM9 456 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 ZNF502Q8TBZ5 544 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 VN1R17PQ8TDU5 208 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 LSM10Q969L4 123 aaKnown RBP13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 PALMDQ9NP74 551 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 ZC4H2Q9NQZ6 224 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 NDUFA4L2Q9NRX3 87 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 FAM212BQ9NTI7 297 aaPredicted RBP13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 PRNDQ9UKY0 176 aa13.11□□□□□ -0.31
CLTCL1-203ENST00000449918 A8MWP6 167 aa13.1□□□□□ -0.31
CLTCL1-203ENST00000449918 IFNA6P05013 189 aa13.1□□□□□ -0.31
CLTCL1-203ENST00000449918 LYL1P12980 280 aa13.1□□□□□ -0.31
CLTCL1-203ENST00000449918 GPR183P32249 361 aa13.1□□□□□ -0.31
CLTCL1-203ENST00000449918 UCP3P55916 312 aa13.1□□□□□ -0.31
CLTCL1-203ENST00000449918 WT1-ASQ06250 92 aa13.1□□□□□ -0.31
CLTCL1-203ENST00000449918 ZNF57Q68EA5 555 aaPredicted RBP13.1□□□□□ -0.31
CLTCL1-203ENST00000449918 SLC25A24Q6NUK1 477 aa13.1□□□□□ -0.31
CLTCL1-203ENST00000449918 PLET1Q6UQ28 207 aa13.1□□□□□ -0.31
CLTCL1-203ENST00000449918 TSC22D3Q99576 134 aa13.1□□□□□ -0.31
CLTCL1-203ENST00000449918 HINT2Q9BX68 163 aa13.1□□□□□ -0.31
CLTCL1-203ENST00000449918 NBEAL2Q6ZNJ1 2754 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 KMT2CQ8NEZ4 4911 aaKnown RBP13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 TMEM213A2RRL7 107 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 GABARAPO95166 117 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 ZNF182P17025 639 aaPredicted RBP13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 CASC10Q5T4H9 136 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 TBC1D26Q86UD7 250 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 UXS1Q8NBZ7 420 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 OR1L6Q8NGR2 347 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 OR5B3Q8NH48 314 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 MARC2Q969Z3 335 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 TMEM56Q96MV1 263 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 PLEKHA3Q9HB20 300 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 NSG2Q9Y328 171 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 UFC1Q9Y3C8 167 aa13.09□□□□□ -0.31
CLTCL1-203ENST00000449918 CD7P09564 240 aa13.08□□□□□ -0.32
CLTCL1-203ENST00000449918 EDN2P20800 178 aa13.08□□□□□ -0.32
CLTCL1-203ENST00000449918 CTF1Q16619 201 aa13.08□□□□□ -0.32
CLTCL1-203ENST00000449918 SLC16A13Q7RTY0 426 aa13.08□□□□□ -0.32
CLTCL1-203ENST00000449918 C15orf40Q8WUR7 153 aa13.08□□□□□ -0.32
CLTCL1-203ENST00000449918 CACNG8Q8WXS5 425 aa13.08□□□□□ -0.32
CLTCL1-203ENST00000449918 ISOC1Q96CN7 298 aa13.08□□□□□ -0.32
CLTCL1-203ENST00000449918 WDR89Q96FK6 387 aaPredicted RBP13.08□□□□□ -0.32
CLTCL1-203ENST00000449918 F11RQ9Y624 299 aaKnown RBP13.08□□□□□ -0.32
CLTCL1-203ENST00000449918 CEPT1Q9Y6K0 416 aa13.08□□□□□ -0.32
CLTCL1-203ENST00000449918 OR11H12B2RN74 326 aa13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 TGOLN2O43493 480 aa13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 SMIM18P0DKX4 95 aa13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 ELLP55199 621 aaPredicted RBP13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 ANKRD55Q3KP44 614 aa13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 TM4SF20Q53R12 229 aa13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 GPR107Q5VW38 600 aa13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 UNQ9165/PRO28630Q6UXU0 137 aa13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 H2BFWTQ7Z2G1 175 aa13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 OR4A16Q8NH70 328 aa13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 BSCL2Q96G97 398 aaPredicted RBP13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 ATP6V0BQ99437 205 aa13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 NAA50Q9GZZ1 169 aaKnown RBP13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 TMEM14BQ9NUH8 114 aa13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 MRPL27Q9P0M9 148 aaKnown RBP13.07□□□□□ -0.32
CLTCL1-203ENST00000449918 HUWE1Q7Z6Z7 4374 aaKnown RBP13.06□□□□□ -0.32
CLTCL1-203ENST00000449918 M0QYG6 137 aa13.06□□□□□ -0.32
CLTCL1-203ENST00000449918 RNASE10Q5GAN6 216 aaKnown RBP13.06□□□□□ -0.32
CLTCL1-203ENST00000449918 SPSB3Q6PJ21 355 aa13.06□□□□□ -0.32
CLTCL1-203ENST00000449918 LINC00322Q6ZN03 302 aaPredicted RBP13.06□□□□□ -0.32
CLTCL1-203ENST00000449918 TMEM61Q8N0U2 210 aa13.06□□□□□ -0.32
CLTCL1-203ENST00000449918 DEFB125Q8N687 156 aa13.06□□□□□ -0.32
CLTCL1-203ENST00000449918 ZNF436Q9C0F3 470 aaPredicted RBP13.06□□□□□ -0.32
CLTCL1-203ENST00000449918 C21orf62Q9NYP8 219 aa13.06□□□□□ -0.32
CLTCL1-203ENST00000449918 EXTL2Q9UBQ6 330 aa13.06□□□□□ -0.32
CLTCL1-203ENST00000449918 KLK11Q9UBX7 282 aa13.06□□□□□ -0.32
CLTCL1-203ENST00000449918 MLXQ9UH92 298 aa13.06□□□□□ -0.32
CLTCL1-203ENST00000449918 TRAV25A0A0B4J276 109 aa13.05□□□□□ -0.32
CLTCL1-203ENST00000449918 IGHV3-35A0A0C4DH35 117 aa13.05□□□□□ -0.32
CLTCL1-203ENST00000449918 OR2T8A6NH00 312 aa13.05□□□□□ -0.32
CLTCL1-203ENST00000449918 C15orf61A6NNL5 157 aa13.05□□□□□ -0.32
CLTCL1-203ENST00000449918 C8orf88P0DMB2 117 aa13.05□□□□□ -0.32
CLTCL1-203ENST00000449918 PGAM2P15259 253 aa13.05□□□□□ -0.32
CLTCL1-203ENST00000449918 TBPP20226 339 aa13.05□□□□□ -0.32
CLTCL1-203ENST00000449918 RBPMS2Q6ZRY4 209 aaKnown RBP13.05□□□□□ -0.32
CLTCL1-203ENST00000449918 OR52B4Q8NGK2 314 aa13.05□□□□□ -0.32
CLTCL1-203ENST00000449918 SCARB1Q8WTV0 552 aa13.05□□□□□ -0.32
CLTCL1-203ENST00000449918 ZNF486Q96H40 463 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-203ENST00000449918 SEC22AQ96IW7 307 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms