RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 IGHV3-49A0A0A0MS15 119 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 SULT1C2O00338 296 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 UPK2O00526 184 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 RGS10O43665 173 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 MFAP2P55001 183 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 GNG2P59768 71 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 SPSB3Q6PJ21 355 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 GBGT1Q8N5D6 347 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 RNF2Q99496 336 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 CHRDL1Q9BU40 450 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 HINT2Q9BX68 163 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 QTRT1Q9BXR0 403 aaKnown RBP13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 C11orf68Q9H3H3 251 aaKnown RBP13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 C21orf62Q9NYP8 219 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 ANXA10Q9UJ72 324 aa13.22□□□□□ -0.29
CHCHD3-203ENST00000448878 KIAA1109Q2LD37 5005 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 SMIM30A4D0T7 59 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 TMEM235A6NFC5 223 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 K7EMT4 169 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 YIF1AO95070 293 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 CA1P00915 261 aaPredicted RBP13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 TRAPPC2P0DI81 140 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 TRAPPC2BP0DI82 140 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 NQO2P16083 231 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 ARPC4P59998 168 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 GDPD1Q8N9F7 314 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 CMTM3Q96MX0 182 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 SMPXQ9UHP9 88 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 APLNQ9ULZ1 77 aa13.21□□□□□ -0.29
CHCHD3-203ENST00000448878 TRAV1-2A0A0B4J238 106 aa13.2□□□□□ -0.3
CHCHD3-203ENST00000448878 MRPS14O60783 128 aaKnown RBP13.2□□□□□ -0.3
CHCHD3-203ENST00000448878 HPRT1P00492 218 aa13.2□□□□□ -0.3
CHCHD3-203ENST00000448878 SERPINE2P07093 398 aa13.2□□□□□ -0.3
CHCHD3-203ENST00000448878 FCGR2CP31995 323 aa13.2□□□□□ -0.3
CHCHD3-203ENST00000448878 TAS2R31P59538 309 aa13.2□□□□□ -0.3
CHCHD3-203ENST00000448878 CATR1Q13166 79 aa13.2□□□□□ -0.3
CHCHD3-203ENST00000448878 TMEM187Q14656 261 aa13.2□□□□□ -0.3
CHCHD3-203ENST00000448878 OGFRL1Q5TC84 451 aaPredicted RBP13.2□□□□□ -0.3
CHCHD3-203ENST00000448878 SRSF8Q9BRL6 282 aaKnown RBP13.2□□□□□ -0.3
CHCHD3-203ENST00000448878 RHPN1-AS1Q9BWJ2 59 aa13.2□□□□□ -0.3
CHCHD3-203ENST00000448878 TMEM140Q9NV12 185 aa13.2□□□□□ -0.3
CHCHD3-203ENST00000448878 C15orf62A8K5M9 175 aa13.19□□□□□ -0.3
CHCHD3-203ENST00000448878 CASQ2O14958 399 aaPredicted RBP13.19□□□□□ -0.3
CHCHD3-203ENST00000448878 PTHLHP12272 177 aa13.19□□□□□ -0.3
CHCHD3-203ENST00000448878 ADMP35318 185 aa13.19□□□□□ -0.3
CHCHD3-203ENST00000448878 FXYD4P59646 89 aa13.19□□□□□ -0.3
CHCHD3-203ENST00000448878 LINC00336Q6ZUF6 198 aa13.19□□□□□ -0.3
CHCHD3-203ENST00000448878 CENPSQ8N2Z9 138 aa13.19□□□□□ -0.3
CHCHD3-203ENST00000448878 TMEM116Q8NCL8 245 aa13.19□□□□□ -0.3
CHCHD3-203ENST00000448878 OR13F1Q8NGS4 319 aa13.19□□□□□ -0.3
CHCHD3-203ENST00000448878 OR51H1Q8NH63 302 aa13.19□□□□□ -0.3
CHCHD3-203ENST00000448878 SCARB1Q8WTV0 552 aa13.19□□□□□ -0.3
CHCHD3-203ENST00000448878 SLC5A7Q9GZV3 580 aa13.19□□□□□ -0.3
CHCHD3-203ENST00000448878 IGHV3OR16-13A0A075B7E8 117 aa13.18□□□□□ -0.3
CHCHD3-203ENST00000448878 IGHV3-74A0A0B4J1X5 117 aa13.18□□□□□ -0.3
CHCHD3-203ENST00000448878 TEX50A0A1B0GTY4 177 aa13.18□□□□□ -0.3
CHCHD3-203ENST00000448878 C11orf94C9JXX5 98 aa13.18□□□□□ -0.3
CHCHD3-203ENST00000448878 EBAG9O00559 213 aa13.18□□□□□ -0.3
CHCHD3-203ENST00000448878 CHEK1O14757 476 aa13.18□□□□□ -0.3
CHCHD3-203ENST00000448878 PAFAH1B2P68402 229 aa13.18□□□□□ -0.3
CHCHD3-203ENST00000448878 ETV7Q9Y603 341 aa13.18□□□□□ -0.3
CHCHD3-203ENST00000448878 IGHV7-4-1A0A0J9YVY3 117 aa13.17□□□□□ -0.3
CHCHD3-203ENST00000448878 RBFOX2O43251 390 aaKnown RBP eCLIP13.17□□□□□ -0.33e-6■■■■□ 22.3
CHCHD3-203ENST00000448878 ERVK-16P61578 105 aa13.17□□□□□ -0.3
CHCHD3-203ENST00000448878 WT1-ASQ06250 92 aa13.17□□□□□ -0.3
CHCHD3-203ENST00000448878 THOC7Q6I9Y2 204 aaKnown RBP13.17□□□□□ -0.3
CHCHD3-203ENST00000448878 GVQW1Q8N7I0 195 aa13.17□□□□□ -0.3
CHCHD3-203ENST00000448878 ZBTB34Q8NCN2 500 aa13.17□□□□□ -0.3
CHCHD3-203ENST00000448878 OR1L8Q8NGR8 309 aa13.17□□□□□ -0.3
CHCHD3-203ENST00000448878 DUSP21Q9H596 190 aa13.17□□□□□ -0.3
CHCHD3-203ENST00000448878 HECTD4Q9Y4D8 3996 aa13.17□□□□□ -0.3
CHCHD3-203ENST00000448878 DNASE2O00115 360 aaPredicted RBP13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 NUPL2O15504 423 aaKnown RBP13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 SSX5O60225 188 aa13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 EIF4EP06730 217 aaKnown RBP13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 FCER2P06734 321 aa13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 RELQ04864 619 aaPredicted RBP13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 AADACL3Q5VUY0 350 aa13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 LEMD1Q68G75 181 aa13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 C22orf42Q6IC83 251 aa13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 HSD17B13Q7Z5P4 300 aaPredicted RBP13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 NR2C2APQ86WQ0 139 aa13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 BEST4Q8NFU0 473 aa13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 F11RQ9Y624 299 aaKnown RBP13.16□□□□□ -0.3
CHCHD3-203ENST00000448878 TRAV14DV4A0A0A6YYC5 116 aa13.15□□□□□ -0.3
CHCHD3-203ENST00000448878 PPYP01298 95 aa13.15□□□□□ -0.3
CHCHD3-203ENST00000448878 MED14OSP0DP75 135 aa13.15□□□□□ -0.3
CHCHD3-203ENST00000448878 RPL11P62913 178 aaKnown RBP13.15□□□□□ -0.3
CHCHD3-203ENST00000448878 POU2AF1Q16633 256 aa13.15□□□□□ -0.3
CHCHD3-203ENST00000448878 ZNF773Q6PK81 442 aa13.15□□□□□ -0.3
CHCHD3-203ENST00000448878 TCF24Q7RTU0 167 aa13.15□□□□□ -0.3
CHCHD3-203ENST00000448878 PRSS48Q7RTY5 328 aa13.15□□□□□ -0.3
CHCHD3-203ENST00000448878 GIMAP1Q8WWP7 306 aa13.15□□□□□ -0.3
CHCHD3-203ENST00000448878 LSM10Q969L4 123 aaKnown RBP13.15□□□□□ -0.3
CHCHD3-203ENST00000448878 PLEKHA2Q9HB19 425 aa13.15□□□□□ -0.3
CHCHD3-203ENST00000448878 NSG2Q9Y328 171 aa13.15□□□□□ -0.3
CHCHD3-203ENST00000448878 F8W735 103 aaPredicted RBP13.14□□□□□ -0.31
CHCHD3-203ENST00000448878 SCGNO76038 276 aa13.14□□□□□ -0.31
CHCHD3-203ENST00000448878 CTSGP08311 255 aa13.14□□□□□ -0.31
CHCHD3-203ENST00000448878 DEFB131AP59861 70 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms