RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 BIN3Q9NQY0 253 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 PLCE1Q9P212 2302 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 GCN1Q92616 2671 aaKnown RBP10.45□□□□□ -0.74
DDX56-204ENST00000431640 HELZ2Q9BYK8 2649 aaKnown RBP10.45□□□□□ -0.74
DDX56-204ENST00000431640 TEX50A0A1B0GTY4 177 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 A0A1W2PPV4 95 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 TMEM250H0YL14 139 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 PPOXP50336 477 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 ZNF137PP52743 207 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 DLX6P56179 175 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 MEF2BQ02080 365 aaPredicted RBP10.45□□□□□ -0.74
DDX56-204ENST00000431640 FAM90A2PQ658T7 463 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 TEPPQ6URK8 271 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 PDPNQ86YL7 162 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 OR4C13Q8NGP0 309 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 CTSZQ9UBR2 303 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 ICE1Q9Y2F5 2266 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 DOCK11Q5JSL3 2073 aa10.45□□□□□ -0.74
DDX56-204ENST00000431640 H0YJW9 148 aa10.44□□□□□ -0.74
DDX56-204ENST00000431640 FCN3O75636 299 aa10.44□□□□□ -0.74
DDX56-204ENST00000431640 TSPAN9O75954 239 aa10.44□□□□□ -0.74
DDX56-204ENST00000431640 CA2P00918 260 aa10.44□□□□□ -0.74
DDX56-204ENST00000431640 USF1P22415 310 aaPredicted RBP10.44□□□□□ -0.74
DDX56-204ENST00000431640 HNF4GQ14541 408 aa10.44□□□□□ -0.74
DDX56-204ENST00000431640 Q8N7P7 452 aa10.44□□□□□ -0.74
DDX56-204ENST00000431640 MALSU1Q96EH3 234 aa10.44□□□□□ -0.74
DDX56-204ENST00000431640 TXNDC17Q9BRA2 123 aa10.44□□□□□ -0.74
DDX56-204ENST00000431640 MRPL20Q9BYC9 149 aaKnown RBP10.44□□□□□ -0.74
DDX56-204ENST00000431640 SLC25A22Q9H936 323 aa10.44□□□□□ -0.74
DDX56-204ENST00000431640 TMEM242Q9NWH2 141 aa10.44□□□□□ -0.74
DDX56-204ENST00000431640 KLF2Q9Y5W3 355 aaPredicted RBP10.44□□□□□ -0.74
DDX56-204ENST00000431640 YLPM1P49750 1951 aaKnown RBP10.44□□□□□ -0.74
DDX56-204ENST00000431640 SRRM4A7MD48 611 aaKnown RBP10.43□□□□□ -0.74
DDX56-204ENST00000431640 INS-IGF2F8WCM5 200 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 IGKV1-16P04430 117 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 IGHV1-8P0DP01 117 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 RAB5AP20339 215 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 PRRX1P54821 245 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 ERHP84090 104 aaKnown RBP10.43□□□□□ -0.74
DDX56-204ENST00000431640 C2orf83Q53S99 150 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 TMEM170AQ8WVE7 144 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 ST6GALNAC6Q969X2 333 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 HARBI1Q96MB7 349 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 NABP2Q9BQ15 211 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 HINT2Q9BX68 163 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 COMMD5Q9GZQ3 224 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 RAB1BQ9H0U4 201 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 SDF2L1Q9HCN8 221 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 LSM4Q9Y4Z0 139 aaKnown RBP10.43□□□□□ -0.74
DDX56-204ENST00000431640 CRYBG3Q68DQ2 2970 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 A0A1W2PPE2 198 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 ZNF727A8MUV8 499 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 RBP4P02753 201 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 SAA1P0DJI8 122 aaPredicted RBP10.43□□□□□ -0.74
DDX56-204ENST00000431640 RPL29P47914 159 aaKnown RBP10.43□□□□□ -0.74
DDX56-204ENST00000431640 ERVFRD-1P60508 538 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 TGIF2LXQ8IUE1 241 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 FAM24BQ8N5W8 94 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 OR1L8Q8NGR8 309 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 NANPQ8TBE9 248 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 TMEM167AQ8TBQ9 72 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 MGST2Q99735 147 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 CTDSP1Q9GZU7 261 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 TMEM133Q9H2Q1 129 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 NAT8Q9UHE5 227 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 WASHC3Q9Y3C0 194 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 PXMP4Q9Y6I8 212 aa10.43□□□□□ -0.74
DDX56-204ENST00000431640 A0A1W2PN81 502 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 hCG_1809904A0A1W2PP81 198 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 A0A1W2PR64 198 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 A0A1W2PRV1 198 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 COL8A2P25067 703 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 COL8A1P27658 744 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 CHRNA7P36544 502 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 LGALS7P47929 136 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 CD81P60033 236 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 RPL8P62917 257 aaKnown RBP10.42□□□□□ -0.74
DDX56-204ENST00000431640 TMEM241Q24JQ0 296 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 WDR25Q64LD2 544 aaPredicted RBP10.42□□□□□ -0.74
DDX56-204ENST00000431640 ISOC2Q96AB3 205 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 GGTLC1Q9BX51 225 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 TMPRSS5Q9H3S3 457 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 MIOXQ9UGB7 285 aa10.42□□□□□ -0.74
DDX56-204ENST00000431640 USP9YO00507 2555 aaPredicted RBP10.42□□□□□ -0.74
DDX56-204ENST00000431640 SPTAN1Q13813 2472 aaKnown RBP10.41□□□□□ -0.74
DDX56-204ENST00000431640 A6NNC1 897 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 CXorf1O96002 111 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 IGHV2-70P01814 119 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 BSXQ3C1V8 233 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 VMA21Q3ZAQ7 101 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 ARSJQ5FYB0 599 aaPredicted RBP10.41□□□□□ -0.74
DDX56-204ENST00000431640 TMEM144Q7Z5S9 345 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 C1QL4Q86Z23 238 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 OR4F5Q8NH21 305 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 CACNG8Q8WXS5 425 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 YPEL4Q96NS1 127 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 OR4F4Q96R69 305 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 SAV1Q9H4B6 383 aaPredicted RBP10.41□□□□□ -0.74
DDX56-204ENST00000431640 NDUFA4L2Q9NRX3 87 aa10.41□□□□□ -0.74
DDX56-204ENST00000431640 ZNRD1Q9P1U0 126 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms