RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 NAA50Q9GZZ1 169 aaKnown RBP15.08■□□□□ 0
SHROOM1-204ENST00000440118 KMT2CQ8NEZ4 4911 aaKnown RBP15.08■□□□□ 0
SHROOM1-204ENST00000440118 MFSD2BA6NFX1 497 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 C2orf70A6NJV1 201 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 CGB1A6NKQ9 187 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 FGF2P09038 288 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 OR13C7P0DN81 318 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 ZNF182P17025 639 aaPredicted RBP15.07■□□□□ 0
SHROOM1-204ENST00000440118 CD81P60033 236 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 GUCA2BQ16661 112 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 CD300EQ496F6 205 aaPredicted RBP15.07■□□□□ 0
SHROOM1-204ENST00000440118 LINC00299Q6ZSB3 139 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 SLC38A6Q8IZM9 456 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 Q8N1Y9 231 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 OR10W1Q8NGF6 305 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 ZC4H2Q9NQZ6 224 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 SLC2A8Q9NY64 477 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 EXTL2Q9UBQ6 330 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 OR51B2Q9Y5P1 312 aa15.07■□□□□ 0
SHROOM1-204ENST00000440118 IZUMO1RA6ND01 250 aa15.06■□□□□ 0
SHROOM1-204ENST00000440118 FOLR2P14207 255 aa15.06■□□□□ 0
SHROOM1-204ENST00000440118 GPR183P32249 361 aa15.06■□□□□ 0
SHROOM1-204ENST00000440118 CTF1Q16619 201 aa15.06■□□□□ 0
SHROOM1-204ENST00000440118 TBC1D26Q86UD7 250 aa15.06■□□□□ 0
SHROOM1-204ENST00000440118 GDPD1Q8N9F7 314 aa15.06■□□□□ 0
SHROOM1-204ENST00000440118 LSM10Q969L4 123 aaKnown RBP15.06■□□□□ 0
SHROOM1-204ENST00000440118 PRNDQ9UKY0 176 aa15.06■□□□□ 0
SHROOM1-204ENST00000440118 NSG2Q9Y328 171 aa15.06■□□□□ 0
SHROOM1-204ENST00000440118 M0QYG6 137 aa15.05■□□□□ -0
SHROOM1-204ENST00000440118 LGALS9O00182 355 aa15.05■□□□□ -0
SHROOM1-204ENST00000440118 TPPPO94811 219 aa15.05■□□□□ -0
SHROOM1-204ENST00000440118 CLEC3BP05452 202 aa15.05■□□□□ -0
SHROOM1-204ENST00000440118 PGAM2P15259 253 aa15.05■□□□□ -0
SHROOM1-204ENST00000440118 RNASE10Q5GAN6 216 aaKnown RBP15.05■□□□□ -0
SHROOM1-204ENST00000440118 SLC25A24Q6NUK1 477 aa15.05■□□□□ -0
SHROOM1-204ENST00000440118 GPHB5Q86YW7 130 aa15.05■□□□□ -0
SHROOM1-204ENST00000440118 LAX1Q8IWV1 398 aa15.05■□□□□ -0
SHROOM1-204ENST00000440118 FKBP11Q9NYL4 201 aa15.05■□□□□ -0
SHROOM1-204ENST00000440118 TECRQ9NZ01 308 aaKnown RBP15.05■□□□□ -0
SHROOM1-204ENST00000440118 TEX50A0A1B0GTY4 177 aa15.04■□□□□ -0
SHROOM1-204ENST00000440118 RGS5O15539 181 aa15.04■□□□□ -0
SHROOM1-204ENST00000440118 PLET1Q6UQ28 207 aa15.04■□□□□ -0
SHROOM1-204ENST00000440118 C15orf40Q8WUR7 153 aa15.04■□□□□ -0
SHROOM1-204ENST00000440118 CACNG8Q8WXS5 425 aa15.04■□□□□ -0
SHROOM1-204ENST00000440118 TMEM56Q96MV1 263 aa15.04■□□□□ -0
SHROOM1-204ENST00000440118 PLEKHA3Q9HB20 300 aa15.04■□□□□ -0
SHROOM1-204ENST00000440118 PALMDQ9NP74 551 aa15.04■□□□□ -0
SHROOM1-204ENST00000440118 C19orf73Q9NVV2 129 aa15.04■□□□□ -0
SHROOM1-204ENST00000440118 A8MZ25 164 aa15.03■□□□□ -0
SHROOM1-204ENST00000440118 SERPINE2P07093 398 aa15.03■□□□□ -0
SHROOM1-204ENST00000440118 ZNF585BQ52M93 769 aa15.03■□□□□ -0
SHROOM1-204ENST00000440118 H2BFWTQ7Z2G1 175 aa15.03■□□□□ -0
SHROOM1-204ENST00000440118 OR5B3Q8NH48 314 aa15.03■□□□□ -0
SHROOM1-204ENST00000440118 OR4A16Q8NH70 328 aa15.03■□□□□ -0
SHROOM1-204ENST00000440118 NEURL2Q9BR09 285 aa15.03■□□□□ -0
SHROOM1-204ENST00000440118 DMRT1Q9Y5R6 373 aa15.03■□□□□ -0
SHROOM1-204ENST00000440118 C3orf84H3BNL1 204 aa15.02■□□□□ -0
SHROOM1-204ENST00000440118 EDN2P20800 178 aa15.02■□□□□ -0
SHROOM1-204ENST00000440118 WT1-ASQ06250 92 aa15.02■□□□□ -0
SHROOM1-204ENST00000440118 KLK9Q2XQG4 91 aa15.02■□□□□ -0
SHROOM1-204ENST00000440118 DEFB114Q30KQ6 69 aa15.02■□□□□ -0
SHROOM1-204ENST00000440118 OR52I2Q8NH67 350 aa15.02■□□□□ -0
SHROOM1-204ENST00000440118 ZNF502Q8TBZ5 544 aa15.02■□□□□ -0
SHROOM1-204ENST00000440118 SPATA25Q9BR10 227 aa15.02■□□□□ -0
SHROOM1-204ENST00000440118 TM2D3Q9BRN9 247 aa15.02■□□□□ -0
SHROOM1-204ENST00000440118 THAP7Q9BT49 309 aaPredicted RBP15.02■□□□□ -0
SHROOM1-204ENST00000440118 NDUFA4L2Q9NRX3 87 aa15.02■□□□□ -0
SHROOM1-204ENST00000440118 FAM212BQ9NTI7 297 aaPredicted RBP15.02■□□□□ -0
SHROOM1-204ENST00000440118 KLK9Q9UKQ9 250 aa15.02■□□□□ -0
SHROOM1-204ENST00000440118 SELENOKQ9Y6D0 94 aa15.02■□□□□ -0
SHROOM1-204ENST00000440118 IGHV3-35A0A0C4DH35 117 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 C15orf61A6NNL5 157 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 A8MWP6 167 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 H3BMQ9 156 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 CBLN1P23435 193 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 PTBP1P26599 531 aaKnown RBP eCLIP15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 PPP5CP53041 499 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 UCP3P55916 312 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 ZNF57Q68EA5 555 aaPredicted RBP15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 ADAMTSL5Q6ZMM2 481 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 SLC16A13Q7RTY0 426 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 UBAC2Q8NBM4 344 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 MUC7Q8TAX7 377 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 VN1R17PQ8TDU5 208 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 WDR89Q96FK6 387 aaPredicted RBP15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 KLK11Q9UBX7 282 aa15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 F11RQ9Y624 299 aaKnown RBP15.01□□□□□ -0.01
SHROOM1-204ENST00000440118 IGHV3-21A0A0B4J1V1 117 aa15□□□□□ -0.01
SHROOM1-204ENST00000440118 TMEM213A2RRL7 107 aa15□□□□□ -0.01
SHROOM1-204ENST00000440118 OR2T8A6NH00 312 aa15□□□□□ -0.01
SHROOM1-204ENST00000440118 TGOLN2O43493 480 aa15□□□□□ -0.01
SHROOM1-204ENST00000440118 TBPP20226 339 aa15□□□□□ -0.01
SHROOM1-204ENST00000440118 ARRDC1Q8N5I2 433 aa15□□□□□ -0.01
SHROOM1-204ENST00000440118 UXS1Q8NBZ7 420 aa15□□□□□ -0.01
SHROOM1-204ENST00000440118 OR1L6Q8NGR2 347 aa15□□□□□ -0.01
SHROOM1-204ENST00000440118 MRGPRFQ96AM1 343 aa15□□□□□ -0.01
SHROOM1-204ENST00000440118 UFC1Q9Y3C8 167 aa15□□□□□ -0.01
SHROOM1-204ENST00000440118 HUWE1Q7Z6Z7 4374 aaKnown RBP14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 CD3DP04234 171 aa14.99□□□□□ -0.01
SHROOM1-204ENST00000440118 PI3P19957 117 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms