RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 MECP2P51608 486 aaKnown RBP8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 BRWD1-AS2P59051 145 aa8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 OR2B8PP59922 312 aa8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 CD81P60033 236 aa8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 SLC25A24Q6NUK1 477 aa8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 PLET1Q6UQ28 207 aa8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 IL34Q6ZMJ4 242 aa8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 SLC16A13Q7RTY0 426 aa8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 GPHB5Q86YW7 130 aa8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 OR1L6Q8NGR2 347 aa8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 C15orf40Q8WUR7 153 aa8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 TMEM56Q96MV1 263 aa8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 PRNDQ9UKY0 176 aa8.34□□□□□ -1.07
NPIPB3-202ENST00000448012 C2orf70A6NJV1 201 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 HLA-AP01891 365 aaKnown RBP8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 CLEC3BP05452 202 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 EIF4EP06730 217 aaKnown RBP8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 OR13C7P0DN81 318 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 ANKRD55Q3KP44 614 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 CD300EQ496F6 205 aaPredicted RBP8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 PHLDA2Q53GA4 152 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 Q8N1Y9 231 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 MUC7Q8TAX7 377 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 DNAH3Q8TD57 4116 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 GPX8Q8TED1 209 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 LSM10Q969L4 123 aaKnown RBP8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 MARC2Q969Z3 335 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 FANCD2OSQ96PS1 177 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 NEURL2Q9BR09 285 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 ANAPC10Q9UM13 185 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 UFC1Q9Y3C8 167 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 OR51B2Q9Y5P1 312 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 S4R3C0 116 aa8.33□□□□□ -1.08
NPIPB3-202ENST00000448012 IGLV11-55A0A075B6I3 123 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 E7EUB6 86 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 HPGDSO60760 199 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 ATG12O94817 140 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 SERPINE2P07093 398 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 LYL1P12980 280 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 MYOD1P15172 320 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 PGAM2P15259 253 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 CBLN1P23435 193 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 PTBP1P26599 531 aaKnown RBP eCLIP8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 GPR183P32249 361 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 ETV6P41212 452 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 DEFB114Q30KQ6 69 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 RNASE10Q5GAN6 216 aaKnown RBP8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 ZNF57Q68EA5 555 aaPredicted RBP8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 RBPMS2Q6ZRY4 209 aaKnown RBP8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 SLC38A6Q8IZM9 456 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 GDPD1Q8N9F7 314 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 OR5B3Q8NH48 314 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 OR4A16Q8NH70 328 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 VN1R17PQ8TDU5 208 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 FCAMRQ8WWV6 532 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 C19orf73Q9NVV2 129 aa8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 GAR1Q9NY12 217 aaKnown RBP8.32□□□□□ -1.08
NPIPB3-202ENST00000448012 TRAV3A0A0B4J244 114 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 TEX50A0A1B0GTY4 177 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 IGLC7A0M8Q6 106 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 ELK1P19419 428 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 G6PCP35575 357 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 SPANXN2Q5MJ10 180 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 C19orf35Q6ZS72 473 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 H2BFWTQ7Z2G1 175 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 LYSMD2Q8IV50 215 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 CADM3Q8N126 398 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 UXS1Q8NBZ7 420 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 CCDC140Q96MF4 163 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 TM2D3Q9BRN9 247 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 FXYD6Q9H0Q3 95 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 PLEKHA3Q9HB20 300 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 FAM212BQ9NTI7 297 aaPredicted RBP8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 SORL1Q92673 2214 aa8.31□□□□□ -1.08
NPIPB3-202ENST00000448012 A0A1B0GW64 132 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 IZUMO1RA6ND01 250 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 MFSD2BA6NFX1 497 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 OR11H12B2RN74 326 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 RGS5O15539 181 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 TBPP20226 339 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 PPP5CP53041 499 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 ELLP55199 621 aaPredicted RBP8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 UCP3P55916 312 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 HAGHQ16775 308 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 Q56UQ5 140 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 RNASE12Q5GAN4 147 aaKnown RBP8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 SPSB3Q6PJ21 355 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 TBC1D26Q86UD7 250 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 CCDC190Q86UF4 302 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 UBAC2Q8NBM4 344 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 OR10W1Q8NGF6 305 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 OR52B4Q8NGK2 314 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 ZNF502Q8TBZ5 544 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 BSCL2Q96G97 398 aaPredicted RBP8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 CITED4Q96RK1 184 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 PDCD10Q9BUL8 212 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 ZC4H2Q9NQZ6 224 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 EXTL2Q9UBQ6 330 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 NSG2Q9Y328 171 aa8.3□□□□□ -1.08
NPIPB3-202ENST00000448012 CGB1A6NKQ9 187 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms