RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 SRSF8Q9BRL6 282 aaKnown RBP16.88■□□□□ 0.29
HDLBP-220ENST00000442730 QTRT1Q9BXR0 403 aaKnown RBP16.88■□□□□ 0.29
HDLBP-220ENST00000442730 IGLV11-55A0A075B6I3 123 aa16.87■□□□□ 0.29
HDLBP-220ENST00000442730 NDUFB8O95169 186 aa16.87■□□□□ 0.29
HDLBP-220ENST00000442730 KRASP01116 189 aa16.87■□□□□ 0.29
HDLBP-220ENST00000442730 PGAM2P15259 253 aa16.87■□□□□ 0.29
HDLBP-220ENST00000442730 S100GP29377 79 aa16.87■□□□□ 0.29
HDLBP-220ENST00000442730 SCGB2B2Q4G0G5 96 aa16.87■□□□□ 0.29
HDLBP-220ENST00000442730 FAM209BQ5JX69 171 aa16.87■□□□□ 0.29
HDLBP-220ENST00000442730 TBC1D26Q86UD7 250 aa16.87■□□□□ 0.29
HDLBP-220ENST00000442730 CADM3Q8N126 398 aa16.87■□□□□ 0.29
HDLBP-220ENST00000442730 OR4C16Q8NGL9 310 aa16.87■□□□□ 0.29
HDLBP-220ENST00000442730 CCDC140Q96MF4 163 aa16.87■□□□□ 0.29
HDLBP-220ENST00000442730 DMRT1Q9Y5R6 373 aa16.87■□□□□ 0.29
HDLBP-220ENST00000442730 ANKRD20A5PA0PJZ0 165 aa16.86■□□□□ 0.29
HDLBP-220ENST00000442730 PPP5D1E7EU14 171 aa16.86■□□□□ 0.29
HDLBP-220ENST00000442730 CSN3P07498 182 aa16.86■□□□□ 0.29
HDLBP-220ENST00000442730 HIST1H1BP16401 226 aaKnown RBP16.86■□□□□ 0.29
HDLBP-220ENST00000442730 PTBP1P26599 531 aaKnown RBP eCLIP16.86■□□□□ 0.29
HDLBP-220ENST00000442730 G6PCP35575 357 aa16.86■□□□□ 0.29
HDLBP-220ENST00000442730 Q8N402 240 aa16.86■□□□□ 0.29
HDLBP-220ENST00000442730 TRIM63Q969Q1 353 aa16.86■□□□□ 0.29
HDLBP-220ENST00000442730 FAM212BQ9NTI7 297 aaPredicted RBP16.86■□□□□ 0.29
HDLBP-220ENST00000442730 SMAD5-AS1Q9Y6J3 95 aa16.86■□□□□ 0.29
HDLBP-220ENST00000442730 DISC1C4P0D8 188 aa16.85■□□□□ 0.29
HDLBP-220ENST00000442730 IGHV3-23P01764 117 aa16.85■□□□□ 0.29
HDLBP-220ENST00000442730 DEFA4P12838 97 aa16.85■□□□□ 0.29
HDLBP-220ENST00000442730 ETV6P41212 452 aa16.85■□□□□ 0.29
HDLBP-220ENST00000442730 TATDN3Q17R31 274 aa16.85■□□□□ 0.29
HDLBP-220ENST00000442730 THOC7Q6I9Y2 204 aaKnown RBP16.85■□□□□ 0.29
HDLBP-220ENST00000442730 OR10W1Q8NGF6 305 aa16.85■□□□□ 0.29
HDLBP-220ENST00000442730 THAP7Q9BT49 309 aaPredicted RBP16.85■□□□□ 0.29
HDLBP-220ENST00000442730 SIGLEC8Q9NYZ4 499 aa16.85■□□□□ 0.29
HDLBP-220ENST00000442730 S4R3C0 116 aa16.85■□□□□ 0.29
HDLBP-220ENST00000442730 STAB2Q8WWQ8 2551 aa16.84■□□□□ 0.29
HDLBP-220ENST00000442730 TEX50A0A1B0GTY4 177 aa16.84■□□□□ 0.29
HDLBP-220ENST00000442730 WT1-ASQ06250 92 aa16.84■□□□□ 0.29
HDLBP-220ENST00000442730 NSG2Q9Y328 171 aa16.84■□□□□ 0.29
HDLBP-220ENST00000442730 MFSD2BA6NFX1 497 aa16.83■□□□□ 0.28
HDLBP-220ENST00000442730 HLA-AP01891 365 aaKnown RBP16.83■□□□□ 0.28
HDLBP-220ENST00000442730 TRAPPC2P0DI81 140 aa16.83■□□□□ 0.28
HDLBP-220ENST00000442730 TRAPPC2BP0DI82 140 aa16.83■□□□□ 0.28
HDLBP-220ENST00000442730 GDPD1Q8N9F7 314 aa16.83■□□□□ 0.28
HDLBP-220ENST00000442730 OR1L8Q8NGR8 309 aa16.83■□□□□ 0.28
HDLBP-220ENST00000442730 TERB2Q8NHR7 220 aa16.83■□□□□ 0.28
HDLBP-220ENST00000442730 EEF1AKMT3Q96AZ1 226 aa16.83■□□□□ 0.28
HDLBP-220ENST00000442730 SRRQ9GZT4 340 aa16.83■□□□□ 0.28
HDLBP-220ENST00000442730 NDUFA4L2Q9NRX3 87 aa16.83■□□□□ 0.28
HDLBP-220ENST00000442730 TENM3Q9P273 2699 aa16.83■□□□□ 0.28
HDLBP-220ENST00000442730 PEMTQ9UBM1 199 aa16.83■□□□□ 0.28
HDLBP-220ENST00000442730 A6NHS1 94 aa16.82■□□□□ 0.28
HDLBP-220ENST00000442730 GGCTO75223 188 aaKnown RBP16.82■□□□□ 0.28
HDLBP-220ENST00000442730 IGKV1-39P01597 117 aa16.82■□□□□ 0.28
HDLBP-220ENST00000442730 IGKV1D-39P04432 117 aa16.82■□□□□ 0.28
HDLBP-220ENST00000442730 NHLRC4P0CG21 123 aaPredicted RBP16.82■□□□□ 0.28
HDLBP-220ENST00000442730 PI3P19957 117 aa16.82■□□□□ 0.28
HDLBP-220ENST00000442730 AP3S2P59780 193 aa16.82■□□□□ 0.28
HDLBP-220ENST00000442730 RND3P61587 244 aa16.82■□□□□ 0.28
HDLBP-220ENST00000442730 CLEC19AQ6UXS0 136 aa16.82■□□□□ 0.28
HDLBP-220ENST00000442730 HSD17B13Q7Z5P4 300 aaPredicted RBP16.82■□□□□ 0.28
HDLBP-220ENST00000442730 OR13C8Q8NGS7 320 aa16.82■□□□□ 0.28
HDLBP-220ENST00000442730 ZNF486Q96H40 463 aaPredicted RBP16.82■□□□□ 0.28
HDLBP-220ENST00000442730 SEC22AQ96IW7 307 aa16.82■□□□□ 0.28
HDLBP-220ENST00000442730 PRRT1Q99946 306 aa16.82■□□□□ 0.28
HDLBP-220ENST00000442730 PRNDQ9UKY0 176 aa16.82■□□□□ 0.28
HDLBP-220ENST00000442730 OR51B2Q9Y5P1 312 aa16.82■□□□□ 0.28
HDLBP-220ENST00000442730 DBX1A6NMT0 343 aa16.81■□□□□ 0.28
HDLBP-220ENST00000442730 C15orf61A6NNL5 157 aa16.81■□□□□ 0.28
HDLBP-220ENST00000442730 SNAPC5O75971 98 aa16.81■□□□□ 0.28
HDLBP-220ENST00000442730 OR13C7P0DN81 318 aa16.81■□□□□ 0.28
HDLBP-220ENST00000442730 ARL3P36405 182 aa16.81■□□□□ 0.28
HDLBP-220ENST00000442730 KLF9Q13886 244 aaPredicted RBP16.81■□□□□ 0.28
HDLBP-220ENST00000442730 ADAMTSL5Q6ZMM2 481 aa16.81■□□□□ 0.28
HDLBP-220ENST00000442730 OR51S1Q8NGJ8 323 aa16.81■□□□□ 0.28
HDLBP-220ENST00000442730 LSM10Q969L4 123 aaKnown RBP16.81■□□□□ 0.28
HDLBP-220ENST00000442730 MRGPRFQ96AM1 343 aa16.81■□□□□ 0.28
HDLBP-220ENST00000442730 CXorf58Q96LI9 332 aa16.81■□□□□ 0.28
HDLBP-220ENST00000442730 TMEM14BQ9NUH8 114 aa16.81■□□□□ 0.28
HDLBP-220ENST00000442730 MCUBQ9NWR8 336 aa16.81■□□□□ 0.28
HDLBP-220ENST00000442730 H0Y980 276 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 OR2C1O95371 312 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 SERPINE2P07093 398 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 FAUP35544 74 aaKnown RBP16.8■□□□□ 0.28
HDLBP-220ENST00000442730 PIGPP57054 158 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 CNPY1Q3B7I2 92 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 TOMM5Q8N4H5 51 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 OR5B3Q8NH48 314 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 ZFAND1Q8TCF1 268 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 MARCH1Q8TCQ1 289 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 TSC22D3Q99576 134 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 ASCL2Q99929 193 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 HINT2Q9BX68 163 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 SLC2A8Q9NY64 477 aa16.8■□□□□ 0.28
HDLBP-220ENST00000442730 TRBV7-1A0A0A6YYK4 115 aa16.79■□□□□ 0.28
HDLBP-220ENST00000442730 MECP2P51608 486 aaKnown RBP16.79■□□□□ 0.28
HDLBP-220ENST00000442730 LCN12Q6JVE5 192 aa16.79■□□□□ 0.28
HDLBP-220ENST00000442730 Q8N1Y9 231 aa16.79■□□□□ 0.28
HDLBP-220ENST00000442730 CCDC71LQ8N9Z2 235 aa16.79■□□□□ 0.28
HDLBP-220ENST00000442730 ZNF502Q8TBZ5 544 aa16.79■□□□□ 0.28
HDLBP-220ENST00000442730 LGALS9O00182 355 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms