RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 MARC2Q969Z3 335 aa21.11■□□□□ 0.97
CBX4-202ENST00000448310 OVOL2Q9BRP0 275 aa21.11■□□□□ 0.97
CBX4-202ENST00000448310 COMMD9Q9P000 198 aa21.11■□□□□ 0.97
CBX4-202ENST00000448310 MRPL27Q9P0M9 148 aaKnown RBP21.11■□□□□ 0.97
CBX4-202ENST00000448310 UFC1Q9Y3C8 167 aa21.11■□□□□ 0.97
CBX4-202ENST00000448310 TEX50A0A1B0GTY4 177 aa21.1■□□□□ 0.97
CBX4-202ENST00000448310 TGOLN2O43493 480 aa21.1■□□□□ 0.97
CBX4-202ENST00000448310 RLN1P04808 185 aa21.1■□□□□ 0.97
CBX4-202ENST00000448310 RFX2P48378 723 aa21.1■□□□□ 0.97
CBX4-202ENST00000448310 WT1-ASQ06250 92 aa21.1■□□□□ 0.97
CBX4-202ENST00000448310 GDPD1Q8N9F7 314 aa21.1■□□□□ 0.97
CBX4-202ENST00000448310 OR1L6Q8NGR2 347 aa21.1■□□□□ 0.97
CBX4-202ENST00000448310 ZNF436Q9C0F3 470 aaPredicted RBP21.1■□□□□ 0.97
CBX4-202ENST00000448310 IGHV3-21A0A0B4J1V1 117 aa21.09■□□□□ 0.97
CBX4-202ENST00000448310 TRAV25A0A0B4J276 109 aa21.09■□□□□ 0.97
CBX4-202ENST00000448310 OR2T8A6NH00 312 aa21.09■□□□□ 0.97
CBX4-202ENST00000448310 XRCC3O43542 346 aa21.09■□□□□ 0.97
CBX4-202ENST00000448310 TRAPPC2P0DI81 140 aa21.09■□□□□ 0.97
CBX4-202ENST00000448310 TRAPPC2BP0DI82 140 aa21.09■□□□□ 0.97
CBX4-202ENST00000448310 SLC25A24Q6NUK1 477 aa21.09■□□□□ 0.97
CBX4-202ENST00000448310 ZNF2Q9BSG1 426 aaPredicted RBP21.09■□□□□ 0.97
CBX4-202ENST00000448310 HINT2Q9BX68 163 aa21.09■□□□□ 0.97
CBX4-202ENST00000448310 MARCH11A6NNE9 402 aa21.08■□□□□ 0.97
CBX4-202ENST00000448310 PMP2P02689 132 aa21.08■□□□□ 0.97
CBX4-202ENST00000448310 SERPINE2P07093 398 aa21.08■□□□□ 0.97
CBX4-202ENST00000448310 MFAP2P55001 183 aa21.08■□□□□ 0.97
CBX4-202ENST00000448310 ELLP55199 621 aaPredicted RBP21.08■□□□□ 0.97
CBX4-202ENST00000448310 ERVK-16P61578 105 aa21.08■□□□□ 0.97
CBX4-202ENST00000448310 VN1R17PQ8TDU5 208 aa21.08■□□□□ 0.97
CBX4-202ENST00000448310 TMEM190Q8WZ59 177 aa21.08■□□□□ 0.97
CBX4-202ENST00000448310 UBQLN2Q9UHD9 624 aa21.08■□□□□ 0.97
CBX4-202ENST00000448310 NSG2Q9Y328 171 aa21.08■□□□□ 0.97
CBX4-202ENST00000448310 PGLYRP1O75594 196 aaPredicted RBP21.07■□□□□ 0.96
CBX4-202ENST00000448310 FGF2P09038 288 aa21.07■□□□□ 0.96
CBX4-202ENST00000448310 OR1L8Q8NGR8 309 aa21.07■□□□□ 0.96
CBX4-202ENST00000448310 MOB3AQ96BX8 217 aa21.07■□□□□ 0.96
CBX4-202ENST00000448310 S100A16Q96FQ6 103 aaKnown RBP21.07■□□□□ 0.96
CBX4-202ENST00000448310 F2RP25116 425 aa21.06■□□□□ 0.96
CBX4-202ENST00000448310 LPAR6P43657 344 aa21.06■□□□□ 0.96
CBX4-202ENST00000448310 THOC7Q6I9Y2 204 aaKnown RBP21.06■□□□□ 0.96
CBX4-202ENST00000448310 DHRS11Q6UWP2 260 aa21.06■□□□□ 0.96
CBX4-202ENST00000448310 OR2C3Q8N628 320 aa21.06■□□□□ 0.96
CBX4-202ENST00000448310 FCAMRQ8WWV6 532 aa21.06■□□□□ 0.96
CBX4-202ENST00000448310 BORCS5Q969J3 196 aa21.06■□□□□ 0.96
CBX4-202ENST00000448310 C5orf66Q9H5L9 145 aa21.06■□□□□ 0.96
CBX4-202ENST00000448310 NDUFA4L2Q9NRX3 87 aa21.06■□□□□ 0.96
CBX4-202ENST00000448310 IGHV3OR16-8A0A075B7F1 116 aa21.05■□□□□ 0.96
CBX4-202ENST00000448310 CYB5BO43169 146 aa21.05■□□□□ 0.96
CBX4-202ENST00000448310 KRASP01116 189 aa21.05■□□□□ 0.96
CBX4-202ENST00000448310 TAS2R20P59543 309 aa21.05■□□□□ 0.96
CBX4-202ENST00000448310 UBE2NLQ5JXB2 153 aa21.05■□□□□ 0.96
CBX4-202ENST00000448310 CHRDL1Q9BU40 450 aa21.05■□□□□ 0.96
CBX4-202ENST00000448310 FXYD6Q9H0Q3 95 aa21.05■□□□□ 0.96
CBX4-202ENST00000448310 ANAPC10Q9UM13 185 aa21.05■□□□□ 0.96
CBX4-202ENST00000448310 G6PCP35575 357 aa21.04■□□□□ 0.96
CBX4-202ENST00000448310 TMEM69Q5SWH9 247 aa21.04■□□□□ 0.96
CBX4-202ENST00000448310 HSD17B13Q7Z5P4 300 aaPredicted RBP21.04■□□□□ 0.96
CBX4-202ENST00000448310 SAMD12Q8N8I0 201 aa21.04■□□□□ 0.96
CBX4-202ENST00000448310 OR5H2Q8NGV7 314 aa21.04■□□□□ 0.96
CBX4-202ENST00000448310 LSM10Q969L4 123 aaKnown RBP21.04■□□□□ 0.96
CBX4-202ENST00000448310 DGCR14Q96DF8 476 aaKnown RBP21.04■□□□□ 0.96
CBX4-202ENST00000448310 OR51B2Q9Y5P1 312 aa21.04■□□□□ 0.96
CBX4-202ENST00000448310 F11RQ9Y624 299 aaKnown RBP21.04■□□□□ 0.96
CBX4-202ENST00000448310 TMEM127O75204 238 aa21.03■□□□□ 0.96
CBX4-202ENST00000448310 RPS19P39019 145 aaKnown RBP21.03■□□□□ 0.96
CBX4-202ENST00000448310 SLC38A6Q8IZM9 456 aa21.03■□□□□ 0.96
CBX4-202ENST00000448310 SCARB1Q8WTV0 552 aa21.03■□□□□ 0.96
CBX4-202ENST00000448310 BSCL2Q96G97 398 aaPredicted RBP21.03■□□□□ 0.96
CBX4-202ENST00000448310 SPAG8Q99932 426 aaPredicted RBP21.03■□□□□ 0.96
CBX4-202ENST00000448310 C20orf24Q9BUV8 137 aa21.03■□□□□ 0.96
CBX4-202ENST00000448310 DAZ1Q9NQZ3 744 aaKnown RBP21.03■□□□□ 0.96
CBX4-202ENST00000448310 C21orf62Q9NYP8 219 aa21.03■□□□□ 0.96
CBX4-202ENST00000448310 F8W735 103 aaPredicted RBP21.02■□□□□ 0.96
CBX4-202ENST00000448310 ZNF207O43670 478 aaKnown RBP21.02■□□□□ 0.96
CBX4-202ENST00000448310 LSM3P62310 102 aaKnown RBP21.02■□□□□ 0.96
CBX4-202ENST00000448310 KCTD21Q4G0X4 260 aa21.02■□□□□ 0.96
CBX4-202ENST00000448310 UBAC2Q8NBM4 344 aa21.02■□□□□ 0.96
CBX4-202ENST00000448310 TSPAN4O14817 238 aa21.01■□□□□ 0.95
CBX4-202ENST00000448310 SNAPC5O75971 98 aa21.01■□□□□ 0.95
CBX4-202ENST00000448310 NAT1P18440 290 aa21.01■□□□□ 0.95
CBX4-202ENST00000448310 TAS2R46P59540 309 aa21.01■□□□□ 0.95
CBX4-202ENST00000448310 PMS2P11Q13670 270 aa21.01■□□□□ 0.95
CBX4-202ENST00000448310 CROCCP3Q8IVE0 287 aa21.01■□□□□ 0.95
CBX4-202ENST00000448310 TSPAN14Q8NG11 270 aa21.01■□□□□ 0.95
CBX4-202ENST00000448310 A0A0J9YWU9 116 aa21■□□□□ 0.95
CBX4-202ENST00000448310 DBX1A6NMT0 343 aa21■□□□□ 0.95
CBX4-202ENST00000448310 K7EIM0 57 aa21■□□□□ 0.95
CBX4-202ENST00000448310 GPR31O00270 319 aa21■□□□□ 0.95
CBX4-202ENST00000448310 NDUFA4O00483 81 aa21■□□□□ 0.95
CBX4-202ENST00000448310 ADMP35318 185 aa21■□□□□ 0.95
CBX4-202ENST00000448310 EWSR1Q01844 656 aaKnown RBP eCLIP21■□□□□ 0.952e-6■■■■■ 28.6
CBX4-202ENST00000448310 DEFB135Q30KP9 77 aa21■□□□□ 0.95
CBX4-202ENST00000448310 ODF3L2Q3SX64 289 aa21■□□□□ 0.95
CBX4-202ENST00000448310 SPSB3Q6PJ21 355 aa21■□□□□ 0.95
CBX4-202ENST00000448310 CMTM1Q8IZ96 169 aa21■□□□□ 0.95
CBX4-202ENST00000448310 HLA-DMAP28067 261 aa20.99■□□□□ 0.95
CBX4-202ENST00000448310 PHLDA2Q53GA4 152 aa20.99■□□□□ 0.95
CBX4-202ENST00000448310 Q56UQ5 140 aa20.99■□□□□ 0.95
CBX4-202ENST00000448310 OR6F1Q8NGZ6 308 aa20.99■□□□□ 0.95
CBX4-202ENST00000448310 CXorf65A6NEN9 183 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms