RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 TNFSF15O95150 251 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 CRYBA4P53673 196 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 SELENOVP59797 346 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 CEACAM21Q3KPI0 293 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 TMEM144Q7Z5S9 345 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 KIAA1549Q9HCM3 1950 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.25□□□□□ -0.29
DHFR-201ENST00000439211 C10orf142B7Z368 130 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 WNT2P09544 360 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 GUCD1Q96NT3 240 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 JKAMPQ9P055 326 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 SERTM2A0A1B0GWG4 89 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 ARG2P78540 354 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 PMS2CLQ68D20 193 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 DEFB125Q8N687 156 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 TSKUQ8WUA8 353 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 CFAP54Q96N23 3096 aa13.25□□□□□ -0.29
DHFR-201ENST00000439211 TRBV9A0A0B4J1U6 114 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 PPIAL4CA0A0B4J2A2 164 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 HLA-DQA1P01909 254 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 PPIAL4GP0DN37 164 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 UCP1P25874 307 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 OR1C1Q15619 314 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 GGNQ86UU5 652 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 G3V4G9 280 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 FRMD6-AS1P0C7T7 363 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 NMSQ5H8A3 153 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 CNEP1R1Q8N9A8 125 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 OR10AG1Q8NH19 301 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 PERPQ96FX8 193 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 CDX2Q99626 313 aaPredicted RBP13.24□□□□□ -0.29
DHFR-201ENST00000439211 GPR183P32249 361 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 PMCHL2Q9BQD1 86 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 CHODLQ9H9P2 273 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 KCNIP2Q9NS61 270 aa13.24□□□□□ -0.29
DHFR-201ENST00000439211 PINLYPA6NC86 204 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 CDIPTO14735 213 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 OR10J3Q5JRS4 329 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 PPP1R32Q7Z5V6 425 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 CENPVQ7Z7K6 275 aaPredicted RBP13.23□□□□□ -0.29
DHFR-201ENST00000439211 RFESDQ8TAC1 157 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 RPL31P62899 125 aaKnown RBP13.23□□□□□ -0.29
DHFR-201ENST00000439211 FAM173AQ9BQD7 235 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 LY6G6EA0A0G2JKS1 128 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 MFAP2P55001 183 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 TFF3Q07654 80 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 TNXAQ16473 311 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 DOLPP1Q86YN1 238 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 OR5A2Q8NGI9 324 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 RNF138Q8WVD3 245 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 GP6Q9HCN6 339 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 U3KQA8 63 aa13.23□□□□□ -0.29
DHFR-201ENST00000439211 FABP2P12104 132 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 GATA2P23769 480 aaPredicted RBP13.22□□□□□ -0.29
DHFR-201ENST00000439211 LINC00310P59036 64 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 COX19Q49B96 90 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 GNB1LQ9BYB4 327 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 LIN7CQ9NUP9 197 aaKnown RBP13.22□□□□□ -0.29
DHFR-201ENST00000439211 CELSR3Q9NYQ7 3312 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 A0A0G2JRQ6 117 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 H0Y980 276 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 EDDM3AQ14507 147 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 RTL8AQ9BWD3 113 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 PRDM14Q9GZV8 571 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 ST20Q9HBF5 79 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 DECR2Q9NUI1 292 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 ADH4P08319 380 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 FOXL2NBQ6ZUU3 175 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 REPIN1Q9BWE0 567 aaKnown RBP13.22□□□□□ -0.29
DHFR-201ENST00000439211 HINT2Q9BX68 163 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 IL36GQ9NZH8 169 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 PRR14LQ5THK1 2151 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 ATRXP46100 2492 aa13.22□□□□□ -0.29
DHFR-201ENST00000439211 FAM181BA6NEQ2 426 aa13.21□□□□□ -0.29
DHFR-201ENST00000439211 IGLC1P0CG04 106 aa13.21□□□□□ -0.29
DHFR-201ENST00000439211 NPPCP23582 126 aa13.21□□□□□ -0.29
DHFR-201ENST00000439211 HSD52Q0P140 79 aa13.21□□□□□ -0.29
DHFR-201ENST00000439211 TMEM42Q69YG0 159 aa13.21□□□□□ -0.29
DHFR-201ENST00000439211 OR2M7Q8NG81 312 aa13.21□□□□□ -0.29
DHFR-201ENST00000439211 C1QTNF5Q9BXJ0 243 aa13.21□□□□□ -0.29
DHFR-201ENST00000439211 DLL3Q9NYJ7 618 aa13.21□□□□□ -0.29
DHFR-201ENST00000439211 MRPL27Q9P0M9 148 aaKnown RBP13.21□□□□□ -0.29
DHFR-201ENST00000439211 SSTR5P35346 364 aa13.21□□□□□ -0.29
DHFR-201ENST00000439211 DEFB108AA8MXU0 73 aa13.21□□□□□ -0.3
DHFR-201ENST00000439211 LEPROTL1O95214 131 aa13.21□□□□□ -0.3
DHFR-201ENST00000439211 MCRIP2Q9BUT9 160 aaKnown RBP13.21□□□□□ -0.3
DHFR-201ENST00000439211 USF3Q68DE3 2245 aa13.21□□□□□ -0.3
DHFR-201ENST00000439211 ARL14EPLP0DKL9 152 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 APOBEC3AP31941 199 aaPredicted RBP13.2□□□□□ -0.3
DHFR-201ENST00000439211 LGALS7P47929 136 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 TBC1D28Q2M2D7 210 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 GCSAMLQ5JQS6 135 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 UBALD2Q8IYN6 164 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 CADP27708 2225 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 DKK1O94907 266 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 AMY1AP04745 511 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 B3GALT5-AS1P59052 145 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 TSSC4Q9Y5U2 329 aaPredicted RBP13.2□□□□□ -0.3
DHFR-201ENST00000439211 IGHV3-43A0A0B4J1X8 118 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 IGHV3-13P01766 116 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms