RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 FAM103A1Q9BTL3 118 aaKnown RBP12.17□□□□□ -0.46
CPSF7-205ENST00000439958 WDR61Q9GZS3 305 aaKnown RBP12.17□□□□□ -0.46
CPSF7-205ENST00000439958 RPRMQ9NS64 109 aa12.17□□□□□ -0.46
CPSF7-205ENST00000439958 LDLRAD2Q5SZI1 272 aa12.16□□□□□ -0.46
CPSF7-205ENST00000439958 FAM122CQ6P4D5 195 aa12.16□□□□□ -0.46
CPSF7-205ENST00000439958 OR1L8Q8NGR8 309 aa12.16□□□□□ -0.46
CPSF7-205ENST00000439958 VSTM2AQ8TAG5 236 aa12.16□□□□□ -0.46
CPSF7-205ENST00000439958 SAT2Q96F10 170 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-205ENST00000439958 IGHV4-30-2A0A087WSY4 118 aa12.16□□□□□ -0.46
CPSF7-205ENST00000439958 RAB2AP61019 212 aa12.16□□□□□ -0.46
CPSF7-205ENST00000439958 ERHP84090 104 aaKnown RBP12.16□□□□□ -0.46
CPSF7-205ENST00000439958 TMEM14BQ9NUH8 114 aa12.16□□□□□ -0.46
CPSF7-205ENST00000439958 GNG13Q9P2W3 67 aa12.16□□□□□ -0.46
CPSF7-205ENST00000439958 ACANP16112 2415 aa12.16□□□□□ -0.46
CPSF7-205ENST00000439958 CEACAM3P40198 252 aa12.16□□□□□ -0.46
CPSF7-205ENST00000439958 OPRK1P41145 380 aa12.15□□□□□ -0.46
CPSF7-205ENST00000439958 CCL20P78556 96 aa12.15□□□□□ -0.46
CPSF7-205ENST00000439958 FAM216AQ8WUB2 273 aa12.15□□□□□ -0.46
CPSF7-205ENST00000439958 MISP3Q96FF7 219 aa12.15□□□□□ -0.46
CPSF7-205ENST00000439958 FOXA2Q9Y261 457 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-205ENST00000439958 USF1P22415 310 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-205ENST00000439958 PRTN3P24158 256 aa12.15□□□□□ -0.46
CPSF7-205ENST00000439958 SRSF1Q07955 248 aaKnown RBP eCLIP12.15□□□□□ -0.46
CPSF7-205ENST00000439958 LRRC75BQ2VPJ9 315 aa12.15□□□□□ -0.46
CPSF7-205ENST00000439958 GCSAMLQ5JQS6 135 aa12.15□□□□□ -0.46
CPSF7-205ENST00000439958 BRD3OSQ6XYD6 125 aa12.15□□□□□ -0.46
CPSF7-205ENST00000439958 HSD17B13Q7Z5P4 300 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-205ENST00000439958 LINC00311Q8N616 119 aa12.15□□□□□ -0.46
CPSF7-205ENST00000439958 PARP11Q9NR21 331 aa12.15□□□□□ -0.46
CPSF7-205ENST00000439958 PRRC2AP48634 2157 aaKnown RBP12.15□□□□□ -0.46
CPSF7-205ENST00000439958 FBN2P35556 2912 aa12.15□□□□□ -0.46
CPSF7-205ENST00000439958 C22orf15Q8WYQ4 148 aa12.15□□□□□ -0.47
CPSF7-205ENST00000439958 FKBP11Q9NYL4 201 aa12.15□□□□□ -0.47
CPSF7-205ENST00000439958 RNASEK-C17orf49H0YIS7 233 aa12.14□□□□□ -0.47
CPSF7-205ENST00000439958 ZNF429Q86V71 674 aa12.14□□□□□ -0.47
CPSF7-205ENST00000439958 SLC39A9Q9NUM3 307 aa12.14□□□□□ -0.47
CPSF7-205ENST00000439958 UMAD1C9J7I0 102 aa12.14□□□□□ -0.47
CPSF7-205ENST00000439958 VDAC2P45880 294 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-205ENST00000439958 TMEM177Q53S58 311 aa12.14□□□□□ -0.47
CPSF7-205ENST00000439958 TPTE2P1Q5T6R2 138 aa12.14□□□□□ -0.47
CPSF7-205ENST00000439958 RARRES2Q99969 163 aa12.14□□□□□ -0.47
CPSF7-205ENST00000439958 KIAA1456Q9P272 454 aa12.14□□□□□ -0.47
CPSF7-205ENST00000439958 LMO4P61968 165 aa12.14□□□□□ -0.47
CPSF7-205ENST00000439958 GUK1Q16774 197 aa12.14□□□□□ -0.47
CPSF7-205ENST00000439958 BET1LQ9NYM9 111 aa12.14□□□□□ -0.47
CPSF7-205ENST00000439958 SETD2Q9BYW2 2564 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-205ENST00000439958 A0A087X0M5 115 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 A0A1B0GX30 115 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 FCN1O00602 326 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 GATA2P23769 480 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-205ENST00000439958 RAB5CP51148 216 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 PRCDQ00LT1 54 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 MIC13Q5XKP0 118 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 BEND2Q8NDZ0 799 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 ARV1Q9H2C2 271 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 KRBOX1C9JBD0 128 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 OVOL3O00110 214 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 FOXH1O75593 365 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 RUSC1-AS1Q66K80 236 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 LY6G5BQ8NDX9 201 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 TNFRSF14Q92956 283 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 C20orf24Q9BUV8 137 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 NPCDR1Q9BY65 106 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 AUP1Q9Y679 476 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 TENM4Q6N022 2769 aa12.13□□□□□ -0.47
CPSF7-205ENST00000439958 SNRNP70P08621 437 aaKnown RBP12.12□□□□□ -0.47
CPSF7-205ENST00000439958 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
CPSF7-205ENST00000439958 KRTAP10-9P60411 292 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 BTN1A1Q13410 526 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 OR10G4Q8NGN3 311 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 OR10G9Q8NGN4 311 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 OR10G7Q8NGN6 311 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 OR5B3Q8NH48 314 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 RXFP4Q8TDU9 374 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 KLF2Q9Y5W3 355 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-205ENST00000439958 IGHV2-70DA0A0C4DH43 119 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 LGALS7P47929 136 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 C8orf46Q8TAG6 207 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 MYO9AB2RTY4 2548 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 ABCA2Q9BZC7 2435 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 TRAV40A0A0B4J280 105 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 A0A1W2PPV4 95 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 FAM90A9PA6NNJ1 464 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 A8MXK9 166 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 M0R1W7 72 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 FBP1P09467 338 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 SFTA3P0C7M3 94 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 AREGP15514 252 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 PSG5Q15238 335 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 ACSM6Q6P461 480 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 PPP1R27Q86WC6 154 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 TMEM170AQ8WVE7 144 aa12.12□□□□□ -0.47
CPSF7-205ENST00000439958 C17orf112F2Z3M2 114 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 TRIM77I1YAP6 450 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 ZP3P21754 424 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 OR52E5Q8NH55 327 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 S4R3C0 116 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 MAP1LC3B2A6NCE7 125 aa12.11□□□□□ -0.47
CPSF7-205ENST00000439958 SH2D7A6NKC9 451 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-205ENST00000439958 SNRPCP09234 159 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms