RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 FAM162BQ5T6X4 162 aa10.27□□□□□ -0.77
TCOF1-205ENST00000439160 S4R3C0 116 aa10.27□□□□□ -0.77
TCOF1-205ENST00000439160 ARL2-SNX15V9GYD0 113 aa10.27□□□□□ -0.77
TCOF1-205ENST00000439160 IGF2RP11717 2491 aa10.27□□□□□ -0.77
TCOF1-205ENST00000439160 YPEL1O60688 119 aa10.27□□□□□ -0.77
TCOF1-205ENST00000439160 FCGR2BP31994 310 aaPredicted RBP10.27□□□□□ -0.77
TCOF1-205ENST00000439160 C18orf12Q96KH6 178 aa10.27□□□□□ -0.77
TCOF1-205ENST00000439160 YPEL2Q96QA6 119 aa10.27□□□□□ -0.77
TCOF1-205ENST00000439160 RRHO14718 337 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 PRR30Q53SZ7 412 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-205ENST00000439160 PRNTQ86SH4 94 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 WDR31Q8NA23 367 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 OR1L6Q8NGR2 347 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 LTBP2Q14767 1821 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 NAPSAO96009 420 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 HIST1H1BP16401 226 aaKnown RBP10.26□□□□□ -0.77
TCOF1-205ENST00000439160 TFF3Q07654 80 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 TOMM20LQ6UXN7 152 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 C5orf17Q8NAS9 161 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 OR2D3Q8NGH3 330 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 PRSS3P2Q8NHM4 247 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 HS3ST6Q96QI5 342 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 C8orf88P0DMB2 117 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 HTN1P15515 57 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 CD24P25063 80 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 AMTP48728 403 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 MBNL2Q5VZF2 373 aaKnown RBP10.26□□□□□ -0.77
TCOF1-205ENST00000439160 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-205ENST00000439160 TMEM208Q9BTX3 173 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 NPCDR1Q9BY65 106 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 CSPG4Q6UVK1 2322 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 FREM1Q5H8C1 2179 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 SNURFLB1AK76 121 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 F5H697 171 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 HLA-DRB5Q30154 266 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 WDR73Q6P4I2 378 aa10.26□□□□□ -0.77
TCOF1-205ENST00000439160 PACRGQ96M98 296 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-205ENST00000439160 MLNRO43193 412 aa10.25□□□□□ -0.77
TCOF1-205ENST00000439160 IGKV1D-33P01593 117 aa10.25□□□□□ -0.77
TCOF1-205ENST00000439160 IGKV1-33P01594 117 aa10.25□□□□□ -0.77
TCOF1-205ENST00000439160 TRGC2P03986 189 aa10.25□□□□□ -0.77
TCOF1-205ENST00000439160 FAM3BP58499 235 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-205ENST00000439160 PSMG3Q9BT73 122 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-205ENST00000439160 CD55P08174 381 aa10.25□□□□□ -0.77
TCOF1-205ENST00000439160 MFAP4P55083 255 aa10.25□□□□□ -0.77
TCOF1-205ENST00000439160 SRSF3P84103 164 aaKnown RBP10.25□□□□□ -0.77
TCOF1-205ENST00000439160 UFC1Q9Y3C8 167 aa10.25□□□□□ -0.77
TCOF1-205ENST00000439160 CRYBB3P26998 211 aa10.25□□□□□ -0.77
TCOF1-205ENST00000439160 BPIFA4PQ86YQ2 179 aa10.25□□□□□ -0.77
TCOF1-205ENST00000439160 HIST1H2BAQ96A08 127 aa10.25□□□□□ -0.77
TCOF1-205ENST00000439160 IGHV3OR16-13A0A075B7E8 117 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 IGHV3-74A0A0B4J1X5 117 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 LRRC75BQ2VPJ9 315 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 CD177Q8N6Q3 437 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 NHLRC2Q8NBF2 726 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 OR51G1Q8NGK1 321 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 SAA1P0DJI8 122 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-205ENST00000439160 HIST1H1EP10412 219 aaKnown RBP10.24□□□□□ -0.77
TCOF1-205ENST00000439160 GATA2P23769 480 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-205ENST00000439160 DUTP33316 252 aaKnown RBP10.24□□□□□ -0.77
TCOF1-205ENST00000439160 ZNF137PP52743 207 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 MFAP2P55001 183 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 ID3Q02535 119 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 NPIPB11E5RHQ5 1161 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 IGKV3-15P01624 115 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 ACAA1P09110 424 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-205ENST00000439160 IGFBP2P18065 325 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 TFPI2P48307 235 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 BIVMQ86UB2 503 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 CBLN4Q9NTU7 201 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 MSRB2Q9Y3D2 182 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 PCDH15Q96QU1 1955 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 IL6RP08887 468 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-205ENST00000439160 WDR25Q64LD2 544 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-205ENST00000439160 GPR61Q9BZJ8 451 aa10.24□□□□□ -0.77
TCOF1-205ENST00000439160 DNAH12Q6ZR08 3092 aa10.23□□□□□ -0.77
TCOF1-205ENST00000439160 ZNF525Q8N782 197 aa10.23□□□□□ -0.77
TCOF1-205ENST00000439160 FAM168AQ92567 244 aa10.23□□□□□ -0.77
TCOF1-205ENST00000439160 PARLQ9H300 379 aa10.23□□□□□ -0.77
TCOF1-205ENST00000439160 CGB1A6NKQ9 187 aa10.23□□□□□ -0.77
TCOF1-205ENST00000439160 COMPP49747 757 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-205ENST00000439160 IFI27L2Q9H2X8 130 aa10.23□□□□□ -0.77
TCOF1-205ENST00000439160 PITPNC1Q9UKF7 332 aa10.23□□□□□ -0.77
TCOF1-205ENST00000439160 ZNF503-AS2A6NEH8 195 aa10.23□□□□□ -0.77
TCOF1-205ENST00000439160 RSPO1Q2MKA7 263 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-205ENST00000439160 COLCA1Q6ZS62 124 aa10.23□□□□□ -0.77
TCOF1-205ENST00000439160 GATAD1Q8WUU5 269 aa10.23□□□□□ -0.77
TCOF1-205ENST00000439160 TXNDC17Q9BRA2 123 aa10.23□□□□□ -0.77
TCOF1-205ENST00000439160 DOCK11Q5JSL3 2073 aa10.23□□□□□ -0.77
TCOF1-205ENST00000439160 DPRXA6NFQ7 191 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 IL4P05112 153 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 TMEM133Q9H2Q1 129 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 OR51M1Q9H341 326 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 PRR14LQ5THK1 2151 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 YLPM1P49750 1951 aaKnown RBP10.22□□□□□ -0.77
TCOF1-205ENST00000439160 PTPN13Q12923 2485 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 FCER1GP30273 86 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 IQCJQ1A5X6 159 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 ZNF672Q499Z4 452 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-205ENST00000439160 PIP4P1Q86T03 277 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms