RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 ELOBQ15370 118 aa12.14□□□□□ -0.47
IFT140-204ENST00000439987 HIST2H2BEQ16778 126 aa12.14□□□□□ -0.47
IFT140-204ENST00000439987 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
IFT140-204ENST00000439987 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.14□□□□□ -0.47
IFT140-204ENST00000439987 HIST3H2BBQ8N257 126 aa12.14□□□□□ -0.47
IFT140-204ENST00000439987 ZNF843Q8N446 348 aa12.14□□□□□ -0.47
IFT140-204ENST00000439987 HIST1H2BHQ93079 126 aa12.14□□□□□ -0.47
IFT140-204ENST00000439987 OR4C12Q96R67 309 aa12.14□□□□□ -0.47
IFT140-204ENST00000439987 HIST1H2BNQ99877 126 aa12.14□□□□□ -0.47
IFT140-204ENST00000439987 HIST1H2BMQ99879 126 aa12.14□□□□□ -0.47
IFT140-204ENST00000439987 C15orf61A6NNL5 157 aa12.13□□□□□ -0.47
IFT140-204ENST00000439987 SSBP3Q9BWW4 388 aaPredicted RBP12.13□□□□□ -0.47
IFT140-204ENST00000439987 RBFOX3A6NFN3 312 aa12.13□□□□□ -0.47
IFT140-204ENST00000439987 H3BQ15 152 aa12.13□□□□□ -0.47
IFT140-204ENST00000439987 PAX1P15863 534 aa12.13□□□□□ -0.47
IFT140-204ENST00000439987 IL3RAP26951 378 aa12.13□□□□□ -0.47
IFT140-204ENST00000439987 DLX1P56177 255 aa12.13□□□□□ -0.47
IFT140-204ENST00000439987 ZNF525Q8N782 197 aa12.13□□□□□ -0.47
IFT140-204ENST00000439987 OR5R1Q8NH85 324 aa12.13□□□□□ -0.47
IFT140-204ENST00000439987 GNPNAT1Q96EK6 184 aaPredicted RBP12.13□□□□□ -0.47
IFT140-204ENST00000439987 NABP2Q9BQ15 211 aa12.13□□□□□ -0.47
IFT140-204ENST00000439987 SRRM4A7MD48 611 aaKnown RBP12.12□□□□□ -0.47
IFT140-204ENST00000439987 OVOL3O00110 214 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 IFNA5P01569 189 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 IGLV1-47P01700 117 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 FHITP49789 147 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 PRRX1P54821 245 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 CDPF1Q6NVV7 123 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 TGIF2LXQ8IUE1 241 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 OSR1Q8TAX0 266 aaPredicted RBP12.12□□□□□ -0.47
IFT140-204ENST00000439987 CLEC7AQ9BXN2 247 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 TMEM14BQ9NUH8 114 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 ONECUT1Q9UBC0 465 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 FOXA2Q9Y261 457 aaPredicted RBP12.12□□□□□ -0.47
IFT140-204ENST00000439987 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
IFT140-204ENST00000439987 SLC38A11Q08AI6 406 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 GAMTQ14353 236 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 OR8G2PQ6IF36 304 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 OR2G3Q8NGZ4 309 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 Q8WTZ3 238 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 RFNGQ9Y644 331 aa12.12□□□□□ -0.47
IFT140-204ENST00000439987 TET2Q6N021 2002 aaPredicted RBP12.11□□□□□ -0.47
IFT140-204ENST00000439987 RUNX1Q01196 453 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 HLA-DRB5Q30154 266 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 KHDC3LQ587J8 217 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 SLC25A24Q6NUK1 477 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 SPNS3Q6ZMD2 512 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 TMEM182Q6ZP80 229 aaPredicted RBP12.11□□□□□ -0.47
IFT140-204ENST00000439987 FAM213BQ8TBF2 198 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 PCGF1Q9BSM1 259 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 TCF19Q9Y242 345 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 LOC105371242A0A075B767 164 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 PMS2P5A8MQ11 134 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 B4DEV8 164 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 TMEM177Q53S58 311 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 PDPNQ86YL7 162 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 BEND2Q8NDZ0 799 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 LHX4Q969G2 390 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 TVP23CQ96ET8 276 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 GPR61Q9BZJ8 451 aa12.11□□□□□ -0.47
IFT140-204ENST00000439987 C1QL1O75973 258 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 VDAC2P45880 294 aaPredicted RBP12.1□□□□□ -0.47
IFT140-204ENST00000439987 PRB3Q04118 309 aaPredicted RBP12.1□□□□□ -0.47
IFT140-204ENST00000439987 TLE4Q04727 773 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 SLC35E3Q7Z769 313 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 OR4C13Q8NGP0 309 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 RAB24Q969Q5 203 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 FLYWCH2Q96CP2 140 aaKnown RBP12.1□□□□□ -0.47
IFT140-204ENST00000439987 BET1LQ9NYM9 111 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 KIAA1456Q9P272 454 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 UBR5O95071 2799 aaPredicted RBP12.1□□□□□ -0.47
IFT140-204ENST00000439987 ARHGAP32A7KAX9 2087 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 UPK2O00526 184 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 CXCL1P09341 107 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 SAA1P0DJI8 122 aaPredicted RBP12.1□□□□□ -0.47
IFT140-204ENST00000439987 HSPE1P61604 102 aaKnown RBP12.1□□□□□ -0.47
IFT140-204ENST00000439987 Q8N7P7 452 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 OR10P1Q8NGE3 313 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 NOL4LQ96MY1 436 aaPredicted RBP12.1□□□□□ -0.47
IFT140-204ENST00000439987 RARRES2Q99969 163 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 NIPSNAP3BQ9BS92 247 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 HIPK2Q9H2X6 1198 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 HEYLQ9NQ87 328 aaPredicted RBP12.1□□□□□ -0.47
IFT140-204ENST00000439987 PRNDQ9UKY0 176 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 WASHC3Q9Y3C0 194 aa12.1□□□□□ -0.47
IFT140-204ENST00000439987 TNCP24821 2201 aa12.09□□□□□ -0.47
IFT140-204ENST00000439987 C15orf62A8K5M9 175 aa12.09□□□□□ -0.47
IFT140-204ENST00000439987 BUB1B-PAK6H3BSN5 160 aa12.09□□□□□ -0.47
IFT140-204ENST00000439987 HSPB1P04792 205 aaKnown RBP12.09□□□□□ -0.47
IFT140-204ENST00000439987 COX7A1P24310 79 aa12.09□□□□□ -0.47
IFT140-204ENST00000439987 DLK1P80370 383 aa12.09□□□□□ -0.47
IFT140-204ENST00000439987 AKR1C8PQ5T2L2 129 aa12.09□□□□□ -0.47
IFT140-204ENST00000439987 THNSL2Q86YJ6 484 aa12.09□□□□□ -0.47
IFT140-204ENST00000439987 SCGB1C1Q8TD33 95 aa12.09□□□□□ -0.47
IFT140-204ENST00000439987 PINX1Q96BK5 328 aaKnown RBP12.09□□□□□ -0.47
IFT140-204ENST00000439987 SPOCK3Q9BQ16 436 aa12.09□□□□□ -0.47
IFT140-204ENST00000439987 ASH1LQ9NR48 2969 aaKnown RBP12.09□□□□□ -0.47
IFT140-204ENST00000439987 SMCO3A2RU48 225 aa12.09□□□□□ -0.47
IFT140-204ENST00000439987 ZNF727A8MUV8 499 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms