RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PRNDQ9UKY0 176 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 PPP5CP53041 499 aa18.94■□□□□ 0.62
RAPGEF1-206ENST00000438647 C19orf35Q6ZS72 473 aa18.94■□□□□ 0.62
RAPGEF1-206ENST00000438647 CCDC71LQ8N9Z2 235 aa18.94■□□□□ 0.62
RAPGEF1-206ENST00000438647 THYN1Q9P016 225 aa18.94■□□□□ 0.62
RAPGEF1-206ENST00000438647 COPZ2Q9P299 210 aa18.94■□□□□ 0.62
RAPGEF1-206ENST00000438647 OR51B2Q9Y5P1 312 aa18.94■□□□□ 0.62
RAPGEF1-206ENST00000438647 TEX50A0A1B0GTY4 177 aa18.93■□□□□ 0.62
RAPGEF1-206ENST00000438647 FABP12A6NFH5 140 aa18.93■□□□□ 0.62
RAPGEF1-206ENST00000438647 DISC1C4P0D8 188 aa18.93■□□□□ 0.62
RAPGEF1-206ENST00000438647 H0Y980 276 aa18.93■□□□□ 0.62
RAPGEF1-206ENST00000438647 AKAIN1P0CW23 69 aa18.93■□□□□ 0.62
RAPGEF1-206ENST00000438647 OR5B3Q8NH48 314 aa18.93■□□□□ 0.62
RAPGEF1-206ENST00000438647 EEF1AKMT3Q96AZ1 226 aa18.93■□□□□ 0.62
RAPGEF1-206ENST00000438647 SORL1Q92673 2214 aa18.93■□□□□ 0.62
RAPGEF1-206ENST00000438647 IGLV11-55A0A075B6I3 123 aa18.92■□□□□ 0.62
RAPGEF1-206ENST00000438647 BMPR1BO00238 502 aa18.92■□□□□ 0.62
RAPGEF1-206ENST00000438647 GSTZ1O43708 216 aaPredicted RBP18.92■□□□□ 0.62
RAPGEF1-206ENST00000438647 PI3P19957 117 aa18.92■□□□□ 0.62
RAPGEF1-206ENST00000438647 TNFSF8P32971 234 aa18.92■□□□□ 0.62
RAPGEF1-206ENST00000438647 H2BFWTQ7Z2G1 175 aa18.92■□□□□ 0.62
RAPGEF1-206ENST00000438647 LSM10Q969L4 123 aaKnown RBP18.92■□□□□ 0.62
RAPGEF1-206ENST00000438647 SEC22AQ96IW7 307 aa18.92■□□□□ 0.62
RAPGEF1-206ENST00000438647 CXorf58Q96LI9 332 aa18.92■□□□□ 0.62
RAPGEF1-206ENST00000438647 NDUFA4L2Q9NRX3 87 aa18.92■□□□□ 0.62
RAPGEF1-206ENST00000438647 PEMTQ9UBM1 199 aa18.92■□□□□ 0.62
RAPGEF1-206ENST00000438647 NSG2Q9Y328 171 aa18.92■□□□□ 0.62
RAPGEF1-206ENST00000438647 C15orf61A6NNL5 157 aa18.91■□□□□ 0.62
RAPGEF1-206ENST00000438647 NDUFB8O95169 186 aa18.91■□□□□ 0.62
RAPGEF1-206ENST00000438647 GDPD1Q8N9F7 314 aa18.91■□□□□ 0.62
RAPGEF1-206ENST00000438647 OR10W1Q8NGF6 305 aa18.91■□□□□ 0.62
RAPGEF1-206ENST00000438647 OR13C8Q8NGS7 320 aa18.91■□□□□ 0.62
RAPGEF1-206ENST00000438647 MRGPRFQ96AM1 343 aa18.91■□□□□ 0.62
RAPGEF1-206ENST00000438647 TMEM56Q96MV1 263 aa18.91■□□□□ 0.62
RAPGEF1-206ENST00000438647 B9D2Q9BPU9 175 aa18.91■□□□□ 0.62
RAPGEF1-206ENST00000438647 HINT2Q9BX68 163 aa18.91■□□□□ 0.62
RAPGEF1-206ENST00000438647 TMEM14BQ9NUH8 114 aa18.91■□□□□ 0.62
RAPGEF1-206ENST00000438647 LSM4Q9Y4Z0 139 aaKnown RBP18.91■□□□□ 0.62
RAPGEF1-206ENST00000438647 ZNF701M0R085 212 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 B3GALNT1O75752 331 aa18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 ATG12O94817 140 aa18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 IGKV1-39P01597 117 aa18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 IGKV1D-39P04432 117 aa18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 CTSDP07339 412 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 OR13C7P0DN81 318 aa18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 SPNP16150 400 aa18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 CD69Q07108 199 aa18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 OR4A16Q8NH70 328 aa18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 MARCH1Q8TCQ1 289 aa18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 PRRT1Q99946 306 aa18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 C14orf166Q9Y224 244 aaKnown RBP18.9■□□□□ 0.62
RAPGEF1-206ENST00000438647 TRBV7-1A0A0A6YYK4 115 aa18.89■□□□□ 0.61
RAPGEF1-206ENST00000438647 C3orf85A0A1B0GTC6 90 aa18.89■□□□□ 0.61
RAPGEF1-206ENST00000438647 GGCTO75223 188 aaKnown RBP18.89■□□□□ 0.61
RAPGEF1-206ENST00000438647 IGLV1-51P01701 117 aa18.89■□□□□ 0.61
RAPGEF1-206ENST00000438647 SURF2Q15527 256 aaPredicted RBP18.89■□□□□ 0.61
RAPGEF1-206ENST00000438647 FAAP20Q6NZ36 180 aa18.89■□□□□ 0.61
RAPGEF1-206ENST00000438647 OR4C16Q8NGL9 310 aa18.89■□□□□ 0.61
RAPGEF1-206ENST00000438647 SOSTQ9BQB4 213 aa18.89■□□□□ 0.61
RAPGEF1-206ENST00000438647 RBM38Q9H0Z9 239 aaKnown RBP18.89■□□□□ 0.61
RAPGEF1-206ENST00000438647 SIGLEC8Q9NYZ4 499 aa18.89■□□□□ 0.61
RAPGEF1-206ENST00000438647 ANKRD20A5PA0PJZ0 165 aa18.88■□□□□ 0.61
RAPGEF1-206ENST00000438647 GP9P14770 177 aa18.88■□□□□ 0.61
RAPGEF1-206ENST00000438647 S100A5P33763 92 aa18.88■□□□□ 0.61
RAPGEF1-206ENST00000438647 WT1-ASQ06250 92 aa18.88■□□□□ 0.61
RAPGEF1-206ENST00000438647 CCDC140Q96MF4 163 aa18.88■□□□□ 0.61
RAPGEF1-206ENST00000438647 TP53RKQ96S44 253 aa18.88■□□□□ 0.61
RAPGEF1-206ENST00000438647 DNAH9Q9NYC9 4486 aa18.88■□□□□ 0.61
RAPGEF1-206ENST00000438647 PPP5D1E7EU14 171 aa18.87■□□□□ 0.61
RAPGEF1-206ENST00000438647 ARL3P36405 182 aa18.87■□□□□ 0.61
RAPGEF1-206ENST00000438647 MECP2P51608 486 aaKnown RBP18.87■□□□□ 0.61
RAPGEF1-206ENST00000438647 AKR1C2P52895 323 aa18.87■□□□□ 0.61
RAPGEF1-206ENST00000438647 CLEC19AQ6UXS0 136 aa18.87■□□□□ 0.61
RAPGEF1-206ENST00000438647 IL34Q6ZMJ4 242 aa18.87■□□□□ 0.61
RAPGEF1-206ENST00000438647 OR1L6Q8NGR2 347 aa18.87■□□□□ 0.61
RAPGEF1-206ENST00000438647 IGHV3-23P01764 117 aa18.86■□□□□ 0.61
RAPGEF1-206ENST00000438647 TRIM16LQ309B1 348 aa18.86■□□□□ 0.61
RAPGEF1-206ENST00000438647 SLC25A24Q6NUK1 477 aa18.86■□□□□ 0.61
RAPGEF1-206ENST00000438647 SLC2A8Q9NY64 477 aa18.86■□□□□ 0.61
RAPGEF1-206ENST00000438647 SCP2D1Q9UJQ7 156 aa18.86■□□□□ 0.61
RAPGEF1-206ENST00000438647 DMRT1Q9Y5R6 373 aa18.86■□□□□ 0.61
RAPGEF1-206ENST00000438647 F11RQ9Y624 299 aaKnown RBP18.86■□□□□ 0.61
RAPGEF1-206ENST00000438647 SMAD5-AS1Q9Y6J3 95 aa18.86■□□□□ 0.61
RAPGEF1-206ENST00000438647 MFSD2BA6NFX1 497 aa18.85■□□□□ 0.61
RAPGEF1-206ENST00000438647 DBX1A6NMT0 343 aa18.85■□□□□ 0.61
RAPGEF1-206ENST00000438647 CSN3P07498 182 aa18.85■□□□□ 0.61
RAPGEF1-206ENST00000438647 HAPLN4Q86UW8 402 aa18.85■□□□□ 0.61
RAPGEF1-206ENST00000438647 VN1R17PQ8TDU5 208 aa18.85■□□□□ 0.61
RAPGEF1-206ENST00000438647 S4R3C0 116 aa18.85■□□□□ 0.61
RAPGEF1-206ENST00000438647 OR2C1O95371 312 aa18.84■□□□□ 0.61
RAPGEF1-206ENST00000438647 UCP1P25874 307 aa18.84■□□□□ 0.61
RAPGEF1-206ENST00000438647 GPHB5Q86YW7 130 aa18.84■□□□□ 0.61
RAPGEF1-206ENST00000438647 OR51S1Q8NGJ8 323 aa18.84■□□□□ 0.61
RAPGEF1-206ENST00000438647 SCGB3A2Q96PL1 93 aa18.84■□□□□ 0.61
RAPGEF1-206ENST00000438647 THAP7Q9BT49 309 aaPredicted RBP18.84■□□□□ 0.61
RAPGEF1-206ENST00000438647 TEX13DA0A0J9YY54 714 aaPredicted RBP18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 LGALS9O00182 355 aa18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 HLA-AP01891 365 aaKnown RBP18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 CLEC3BP05452 202 aa18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 HSPE1P61604 102 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms