RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 GLT8D1Q68CQ7 371 aa1.24□□□□□ -2.21
PFDN4-202ENST00000441080 DHFR2Q86XF0 187 aa1.24□□□□□ -2.21
PFDN4-202ENST00000441080 GID4Q8IVV7 300 aa1.24□□□□□ -2.21
PFDN4-202ENST00000441080 DEFB125Q8N687 156 aa1.24□□□□□ -2.21
PFDN4-202ENST00000441080 C15orf53Q8NAA6 179 aa1.24□□□□□ -2.21
PFDN4-202ENST00000441080 CPAMD8Q8IZJ3 1885 aa1.23□□□□□ -2.21
PFDN4-202ENST00000441080 C21orf140B9A014 251 aa1.23□□□□□ -2.21
PFDN4-202ENST00000441080 FGF6P10767 208 aa1.23□□□□□ -2.21
PFDN4-202ENST00000441080 NFYAP23511 347 aaPredicted RBP1.23□□□□□ -2.21
PFDN4-202ENST00000441080 FXYD2P54710 66 aa1.23□□□□□ -2.21
PFDN4-202ENST00000441080 NAA20P61599 178 aa1.23□□□□□ -2.21
PFDN4-202ENST00000441080 Q8N2B8 174 aa1.23□□□□□ -2.21
PFDN4-202ENST00000441080 NKIRAS1Q9NYS0 192 aa1.23□□□□□ -2.21
PFDN4-202ENST00000441080 BAIAP2Q9UQB8 552 aa1.23□□□□□ -2.21
PFDN4-202ENST00000441080 LHFPL6Q9Y693 200 aa1.23□□□□□ -2.21
PFDN4-202ENST00000441080 PTPRSQ13332 1948 aa1.23□□□□□ -2.21
PFDN4-202ENST00000441080 KIF24Q5T7B8 1368 aa1.22□□□□□ -2.21
PFDN4-202ENST00000441080 PMP2P02689 132 aa1.22□□□□□ -2.21
PFDN4-202ENST00000441080 C1QAP02745 245 aa1.22□□□□□ -2.21
PFDN4-202ENST00000441080 METTL15P1P0C7V9 234 aa1.22□□□□□ -2.21
PFDN4-202ENST00000441080 COQ5Q5HYK3 327 aa1.22□□□□□ -2.21
PFDN4-202ENST00000441080 CNBD2Q96M20 576 aa1.22□□□□□ -2.21
PFDN4-202ENST00000441080 IL36BQ9NZH7 164 aa1.22□□□□□ -2.21
PFDN4-202ENST00000441080 TONSLQ96HA7 1378 aa1.21□□□□□ -2.21
PFDN4-202ENST00000441080 EVC2Q86UK5 1308 aa1.21□□□□□ -2.22
PFDN4-202ENST00000441080 IRGMA1A4Y4 181 aa1.21□□□□□ -2.22
PFDN4-202ENST00000441080 EIF2B2P49770 351 aaKnown RBP1.21□□□□□ -2.22
PFDN4-202ENST00000441080 PLCXD2Q0VAA5 305 aa1.21□□□□□ -2.22
PFDN4-202ENST00000441080 EFCAB1Q9HAE3 211 aa1.21□□□□□ -2.22
PFDN4-202ENST00000441080 MYH11P35749 1972 aa1.21□□□□□ -2.22
PFDN4-202ENST00000441080 DIDO1Q9BTC0 2240 aaKnown RBP1.2□□□□□ -2.22
PFDN4-202ENST00000441080 SMARCA4P51532 1647 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 TRBV20OR9-2A0A075B6H5 130 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 A0A1B0GV50 99 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 FABP5P3A8MUU1 101 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 INMT-MINDY4F8WBC2 141 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 ACOX3O15254 700 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 PRM2P04554 102 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 TCL1AP56279 114 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 SUPT4H1P63272 117 aaKnown RBP1.2□□□□□ -2.22
PFDN4-202ENST00000441080 ZNF345Q14585 488 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 GUK1Q16774 197 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 YIPF3Q9GZM5 350 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 OR51I1Q9H343 314 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 SETD5Q9C0A6 1442 aa1.2□□□□□ -2.22
PFDN4-202ENST00000441080 ISG15P05161 165 aa1.19□□□□□ -2.22
PFDN4-202ENST00000441080 RPS4Y1P22090 263 aaKnown RBP1.19□□□□□ -2.22
PFDN4-202ENST00000441080 DCCP43146 1447 aa1.19□□□□□ -2.22
PFDN4-202ENST00000441080 AP2S1P53680 142 aaPredicted RBP1.19□□□□□ -2.22
PFDN4-202ENST00000441080 GRK1Q15835 563 aa1.19□□□□□ -2.22
PFDN4-202ENST00000441080 IBA57Q5T440 356 aaKnown RBP1.19□□□□□ -2.22
PFDN4-202ENST00000441080 SFXN4Q6P4A7 337 aa1.19□□□□□ -2.22
PFDN4-202ENST00000441080 CD200R1LQ6Q8B3 271 aa1.19□□□□□ -2.22
PFDN4-202ENST00000441080 ZNF439Q8NDP4 499 aa1.19□□□□□ -2.22
PFDN4-202ENST00000441080 GPR32P1Q8NGA4 272 aa1.19□□□□□ -2.22
PFDN4-202ENST00000441080 REG4Q9BYZ8 158 aa1.19□□□□□ -2.22
PFDN4-202ENST00000441080 CISHQ9NSE2 258 aa1.19□□□□□ -2.22
PFDN4-202ENST00000441080 PCDH15Q96QU1 1955 aa1.19□□□□□ -2.22
PFDN4-202ENST00000441080 BRWD1Q9NSI6 2320 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 INTS1Q8N201 2190 aaKnown RBP1.18□□□□□ -2.22
PFDN4-202ENST00000441080 C9orf84Q5VXU9 1444 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 IGKV2D-26A0A0A0MRZ7 120 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 A0A0J9YY10 115 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 A0A1B0GX78 115 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 TMEM212A6NML5 194 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 KRT7P08729 469 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 RAB5BP61020 215 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 CCL20P78556 96 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 RUNX1Q01196 453 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 COTL1Q14019 142 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 SYPL2Q5VXT5 272 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 C10orf67Q8IYJ2 551 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 C11orf40Q8WZ69 217 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 SERPINI1Q99574 410 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 XPNPEP1Q9NQW7 623 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 LSM5Q9Y4Y9 91 aaKnown RBP1.18□□□□□ -2.22
PFDN4-202ENST00000441080 GREB1Q4ZG55 1949 aa1.18□□□□□ -2.22
PFDN4-202ENST00000441080 DCTN3O75935 186 aa1.17□□□□□ -2.22
PFDN4-202ENST00000441080 ZNF80P51504 273 aaPredicted RBP1.17□□□□□ -2.22
PFDN4-202ENST00000441080 PMAIP1Q13794 54 aa1.17□□□□□ -2.22
PFDN4-202ENST00000441080 C10orf55Q5SWW7 151 aa1.17□□□□□ -2.22
PFDN4-202ENST00000441080 AAED1Q7RTV5 226 aa1.17□□□□□ -2.22
PFDN4-202ENST00000441080 WFDC11Q8NEX6 87 aa1.17□□□□□ -2.22
PFDN4-202ENST00000441080 OR51D1Q8NGF3 324 aa1.17□□□□□ -2.22
PFDN4-202ENST00000441080 TMEM106AQ96A25 262 aa1.17□□□□□ -2.22
PFDN4-202ENST00000441080 SNURFQ9Y675 71 aa1.17□□□□□ -2.22
PFDN4-202ENST00000441080 MYOFQ9NZM1 2061 aa1.16□□□□□ -2.22
PFDN4-202ENST00000441080 TRAV14DV4A0A0A6YYC5 116 aa1.16□□□□□ -2.22
PFDN4-202ENST00000441080 HCRTO43612 131 aa1.16□□□□□ -2.22
PFDN4-202ENST00000441080 IFITM2Q01629 132 aa1.16□□□□□ -2.22
PFDN4-202ENST00000441080 KISS1Q15726 138 aa1.16□□□□□ -2.22
PFDN4-202ENST00000441080 AADACL3Q5VUY0 350 aa1.16□□□□□ -2.22
PFDN4-202ENST00000441080 OR2T4Q8NH00 348 aa1.16□□□□□ -2.22
PFDN4-202ENST00000441080 PTH2Q96A98 100 aa1.16□□□□□ -2.22
PFDN4-202ENST00000441080 OPTNQ96CV9 577 aa1.16□□□□□ -2.22
PFDN4-202ENST00000441080 ODF3Q96PU9 254 aa1.16□□□□□ -2.22
PFDN4-202ENST00000441080 WDR61Q9GZS3 305 aaKnown RBP1.16□□□□□ -2.22
PFDN4-202ENST00000441080 TTC21AQ8NDW8 1320 aa1.15□□□□□ -2.22
PFDN4-202ENST00000441080 TGOLN2O43493 480 aa1.15□□□□□ -2.23
PFDN4-202ENST00000441080 CTAG1AP78358 180 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms