RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 RIPPLY2Q5TAB7 128 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 GTF2H5Q6ZYL4 71 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 MOB3BQ86TA1 216 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 BCL2L2Q92843 193 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-204ENST00000449510 TMEM191AQ9H0A3 160 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FBXL7Q9UJT9 491 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 TRGV10A0A0A0MS01 117 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 LMO1P25800 156 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 STPG4Q8N801 248 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 TMEM116Q8NCL8 245 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 OR51B2Q9Y5P1 312 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 F11RQ9Y624 299 aaKnown RBP10.38□□□□□ -0.75
UBE3B-204ENST00000449510 LAMA1P25391 3075 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 PGPA6NDG6 321 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A10PA6NDY2 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A18PA6NE21 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A16PA6NEW6 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A20PA6NIJ5 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A8PA6NJQ4 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A7PA6NKC0 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A22PA8MWA6 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A12PA8MX19 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A5PA8MXJ8 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A23PA8MXZ1 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 TMPRSS2O15393 492 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 RBP4P02753 201 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A15PP0C7V4 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A13PP0C7W8 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A14PP0C7W9 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A24PP0C7X0 464 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 C3orf79P0CE67 100 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 COL8A2P25067 703 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 LTBRP36941 435 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 NMUP48645 174 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 ZNF138P52744 262 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 ATP1A1-AS1Q5TC04 95 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 UBE2ZQ9H832 354 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-204ENST00000449510 WDR54Q9H977 334 aa10.38□□□□□ -0.75
UBE3B-204ENST00000449510 AMMECR1Q9Y4X0 333 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-204ENST00000449510 LSM4Q9Y4Z0 139 aaKnown RBP10.38□□□□□ -0.75
UBE3B-204ENST00000449510 COL4A4P53420 1690 aaPredicted RBP10.37□□□□□ -0.75
UBE3B-204ENST00000449510 GAGE10A6NGK3 116 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 SH2D7A6NKC9 451 aaPredicted RBP10.37□□□□□ -0.75
UBE3B-204ENST00000449510 SMPD2O60906 423 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 UMODP07911 640 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 SLC25A53Q5H9E4 307 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 PEAR1Q5VY43 1037 aaPredicted RBP10.37□□□□□ -0.75
UBE3B-204ENST00000449510 FBXW9Q5XUX1 488 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 DHRS13Q6UX07 377 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 EAF1Q96JC9 268 aaPredicted RBP10.37□□□□□ -0.75
UBE3B-204ENST00000449510 TRAV5A0A0B4J249 113 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 OR4C46A6NHA9 309 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 FAM90A26D6RGX4 464 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 P01737 135 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 HLA-DQA1P01909 254 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 TNFSF4P23510 183 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 TCF24Q7RTU0 167 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 TTTY12Q9BZ98 90 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 PPIAL4DF5H284 164 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 DCAF10Q5QP82 559 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 KLF14Q8TD94 323 aaPredicted RBP10.37□□□□□ -0.75
UBE3B-204ENST00000449510 CHRDL1Q9BU40 450 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 ASCL3Q9NQ33 180 aa10.37□□□□□ -0.75
UBE3B-204ENST00000449510 YTHDF2Q9Y5A9 579 aaKnown RBP10.37□□□□□ -0.75
UBE3B-204ENST00000449510 ZNF324O75467 553 aaPredicted RBP10.36□□□□□ -0.75
UBE3B-204ENST00000449510 CT45A6P0DMU7 189 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 CT45A5P0DMU8 189 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 CT45A7P0DMV0 189 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 LYZP61626 148 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 CT45A1Q5HYN5 189 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 PDPNQ86YL7 162 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 KIR3DL3Q8N743 410 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 CT45A3Q8NHU0 189 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 METRNQ9UJH8 293 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 ZFP30Q9Y2G7 519 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 HILPDAQ9Y5L2 63 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 LINC00473A8K010 186 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 FOXI3A8MTJ6 420 aaPredicted RBP10.36□□□□□ -0.75
UBE3B-204ENST00000449510 PYYP10082 97 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 PPOXP50336 477 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 GNG5P63218 68 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 PSG7Q13046 419 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 MPV17L2Q567V2 206 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 Q5PR19 223 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 S100A7AQ86SG5 101 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 HARBI1Q96MB7 349 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 PAXXQ9BUH6 204 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 ZNF106Q9H2Y7 1883 aaKnown RBP10.36□□□□□ -0.75
UBE3B-204ENST00000449510 hDV102S1A0JD36 115 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 LNP1A1A4G5 178 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 K7ERU9 68 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 SP1P08047 785 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 CA7P43166 264 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 EFNB3Q15768 340 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 FBLN7Q53RD9 439 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 TREML4Q6UXN2 200 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 TMEM14EPQ6UXP3 125 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 RNASEH2CQ8TDP1 164 aaKnown RBP10.36□□□□□ -0.75
UBE3B-204ENST00000449510 AGMATQ9BSE5 352 aa10.36□□□□□ -0.75
UBE3B-204ENST00000449510 MAP1LC3CQ9BXW4 147 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms