RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 IGKV1-16P04430 117 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 TYMSP04818 313 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 IL6RP08887 468 aaPredicted RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 SAA2P0DJI9 122 aaPredicted RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 GPR12P47775 334 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 GNG10P50151 68 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 ZNF83P51522 516 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 CNN1P51911 297 aaKnown RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 CASP6P55212 293 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 DLX1P56177 255 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 PAX5Q02548 391 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 FXYD3Q14802 87 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 MSMO1Q15800 293 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 C17orf58Q2M2W7 97 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 KIAA1644Q3SXP7 199 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 CT45A1Q5HYN5 189 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 C19orf35Q6ZS72 473 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 MRPL41Q8IXM3 137 aaKnown RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 NHLRC2Q8NBF2 726 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 DEFB108BQ8NET1 73 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 CT45A3Q8NHU0 189 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 NANOS1Q8WY41 292 aaKnown RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 DDB2Q92466 427 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 SFRP2Q96HF1 295 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 HINT2Q9BX68 163 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 HEYLQ9NQ87 328 aaPredicted RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 TP73-AS1Q9UF72 201 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 TCF19Q9Y242 345 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 PPIAL4AQ9Y536 164 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 RNF212BA8MTL3 300 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 C21orf140B9A014 251 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 TSTD3H0UI37 97 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 STAG3L2P0CL84 134 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 STAG3L3P0CL85 134 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 G0S2P27469 103 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 COMPP49747 757 aaPredicted RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 TCL1AP56279 114 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 RAB4BP61018 213 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 RPL31P62899 125 aaKnown RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 CATR1Q13166 79 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 DIAPH2-AS1Q14236 149 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 EFNB3Q15768 340 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 DOLPP1Q86YN1 238 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 STPG3Q8N7X2 389 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 OR10W1Q8NGF6 305 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 SNIP1Q8TAD8 396 aaKnown RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 LINC00479Q96M42 142 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 RCHY1Q96PM5 261 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 RNASE7Q9H1E1 156 aaKnown RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 CXXC4Q9H2H0 198 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 ABI3Q9P2A4 366 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 LSM4Q9Y4Z0 139 aaKnown RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 TRAPPC1Q9Y5R8 145 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 HRNRQ86YZ3 2850 aaPredicted RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 ZNF462Q96JM2 2506 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 J3QKU1 62 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 K7EM74 188 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 TMPRSS2O15393 492 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 SPRY3O43610 288 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 YPEL1O60688 119 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 SERF1AO75920 110 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 ABCA1O95477 2261 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 CA2P00918 260 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 OR10J4P0C629 311 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 LINC00869P0C866 280 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 TAS2R60P59551 318 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 USF2Q15853 346 aaPredicted RBP5.87□□□□□ -1.47
COL28A1-202ENST00000430711 OR4A47Q6IF82 309 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 FAM216BQ8N7L0 139 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 ZNF709Q8N972 641 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 ST6GALNAC3Q8NDV1 305 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 RND1Q92730 232 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 YPEL2Q96QA6 119 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 OR2V2Q96R30 315 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 ZPBPQ9BS86 351 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 NDUFAF3Q9BU61 184 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 ZFAND3Q9H8U3 227 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 DYSFO75923 2080 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 TRAV5A0A0B4J249 113 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 TMEM210A6NLX4 147 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 SCGB1D1O95968 90 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 GCHFRP30047 84 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 SPCS3P61009 180 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 ATP6V1FQ16864 119 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 ACOT6Q3I5F7 207 aaPredicted RBP5.87□□□□□ -1.47
COL28A1-202ENST00000430711 OR4P4Q8NGL7 312 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 OR9G1Q8NH87 305 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 ITLN1Q8WWA0 313 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 FAM168AQ92567 244 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 STARD4Q96DR4 205 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 HSD17B10Q99714 261 aaKnown RBP5.87□□□□□ -1.47
COL28A1-202ENST00000430711 IDI2-AS1Q9NZ38 188 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 MSRB2Q9Y3D2 182 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 COL12A1Q99715 3063 aa5.87□□□□□ -1.47
COL28A1-202ENST00000430711 SPAARA0A1B0GVQ0 90 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 A0A1W2PPV4 95 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 SRRM5B3KS81 715 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 GGTLC3B5MD39 225 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 F6UZH7 168 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 IGLV1-44P01699 117 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms