RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 IGLV2-14P01704 120 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 AZU1P20160 251 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 USF1P22415 310 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-205ENST00000447654 GNG4P50150 75 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 PLSCR4Q9NRQ2 329 aa15.97■□□□□ 0.15
HMGA1-205ENST00000447654 IGHV1-45A0A0A0MS14 117 aa15.96■□□□□ 0.15
HMGA1-205ENST00000447654 TMEM189A5PLL7 270 aa15.96■□□□□ 0.15
HMGA1-205ENST00000447654 A6NDN8 102 aa15.96■□□□□ 0.15
HMGA1-205ENST00000447654 FAM27BQ5VT28 67 aa15.96■□□□□ 0.15
HMGA1-205ENST00000447654 SPACA3Q8IXA5 215 aa15.96■□□□□ 0.15
HMGA1-205ENST00000447654 OR1F12Q8NHA8 337 aa15.96■□□□□ 0.15
HMGA1-205ENST00000447654 YTHDF2Q9Y5A9 579 aaKnown RBP15.96■□□□□ 0.15
HMGA1-205ENST00000447654 ARHGAP21Q5T5U3 1957 aa15.96■□□□□ 0.15
HMGA1-205ENST00000447654 LOC102723996A0A087X1L8 192 aa15.96■□□□□ 0.14
HMGA1-205ENST00000447654 hCG_38984A0A1B0GV85 526 aa15.96■□□□□ 0.14
HMGA1-205ENST00000447654 SYS1-DBNDD2H3BUS1 97 aa15.96■□□□□ 0.14
HMGA1-205ENST00000447654 SP9P0CG40 484 aa15.96■□□□□ 0.14
HMGA1-205ENST00000447654 COX6A1P12074 109 aa15.96■□□□□ 0.14
HMGA1-205ENST00000447654 KRTAP27-1Q3LI81 207 aa15.96■□□□□ 0.14
HMGA1-205ENST00000447654 MTURNQ8N3F0 131 aa15.96■□□□□ 0.14
HMGA1-205ENST00000447654 WDR54Q9H977 334 aa15.96■□□□□ 0.14
HMGA1-205ENST00000447654 JKAMPQ9P055 326 aa15.96■□□□□ 0.14
HMGA1-205ENST00000447654 DHHO43323 396 aa15.95■□□□□ 0.14
HMGA1-205ENST00000447654 GCHFRP30047 84 aa15.95■□□□□ 0.14
HMGA1-205ENST00000447654 PLP1P60201 277 aa15.95■□□□□ 0.14
HMGA1-205ENST00000447654 TCTEX1D4Q5JR98 221 aa15.95■□□□□ 0.14
HMGA1-205ENST00000447654 WDR82Q6UXN9 313 aa15.95■□□□□ 0.14
HMGA1-205ENST00000447654 S100A7AQ86SG5 101 aa15.95■□□□□ 0.14
HMGA1-205ENST00000447654 IMMP1LQ96LU5 166 aa15.95■□□□□ 0.14
HMGA1-205ENST00000447654 NPFFR1Q9GZQ6 430 aa15.95■□□□□ 0.14
HMGA1-205ENST00000447654 ZNF835Q9Y2P0 537 aa15.95■□□□□ 0.14
HMGA1-205ENST00000447654 AHCTF1Q8WYP5 2266 aa15.95■□□□□ 0.14
HMGA1-205ENST00000447654 PSMB11A5LHX3 300 aa15.94■□□□□ 0.14
HMGA1-205ENST00000447654 SYNGR3O43761 229 aa15.94■□□□□ 0.14
HMGA1-205ENST00000447654 WISP2O76076 250 aa15.94■□□□□ 0.14
HMGA1-205ENST00000447654 TIGITQ495A1 244 aa15.94■□□□□ 0.14
HMGA1-205ENST00000447654 OR2K2Q8NGT1 345 aa15.94■□□□□ 0.14
HMGA1-205ENST00000447654 ST6GALNAC6Q969X2 333 aa15.94■□□□□ 0.14
HMGA1-205ENST00000447654 DEFA4P12838 97 aa15.94■□□□□ 0.14
HMGA1-205ENST00000447654 CHCHD1Q96BP2 118 aaKnown RBP15.94■□□□□ 0.14
HMGA1-205ENST00000447654 TECRQ9NZ01 308 aaKnown RBP15.94■□□□□ 0.14
HMGA1-205ENST00000447654 RAB29O14966 203 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 OR5AL1P0C617 328 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 MC5RP33032 325 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 SLAQ13239 276 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 RAB31Q13636 194 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 TMEM97Q5BJF2 176 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 SPATA12Q7Z6I5 190 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 TMEM105Q8N8V8 129 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 FADS6Q8N9I5 356 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 ZBTB34Q8NCN2 500 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 PROK2Q9HC23 129 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 CLEC5AQ9NY25 188 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 COL27A1Q8IZC6 1860 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-205ENST00000447654 A0A0G2JMM0 328 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 A0A1W2PPB8 328 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 HELTA6NFD8 242 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 KIR3DP1A8MWS1 328 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 CER1O95813 267 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 HBZP02008 142 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 CENPWQ5EE01 88 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 SLC23A3Q6PIS1 610 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 MOB1BQ7L9L4 216 aa15.93■□□□□ 0.14
HMGA1-205ENST00000447654 CCL3P10147 92 aa15.92■□□□□ 0.14
HMGA1-205ENST00000447654 HTR1DP28221 377 aa15.92■□□□□ 0.14
HMGA1-205ENST00000447654 HSD52Q0P140 79 aa15.92■□□□□ 0.14
HMGA1-205ENST00000447654 GCSAMLQ5JQS6 135 aa15.92■□□□□ 0.14
HMGA1-205ENST00000447654 SLC35E4Q6ICL7 350 aa15.92■□□□□ 0.14
HMGA1-205ENST00000447654 RNASEKQ6P5S7 137 aaKnown RBP15.92■□□□□ 0.14
HMGA1-205ENST00000447654 OR2V2Q96R30 315 aa15.92■□□□□ 0.14
HMGA1-205ENST00000447654 FNDC4Q9H6D8 234 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-205ENST00000447654 COX8AP10176 69 aa15.92■□□□□ 0.14
HMGA1-205ENST00000447654 BCL3P20749 454 aa15.92■□□□□ 0.14
HMGA1-205ENST00000447654 EDDM3BP56851 147 aa15.92■□□□□ 0.14
HMGA1-205ENST00000447654 FAM120AOSQ5T036 256 aa15.92■□□□□ 0.14
HMGA1-205ENST00000447654 PIGCQ92535 297 aa15.92■□□□□ 0.14
HMGA1-205ENST00000447654 PPP1R3CQ9UQK1 317 aa15.92■□□□□ 0.14
HMGA1-205ENST00000447654 BPIFA4PQ86YQ2 179 aa15.91■□□□□ 0.14
HMGA1-205ENST00000447654 OR2T6Q8NHC8 308 aa15.91■□□□□ 0.14
HMGA1-205ENST00000447654 VSTM2AQ8TAG5 236 aa15.91■□□□□ 0.14
HMGA1-205ENST00000447654 DPF1Q92782 380 aa15.91■□□□□ 0.14
HMGA1-205ENST00000447654 CRIM1Q9NZV1 1036 aa15.91■□□□□ 0.14
HMGA1-205ENST00000447654 C22orf46C9J442 243 aa15.9■□□□□ 0.14
HMGA1-205ENST00000447654 RRHO14718 337 aa15.9■□□□□ 0.14
HMGA1-205ENST00000447654 SPINK4O60575 86 aa15.9■□□□□ 0.14
HMGA1-205ENST00000447654 OTX2P32243 289 aa15.9■□□□□ 0.14
HMGA1-205ENST00000447654 OR10AG1Q8NH19 301 aa15.9■□□□□ 0.14
HMGA1-205ENST00000447654 hDV102S1A0JD36 115 aa15.9■□□□□ 0.14
HMGA1-205ENST00000447654 ZG16O60844 167 aa15.9■□□□□ 0.14
HMGA1-205ENST00000447654 GABRA6Q16445 453 aa15.9■□□□□ 0.14
HMGA1-205ENST00000447654 CD300EQ496F6 205 aaPredicted RBP15.9■□□□□ 0.14
HMGA1-205ENST00000447654 PDLIM3Q53GG5 364 aaPredicted RBP15.9■□□□□ 0.14
HMGA1-205ENST00000447654 IBA57Q5T440 356 aaKnown RBP15.9■□□□□ 0.14
HMGA1-205ENST00000447654 PCSK5Q92824 1860 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 A0A087X0K7 114 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 J3QR89 54 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 M0R296 226 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 ZNF16P17020 682 aaPredicted RBP15.89■□□□□ 0.13
HMGA1-205ENST00000447654 RAB9AP51151 201 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 TMPRSS3P57727 454 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms