RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 NOL4LQ96MY1 436 aaPredicted RBP11.25□□□□□ -0.61
LAMA4-208ENST00000431543 CITED2Q99967 270 aaPredicted RBP11.25□□□□□ -0.61
LAMA4-208ENST00000431543 NMES1Q9C002 83 aa11.25□□□□□ -0.61
LAMA4-208ENST00000431543 ZNF430Q9H8G1 570 aaPredicted RBP11.25□□□□□ -0.61
LAMA4-208ENST00000431543 LINC00527Q9UJ94 153 aa11.25□□□□□ -0.61
LAMA4-208ENST00000431543 FOXA2Q9Y261 457 aaPredicted RBP11.25□□□□□ -0.61
LAMA4-208ENST00000431543 ZNF257Q9Y2Q1 563 aa11.25□□□□□ -0.61
LAMA4-208ENST00000431543 NSG2Q9Y328 171 aa11.25□□□□□ -0.61
LAMA4-208ENST00000431543 A0A1B0GVG6 124 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 ADARB2-AS1A8MUL3 147 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 ST8SIA3O43173 380 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 LY86O95711 162 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 GIPP09681 153 aaPredicted RBP11.24□□□□□ -0.61
LAMA4-208ENST00000431543 NKX2-1P43699 371 aaPredicted RBP11.24□□□□□ -0.61
LAMA4-208ENST00000431543 SPCS3P61009 180 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 HSPE1P61604 102 aaKnown RBP11.24□□□□□ -0.61
LAMA4-208ENST00000431543 C2orf68Q2NKX9 166 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 NSUN5P1Q3KNT7 163 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 Q6ZRM9 215 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 OR11H7Q8NGC8 314 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 OR1L8Q8NGR8 309 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 CHAC2Q8WUX2 184 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 TMEM14BQ9NUH8 114 aa11.24□□□□□ -0.61
LAMA4-208ENST00000431543 MEGF8Q7Z7M0 2845 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 TRAV3A0A0B4J244 114 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 A0A0G2JRQ6 117 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 A0A1W2PN81 502 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 KCNAB3O43448 404 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 CCNKO75909 580 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 SCGB1D2O95969 90 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 CA2P00918 260 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 PET100P0DJ07 73 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 CXCL3P19876 107 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 PVALBP20472 110 aaPredicted RBP11.23□□□□□ -0.61
LAMA4-208ENST00000431543 CHRNA7P36544 502 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 OR2B8PP59922 312 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 RAP2BP61225 183 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 FXYD3Q14802 87 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 IZUMO4Q1ZYL8 232 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 HSD17B13Q7Z5P4 300 aaPredicted RBP11.23□□□□□ -0.61
LAMA4-208ENST00000431543 ZNF329Q86UD4 541 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 AKAP14Q86UN6 197 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 ABHD5Q8WTS1 349 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 FYTTD1Q96QD9 318 aaKnown RBP11.23□□□□□ -0.61
LAMA4-208ENST00000431543 HINT2Q9BX68 163 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 QTRT1Q9BXR0 403 aaKnown RBP11.23□□□□□ -0.61
LAMA4-208ENST00000431543 HIPK2Q9H2X6 1198 aa11.23□□□□□ -0.61
LAMA4-208ENST00000431543 TEX50A0A1B0GTY4 177 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 CEBPZOSA8MTT3 80 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 MPTX1A8MV57 137 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 FCN1O00602 326 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 PFDN1O60925 122 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 PITX3O75364 302 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 IGHG2P01859 326 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 RPL27AP46776 148 aaKnown RBP11.22□□□□□ -0.61
LAMA4-208ENST00000431543 H2BFSP57053 126 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 RPP30P78346 268 aaKnown RBP11.22□□□□□ -0.61
LAMA4-208ENST00000431543 CX3CL1P78423 397 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 ERHP84090 104 aaKnown RBP11.22□□□□□ -0.61
LAMA4-208ENST00000431543 CD83Q01151 205 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 ID3Q02535 119 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 TMEM267Q0VDI3 215 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-208ENST00000431543 PJVKQ0ZLH3 352 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 OR4D5Q8NGN0 318 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 CIB3Q96Q77 187 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-208ENST00000431543 HSPB9Q9BQS6 159 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 PLEKHA3Q9HB20 300 aa11.22□□□□□ -0.61
LAMA4-208ENST00000431543 A0A1W2PRX2 142 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 L7N2F9 121 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 OPN1MWP04001 364 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 OPN1MW2P0DN77 364 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 OPN1MW3P0DN78 364 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 PSMB6P28072 239 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 S100A10P60903 97 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 VAMP2P63027 116 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 TNFRSF9Q07011 255 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 AARDQ4LEZ3 155 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 CXorf66Q5JRM2 361 aaPredicted RBP11.21□□□□□ -0.61
LAMA4-208ENST00000431543 SLC35E3Q7Z769 313 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 THAP6Q8TBB0 222 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 ARPC1AQ92747 370 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 TMEM68Q96MH6 324 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 SRSF8Q9BRL6 282 aaKnown RBP11.21□□□□□ -0.61
LAMA4-208ENST00000431543 TPSG1Q9NRR2 321 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 HSPB7Q9UBY9 170 aa11.21□□□□□ -0.61
LAMA4-208ENST00000431543 PSMB11A5LHX3 300 aa11.2□□□□□ -0.62
LAMA4-208ENST00000431543 MSGN1A6NI15 193 aa11.2□□□□□ -0.62
LAMA4-208ENST00000431543 SYNGR2O43760 224 aa11.2□□□□□ -0.62
LAMA4-208ENST00000431543 HOXA1P49639 335 aaPredicted RBP11.2□□□□□ -0.62
LAMA4-208ENST00000431543 SUB1P53999 127 aaKnown RBP eCLIP11.2□□□□□ -0.62
LAMA4-208ENST00000431543 PRCDQ00LT1 54 aa11.2□□□□□ -0.62
LAMA4-208ENST00000431543 PDLIM3Q53GG5 364 aaPredicted RBP11.2□□□□□ -0.62
LAMA4-208ENST00000431543 GRPEL2Q8TAA5 225 aa11.2□□□□□ -0.62
LAMA4-208ENST00000431543 PPP1R1CQ8WVI7 109 aa11.2□□□□□ -0.62
LAMA4-208ENST00000431543 SRSF12Q8WXF0 261 aaKnown RBP11.2□□□□□ -0.62
LAMA4-208ENST00000431543 RAB40CQ96S21 281 aa11.2□□□□□ -0.62
LAMA4-208ENST00000431543 GON7Q9BXV9 100 aa11.2□□□□□ -0.62
LAMA4-208ENST00000431543 HEYLQ9NQ87 328 aaPredicted RBP11.2□□□□□ -0.62
LAMA4-208ENST00000431543 NDUFA4L2Q9NRX3 87 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms