RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 SIRPDQ9H106 197 aa12.4□□□□□ -0.42
SGCE-205ENST00000437425 TREM1Q9NP99 234 aa12.4□□□□□ -0.42
SGCE-205ENST00000437425 KIAA1456Q9P272 454 aa12.4□□□□□ -0.42
SGCE-205ENST00000437425 HRNRQ86YZ3 2850 aaPredicted RBP12.4□□□□□ -0.42
SGCE-205ENST00000437425 RNASEK-C17orf49H0YIS7 233 aa12.39□□□□□ -0.43
SGCE-205ENST00000437425 SLC25A17O43808 307 aa12.39□□□□□ -0.43
SGCE-205ENST00000437425 CA2P00918 260 aa12.39□□□□□ -0.43
SGCE-205ENST00000437425 COMPP49747 757 aaPredicted RBP12.39□□□□□ -0.43
SGCE-205ENST00000437425 FHITP49789 147 aa12.39□□□□□ -0.43
SGCE-205ENST00000437425 ATP5J2P56134 94 aa12.39□□□□□ -0.43
SGCE-205ENST00000437425 C10orf105Q8TEF2 133 aa12.39□□□□□ -0.43
SGCE-205ENST00000437425 MBD3L1Q8WWY6 194 aa12.39□□□□□ -0.43
SGCE-205ENST00000437425 CACNG8Q8WXS5 425 aa12.39□□□□□ -0.43
SGCE-205ENST00000437425 SRSF8Q9BRL6 282 aaKnown RBP12.39□□□□□ -0.43
SGCE-205ENST00000437425 SEC11CQ9BY50 192 aa12.39□□□□□ -0.43
SGCE-205ENST00000437425 ZNF430Q9H8G1 570 aaPredicted RBP12.39□□□□□ -0.43
SGCE-205ENST00000437425 LPAR2Q9HBW0 351 aa12.39□□□□□ -0.43
SGCE-205ENST00000437425 TOX4O94842 621 aa12.38□□□□□ -0.43
SGCE-205ENST00000437425 CRYGBP07316 175 aa12.38□□□□□ -0.43
SGCE-205ENST00000437425 RNF224P0DH78 156 aa12.38□□□□□ -0.43
SGCE-205ENST00000437425 GPX4P36969 197 aaPredicted RBP12.38□□□□□ -0.43
SGCE-205ENST00000437425 UBE2E1P51965 193 aa12.38□□□□□ -0.43
SGCE-205ENST00000437425 LCN2P80188 198 aa12.38□□□□□ -0.43
SGCE-205ENST00000437425 PSG5Q15238 335 aa12.38□□□□□ -0.43
SGCE-205ENST00000437425 PRSS8Q16651 343 aa12.38□□□□□ -0.43
SGCE-205ENST00000437425 GUK1Q16774 197 aa12.38□□□□□ -0.43
SGCE-205ENST00000437425 TUSC1Q2TAM9 212 aa12.38□□□□□ -0.43
SGCE-205ENST00000437425 HCP5Q6MZN7 132 aa12.38□□□□□ -0.43
SGCE-205ENST00000437425 RNASEH2CQ8TDP1 164 aaKnown RBP12.38□□□□□ -0.43
SGCE-205ENST00000437425 RPRMQ9NS64 109 aa12.38□□□□□ -0.43
SGCE-205ENST00000437425 NAV2Q8IVL1 2488 aa12.38□□□□□ -0.43
SGCE-205ENST00000437425 VWC2LB2RUY7 222 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 OPRK1P41145 380 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 PMS2P11Q13670 270 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
SGCE-205ENST00000437425 C10orf91Q5T1B1 145 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 SP5Q6BEB4 398 aaPredicted RBP12.37□□□□□ -0.43
SGCE-205ENST00000437425 TEPPQ6URK8 271 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 PPP1R27Q86WC6 154 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 SFT2D1Q8WV19 159 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 SIGLEC9Q9Y336 463 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 IGHV3-72A0A0B4J1Y9 119 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 SMCO3A2RU48 225 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 J3QKU1 62 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 TIMM23O14925 209 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 CYB5BO43169 146 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 VENTXO95231 258 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 MOSP00540 346 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 RNASE2P10153 161 aaKnown RBP12.37□□□□□ -0.43
SGCE-205ENST00000437425 HOXB4P17483 251 aaPredicted RBP12.37□□□□□ -0.43
SGCE-205ENST00000437425 TAGLN2P37802 199 aaKnown RBP12.37□□□□□ -0.43
SGCE-205ENST00000437425 TREML4Q6UXN2 200 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 SVBPQ8N300 66 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 TMEM170AQ8WVE7 144 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 MALSU1Q96EH3 234 aa12.37□□□□□ -0.43
SGCE-205ENST00000437425 ACTR3CQ9C0K3 210 aaPredicted RBP12.37□□□□□ -0.43
SGCE-205ENST00000437425 EIF5A2Q9GZV4 153 aaKnown RBP12.37□□□□□ -0.43
SGCE-205ENST00000437425 METTL1Q9UBP6 276 aaKnown RBP12.37□□□□□ -0.43
SGCE-205ENST00000437425 CARHSP1Q9Y2V2 147 aaKnown RBP12.37□□□□□ -0.43
SGCE-205ENST00000437425 F8W036 122 aa12.36□□□□□ -0.43
SGCE-205ENST00000437425 AGPAT2O15120 278 aa12.36□□□□□ -0.43
SGCE-205ENST00000437425 SNRNP70P08621 437 aaKnown RBP12.36□□□□□ -0.43
SGCE-205ENST00000437425 M6PRP20645 277 aa12.36□□□□□ -0.43
SGCE-205ENST00000437425 RPL27AP46776 148 aaKnown RBP12.36□□□□□ -0.43
SGCE-205ENST00000437425 FFAR4Q5NUL3 377 aa12.36□□□□□ -0.43
SGCE-205ENST00000437425 SPSB3Q6PJ21 355 aa12.36□□□□□ -0.43
SGCE-205ENST00000437425 ZNF114Q8NC26 417 aa12.36□□□□□ -0.43
SGCE-205ENST00000437425 NPBQ8NG41 125 aa12.36□□□□□ -0.43
SGCE-205ENST00000437425 OR2T10Q8NGZ9 312 aa12.36□□□□□ -0.43
SGCE-205ENST00000437425 CFHR4Q92496 578 aa12.36□□□□□ -0.43
SGCE-205ENST00000437425 SLC39A9Q9NUM3 307 aa12.36□□□□□ -0.43
SGCE-205ENST00000437425 LSM4Q9Y4Z0 139 aaKnown RBP12.36□□□□□ -0.43
SGCE-205ENST00000437425 LRBAP50851 2863 aa12.35□□□□□ -0.43
SGCE-205ENST00000437425 CTXND1A0A1B0GTU2 59 aa12.35□□□□□ -0.43
SGCE-205ENST00000437425 CORTO00230 105 aa12.35□□□□□ -0.43
SGCE-205ENST00000437425 IFNA1P01562 189 aa12.35□□□□□ -0.43
SGCE-205ENST00000437425 APOC3P02656 99 aa12.35□□□□□ -0.43
SGCE-205ENST00000437425 DLX1P56177 255 aa12.35□□□□□ -0.43
SGCE-205ENST00000437425 ETFRF1Q6IPR1 90 aa12.35□□□□□ -0.43
SGCE-205ENST00000437425 TMEM144Q7Z5S9 345 aa12.35□□□□□ -0.43
SGCE-205ENST00000437425 RCC1LQ96I51 464 aaKnown RBP12.35□□□□□ -0.43
SGCE-205ENST00000437425 RFNGQ9Y644 331 aa12.35□□□□□ -0.43
SGCE-205ENST00000437425 RBFOX3A6NFN3 312 aa12.34□□□□□ -0.43
SGCE-205ENST00000437425 NDUFS6O75380 124 aaKnown RBP12.34□□□□□ -0.43
SGCE-205ENST00000437425 OPN1MWP04001 364 aa12.34□□□□□ -0.43
SGCE-205ENST00000437425 OPN1MW2P0DN77 364 aa12.34□□□□□ -0.43
SGCE-205ENST00000437425 OPN1MW3P0DN78 364 aa12.34□□□□□ -0.43
SGCE-205ENST00000437425 MYOD1P15172 320 aa12.34□□□□□ -0.43
SGCE-205ENST00000437425 ELLP55199 621 aaPredicted RBP12.34□□□□□ -0.43
SGCE-205ENST00000437425 AKR1C1Q04828 323 aa12.34□□□□□ -0.43
SGCE-205ENST00000437425 KLRD1Q13241 179 aa12.34□□□□□ -0.43
SGCE-205ENST00000437425 ZNF787Q6DD87 383 aa12.34□□□□□ -0.43
SGCE-205ENST00000437425 OR10G4Q8NGN3 311 aa12.34□□□□□ -0.43
SGCE-205ENST00000437425 OR10G9Q8NGN4 311 aa12.34□□□□□ -0.43
SGCE-205ENST00000437425 OR10G7Q8NGN6 311 aa12.34□□□□□ -0.43
SGCE-205ENST00000437425 HILPDAQ9Y5L2 63 aa12.34□□□□□ -0.43
SGCE-205ENST00000437425 TET2Q6N021 2002 aaPredicted RBP12.34□□□□□ -0.43
SGCE-205ENST00000437425 MYO18BQ8IUG5 2567 aa12.33□□□□□ -0.44
SGCE-205ENST00000437425 NBR2O15453 112 aa12.33□□□□□ -0.44
SGCE-205ENST00000437425 NDUFA3O95167 84 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms