RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 FOXA2Q9Y261 457 aaPredicted RBP13.8□□□□□ -0.2
CCDC188-201ENST00000439765 APELAP0DMC3 54 aa13.79□□□□□ -0.2
CCDC188-201ENST00000439765 AKR1C2P52895 323 aa13.79□□□□□ -0.2
CCDC188-201ENST00000439765 ERVK-16P61578 105 aa13.79□□□□□ -0.2
CCDC188-201ENST00000439765 PRSS8Q16651 343 aa13.79□□□□□ -0.2
CCDC188-201ENST00000439765 TMEM65Q6PI78 240 aa13.79□□□□□ -0.2
CCDC188-201ENST00000439765 CADM3Q8N126 398 aa13.79□□□□□ -0.2
CCDC188-201ENST00000439765 TEX45Q8NA69 505 aa13.79□□□□□ -0.2
CCDC188-201ENST00000439765 LSM10Q969L4 123 aaKnown RBP13.79□□□□□ -0.2
CCDC188-201ENST00000439765 RRNAD1Q96FB5 475 aaKnown RBP13.79□□□□□ -0.2
CCDC188-201ENST00000439765 ZNF430Q9H8G1 570 aaPredicted RBP13.79□□□□□ -0.2
CCDC188-201ENST00000439765 TMED3Q9Y3Q3 217 aa13.79□□□□□ -0.2
CCDC188-201ENST00000439765 A0A1B0GVG6 124 aa13.78□□□□□ -0.2
CCDC188-201ENST00000439765 ADAP1O75689 374 aa13.78□□□□□ -0.2
CCDC188-201ENST00000439765 IGLV1-40P01703 118 aa13.78□□□□□ -0.2
CCDC188-201ENST00000439765 IL6RP08887 468 aaPredicted RBP13.78□□□□□ -0.2
CCDC188-201ENST00000439765 P0C879 139 aa13.78□□□□□ -0.2
CCDC188-201ENST00000439765 TMEM267Q0VDI3 215 aaPredicted RBP13.78□□□□□ -0.2
CCDC188-201ENST00000439765 DEFB136Q30KP8 78 aa13.78□□□□□ -0.2
CCDC188-201ENST00000439765 NMSQ5H8A3 153 aa13.78□□□□□ -0.2
CCDC188-201ENST00000439765 GGNBP1Q5YKI7 109 aa13.78□□□□□ -0.2
CCDC188-201ENST00000439765 OR4A47Q6IF82 309 aa13.78□□□□□ -0.2
CCDC188-201ENST00000439765 FAM219AQ8IW50 185 aa13.78□□□□□ -0.2
CCDC188-201ENST00000439765 PUSL1Q8N0Z8 303 aaKnown RBP13.78□□□□□ -0.2
CCDC188-201ENST00000439765 DUX3Q96PT4 197 aa13.78□□□□□ -0.2
CCDC188-201ENST00000439765 MED28Q9H204 178 aa13.78□□□□□ -0.2
CCDC188-201ENST00000439765 A0A0G2JRQ6 117 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 KBTBD11O94819 623 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 OR2A4O95047 310 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 IFNA21P01568 189 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 HLA-GP17693 338 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 RRAS2P62070 204 aaPredicted RBP13.77□□□□□ -0.21
CCDC188-201ENST00000439765 C10orf55Q5SWW7 151 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 ETV3LQ6ZN32 361 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 H2BFWTQ7Z2G1 175 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 RNASE11Q8TAA1 199 aaKnown RBP13.77□□□□□ -0.21
CCDC188-201ENST00000439765 VSTM2AQ8TAG5 236 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 SRSF12Q8WXF0 261 aaKnown RBP13.77□□□□□ -0.21
CCDC188-201ENST00000439765 GPR146Q96CH1 333 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 OR2A7Q96R45 310 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 TMEM140Q9NV12 185 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 BET1LQ9NYM9 111 aa13.77□□□□□ -0.21
CCDC188-201ENST00000439765 ACTL6BO94805 426 aa13.76□□□□□ -0.21
CCDC188-201ENST00000439765 AKIRIN2Q53H80 203 aa13.76□□□□□ -0.21
CCDC188-201ENST00000439765 MYOZ3Q8TDC0 251 aa13.76□□□□□ -0.21
CCDC188-201ENST00000439765 hCG_2014768A0A024R1R8 64 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 CCSO14618 274 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 OR9G9P0C7N8 305 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 CDX1P47902 265 aaPredicted RBP13.75□□□□□ -0.21
CCDC188-201ENST00000439765 RAB9AP51151 201 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 FCN2Q15485 313 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 IZUMO4Q1ZYL8 232 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 Q6ZRM9 215 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 REC114Q7Z4M0 266 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 MMD2Q8IY49 270 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 OR4A5Q8NH83 315 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 TMEM167AQ8TBQ9 72 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 MS4A10Q96PG2 267 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 OR5B12Q96R08 314 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 MGAT4CQ9UBM8 478 aa13.75□□□□□ -0.21
CCDC188-201ENST00000439765 TRAV3A0A0B4J244 114 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 MPTX1A8MV57 137 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 UPK2O00526 184 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 GOSR2O14653 212 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 SULT1A3P0DMM9 295 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 SULT1A4P0DMN0 295 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 CD33P20138 364 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 ASPHD1Q5U4P2 390 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 OR5T1Q8NG75 326 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 OR5M8Q8NGP6 311 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 C4orf3Q8WVX3 66 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 RAX2Q96IS3 184 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 GNB4Q9HAV0 340 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 ZNF355PQ9NSJ1 428 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 A0A1B0GU03 582 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 HMX3A6NHT5 357 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 MSGN1A6NI15 193 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 SLC25A6P12236 298 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 TPPP2P59282 170 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 OXLD1Q5BKU9 147 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 GSG1LQ6UXU4 331 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 ZNF491Q8N8L2 437 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 WFDC9Q8NEX5 89 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 OR10C1Q96KK4 312 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 CACNG5Q9UF02 275 aa13.74□□□□□ -0.21
CCDC188-201ENST00000439765 C13orf42A0A1B0GVH6 325 aa13.73□□□□□ -0.21
CCDC188-201ENST00000439765 C5orf51A6NDU8 294 aa13.73□□□□□ -0.21
CCDC188-201ENST00000439765 FAM25EA8MYX2 175 aa13.73□□□□□ -0.21
CCDC188-201ENST00000439765 SNAPC5O75971 98 aa13.73□□□□□ -0.21
CCDC188-201ENST00000439765 SIX6O95475 246 aa13.73□□□□□ -0.21
CCDC188-201ENST00000439765 CXCL3P19876 107 aa13.73□□□□□ -0.21
CCDC188-201ENST00000439765 DEFA5Q01523 94 aa13.73□□□□□ -0.21
CCDC188-201ENST00000439765 KIAA0141Q14154 515 aaPredicted RBP13.73□□□□□ -0.21
CCDC188-201ENST00000439765 MRPL41Q8IXM3 137 aaKnown RBP13.73□□□□□ -0.21
CCDC188-201ENST00000439765 OR11H7Q8NGC8 314 aa13.73□□□□□ -0.21
CCDC188-201ENST00000439765 OR4A16Q8NH70 328 aa13.73□□□□□ -0.21
CCDC188-201ENST00000439765 UBE2E2Q96LR5 201 aa13.73□□□□□ -0.21
CCDC188-201ENST00000439765 SPIN2AQ99865 258 aa13.73□□□□□ -0.21
CCDC188-201ENST00000439765 SPIN2BQ9BPZ2 258 aa13.73□□□□□ -0.21
CCDC188-201ENST00000439765 COA4Q9NYJ1 87 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms