RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 ADAM5Q6NVV9 412 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 SLC25A48Q6ZT89 311 aaKnown RBP6.1□□□□□ -1.43
COL17A1-204ENST00000433822 SSX7Q7RTT5 188 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 LRP11Q86VZ4 500 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 CISD2Q8N5K1 135 aaKnown RBP6.1□□□□□ -1.43
COL17A1-204ENST00000433822 LINC00311Q8N616 119 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 UBALD1Q8TB05 177 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 NANPQ8TBE9 248 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 RAB24Q969Q5 203 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 NEIL1Q96FI4 390 aaPredicted RBP6.1□□□□□ -1.43
COL17A1-204ENST00000433822 GAFA1Q96PS6 74 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 IMMP2LQ96T52 175 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 C12orf57Q99622 126 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 C20orf24Q9BUV8 137 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 C19orf24Q9BVV8 132 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 QTRT1Q9BXR0 403 aaKnown RBP6.1□□□□□ -1.43
COL17A1-204ENST00000433822 GAL3ST2Q9H3Q3 398 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 VSIRQ9H7M9 311 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 NPVFQ9HCQ7 196 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 BET1LQ9NYM9 111 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 DOK5Q9P104 306 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 RPUSD1Q9UJJ7 312 aaKnown RBP6.1□□□□□ -1.43
COL17A1-204ENST00000433822 FZR1Q9UM11 496 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 TCF19Q9Y242 345 aa6.1□□□□□ -1.43
COL17A1-204ENST00000433822 RP1L1Q8IWN7 2480 aaPredicted RBP6.1□□□□□ -1.43
COL17A1-204ENST00000433822 PRR14LQ5THK1 2151 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 IGHV3-43A0A0B4J1X8 118 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 A0A1B0GV50 99 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 hCG_1809904A0A1W2PP81 198 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 A0A1W2PR64 198 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 A0A1W2PRV1 198 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 C16orf97H3BN30 126 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 RBMXL2O75526 392 aaKnown RBP6.09□□□□□ -1.43
COL17A1-204ENST00000433822 EIF3GO75821 320 aaKnown RBP eCLIP6.09□□□□□ -1.43
COL17A1-204ENST00000433822 IGHV3-43DP0DP04 118 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 IRF2P14316 349 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 DAOP14920 347 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 CDX1P47902 265 aaPredicted RBP6.09□□□□□ -1.43
COL17A1-204ENST00000433822 RPL29P47914 159 aaKnown RBP6.09□□□□□ -1.43
COL17A1-204ENST00000433822 AKR1D1P51857 326 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF137PP52743 207 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 ELLP55199 621 aaPredicted RBP6.09□□□□□ -1.43
COL17A1-204ENST00000433822 ERVFRD-1P60508 538 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 RAB31Q13636 194 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 AKIRIN2Q53H80 203 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 CT45A1Q5HYN5 189 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 BTNL3Q6UXE8 466 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 PNKDQ8N490 385 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 TPRX1Q8N7U7 411 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 ZNRF1Q8ND25 227 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 OR5B3Q8NH48 314 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 OR4A5Q8NH83 315 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 CT45A3Q8NHU0 189 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 RFESDQ8TAC1 157 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 OSR1Q8TAX0 266 aaPredicted RBP6.09□□□□□ -1.43
COL17A1-204ENST00000433822 Q8WTZ3 238 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 RHOVQ96L33 236 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 SMIM7Q9BQ49 75 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 GGTLC1Q9BX51 225 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 NGBQ9NPG2 151 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 TMEM140Q9NV12 185 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 KAAG1Q9UBP8 84 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 LY96Q9Y6Y9 160 aa6.09□□□□□ -1.43
COL17A1-204ENST00000433822 ADGRG4Q8IZF6 3080 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 TRAV9-1A0A075B6T8 112 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 A0A087X0M5 115 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 SAA2-SAA4A0A096LPE2 208 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 IGHV3-64DA0A0J9YX35 117 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 A0A1B0GX30 115 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 C17orf100A8MU93 164 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 TNFRSF13BO14836 293 aaPredicted RBP6.08□□□□□ -1.44
COL17A1-204ENST00000433822 PPP1R2P9O14990 202 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 SPRY3O43610 288 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 CLN5O75503 358 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 CXorf1O96002 111 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 MT-CO2P00403 227 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 IFNA10P01566 189 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 TYMSP04818 313 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 PFN1P07737 140 aaKnown RBP6.08□□□□□ -1.44
COL17A1-204ENST00000433822 STAG3L2P0CL84 134 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 STAG3L3P0CL85 134 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 SAA2P0DJI9 122 aaPredicted RBP6.08□□□□□ -1.44
COL17A1-204ENST00000433822 NPY1RP25929 384 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 SRP14P37108 136 aaKnown RBP6.08□□□□□ -1.44
COL17A1-204ENST00000433822 RPL35P42766 123 aaKnown RBP6.08□□□□□ -1.44
COL17A1-204ENST00000433822 RPS10P46783 165 aaKnown RBP6.08□□□□□ -1.44
COL17A1-204ENST00000433822 ZNF134P52741 427 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 EDDM3BP56851 147 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 LCN2P80188 198 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 MRPS11P82912 194 aaKnown RBP6.08□□□□□ -1.44
COL17A1-204ENST00000433822 PRCDQ00LT1 54 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 TFF3Q07654 80 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 FABP9Q0Z7S8 132 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 KIAA0141Q14154 515 aaPredicted RBP6.08□□□□□ -1.44
COL17A1-204ENST00000433822 RTL8BQ17RB0 113 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 BSXQ3C1V8 233 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 C2orf83Q53S99 150 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 OR2B11Q5JQS5 317 aa6.08□□□□□ -1.44
COL17A1-204ENST00000433822 COA6Q5JTJ3 125 aaKnown RBP6.08□□□□□ -1.44
COL17A1-204ENST00000433822 ZNF833PQ6ZTB9 187 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms