RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 MANBALQ9NQG1 85 aa10.77□□□□□ -0.69
PTCH1-207ENST00000429896 HERPUD1Q15011 391 aa10.77□□□□□ -0.69
PTCH1-207ENST00000429896 ELOBQ15370 118 aa10.77□□□□□ -0.69
PTCH1-207ENST00000429896 RPL39P5Q59GN2 51 aa10.77□□□□□ -0.69
PTCH1-207ENST00000429896 PACRGQ96M98 296 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-207ENST00000429896 MLNRO43193 412 aa10.77□□□□□ -0.69
PTCH1-207ENST00000429896 TMEM155Q4W5P6 130 aa10.77□□□□□ -0.69
PTCH1-207ENST00000429896 PAXXQ9BUH6 204 aa10.77□□□□□ -0.69
PTCH1-207ENST00000429896 ZNF503-AS2A6NEH8 195 aa10.77□□□□□ -0.69
PTCH1-207ENST00000429896 SELENOKQ9Y6D0 94 aa10.77□□□□□ -0.69
PTCH1-207ENST00000429896 FOXC2Q99958 501 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 BET1LQ9NYM9 111 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 TRAV24A0A0B4J272 114 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 TRAV40A0A0B4J280 105 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 VSIG10L2P0DP72 767 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 RUNX1Q01196 453 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 ATP6V1FQ16864 119 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 ZNF497Q6ZNH5 498 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 SPOCK3Q9BQ16 436 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 BEX4Q9NWD9 120 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-207ENST00000429896 IGKV1D-33P01593 117 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 IGKV1-33P01594 117 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 PRB4P10163 310 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-207ENST00000429896 SCGB1A1P11684 91 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 EGR1P18146 543 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 EMP1P54849 157 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 TMEM42Q69YG0 159 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 PGLYRP4Q96LB8 373 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 DEDDO75618 318 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 OR2A4O95047 310 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 FCGR2BP31994 310 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-207ENST00000429896 OR2A7Q96R45 310 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 CBY1Q9Y3M2 126 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 CORTO00230 105 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 OR10J6PQ8NGY7 276 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 NEU1Q99519 415 aa10.76□□□□□ -0.69
PTCH1-207ENST00000429896 HIST1H1BP16401 226 aaKnown RBP10.75□□□□□ -0.69
PTCH1-207ENST00000429896 GCSAMLQ5JQS6 135 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 VMO1Q7Z5L0 202 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 RHOVQ96L33 236 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 IGKV1-27A0A075B6S5 117 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 CDS2O95674 445 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 PF4P02776 101 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 TEPPQ6URK8 271 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 TMEM222Q9H0R3 208 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 P2RY1P47900 373 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 KIF26BQ2KJY2 2108 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 WDR73Q6P4I2 378 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 SLC35E3Q7Z769 313 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 ZNF843Q8N446 348 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 DRAM1Q8N682 238 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 COLCA1Q6ZS62 124 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 RAB37Q96AX2 223 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 HTN3P15516 51 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 ZNF345Q14585 488 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 ZNF818PQ6ZRF7 136 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 FBLN5Q9UBX5 448 aa10.75□□□□□ -0.69
PTCH1-207ENST00000429896 TMEM189A5PLL7 270 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 ZNF735P0CB33 412 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 FXYD3Q14802 87 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 ZNF146Q15072 292 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 FAM53AQ6NSI3 398 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-207ENST00000429896 CD177Q8N6Q3 437 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 IGKV1-12A0A0C4DH73 117 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 C1QL1O75973 258 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 MOSP00540 346 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 IGKV1D-12P01611 117 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 GAFA1Q96PS6 74 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 GPR132Q9UNW8 380 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 F11RQ9Y624 299 aaKnown RBP10.74□□□□□ -0.69
PTCH1-207ENST00000429896 CXorf66Q5JRM2 361 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-207ENST00000429896 ZNF383Q8NA42 475 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 SLC25A28Q96A46 364 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 DNM1P46Q6ZS02 220 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 H1FOOQ8IZA3 346 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-207ENST00000429896 PSMB11A5LHX3 300 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 IFITM10A6NMD0 228 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 SHISA9B4DS77 424 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 CXorf1O96002 111 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 CD74P04233 296 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 CXCL2P19875 107 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 UCP3P55916 312 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 OR4A5Q8NH83 315 aa10.74□□□□□ -0.69
PTCH1-207ENST00000429896 LOC107984156A0A0G2JMH3 177 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 SEM1Q6ZVN7 128 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 ARL17AQ8IVW1 177 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 DNLZQ5SXM8 178 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 TMEM191AQ9H0A3 160 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 TMEM200BQ69YZ2 307 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 MRPL20Q9BYC9 149 aaKnown RBP10.73□□□□□ -0.69
PTCH1-207ENST00000429896 NPFFR1Q9GZQ6 430 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 IGHV3OR16-8A0A075B7F1 116 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 NUDT3O95989 172 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 MAS1LP35410 378 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 RELBQ01201 579 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 IZUMO4Q1ZYL8 232 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 OR5AU1Q8NGC0 362 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 Q8TCH9 128 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 MUC21A0A0G2JKD1 596 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 MUC21A0A140T8X8 626 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms