RNA–Protein interactions for RNA: ENST00000429829.5

XIST-204, X inactive specific transcript, humanhuman

TSL 1 (best) BASIC

Gene XIST, Length 19,275 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-204ENST00000429829 CLDN2P57739 230 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 ID3Q02535 119 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 CKS2P33552 79 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 HHEXQ03014 270 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 FAM214BQ7L5A3 538 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 C15orf53Q8NAA6 179 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 NUP35Q8NFH5 326 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 C10orf35Q96D05 121 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 LOC285556D6RIA3 1793 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.1□□□□□ -1.75
XIST-204ENST00000429829 R3HDMLQ9H3Y0 253 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 C21orf140B9A014 251 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 CCL11P51671 97 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 KIR3DL3Q8N743 410 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 IL23AQ9NPF7 189 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 WNT2P09544 360 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 ZNF542PQ5EBM4 170 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 KISS1RQ969F8 398 aaPredicted RBP4.1□□□□□ -1.75
XIST-204ENST00000429829 C9JCJ5 164 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 TMEM258P61165 79 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 SRSF1Q07955 248 aaKnown RBP eCLIP4.1□□□□□ -1.752e-7■■■□□ 17.5
XIST-204ENST00000429829 THAP10Q9P2Z0 257 aaPredicted RBP4.1□□□□□ -1.75
XIST-204ENST00000429829 CUL9Q8IWT3 2517 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 H7C2G1 150 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 RRN3P1Q2M238 152 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 C18orf12Q96KH6 178 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 DENND4AQ7Z401 1863 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 DNAJC25-GNG10A0A024R161 153 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 ARL14EPLP0DKL9 152 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 IGFBP7Q16270 282 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 KIAA1217Q5T5P2 1943 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 BAZ2AQ9UIF9 1905 aaKnown RBP4.1□□□□□ -1.75
XIST-204ENST00000429829 FANCMQ8IYD8 2048 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 A0A1W2PRU2 124 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 SYNGR3O43761 229 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 ZGLP1P0C6A0 271 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 FOXA3P55318 350 aaPredicted RBP4.1□□□□□ -1.75
XIST-204ENST00000429829 SPATA31B1PQ5VZV4 182 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 PGLYRP4Q96LB8 373 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 CRIM1Q9NZV1 1036 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 RPL15P61313 204 aaKnown RBP4.1□□□□□ -1.75
XIST-204ENST00000429829 TEPPQ6URK8 271 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 DNAJB12Q9NXW2 375 aaKnown RBP4.1□□□□□ -1.75
XIST-204ENST00000429829 SPINT2O43291 252 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 MRPL23Q16540 153 aaKnown RBP4.1□□□□□ -1.75
XIST-204ENST00000429829 NMSQ5H8A3 153 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 CT83Q5H943 113 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 ZNF658BQ4V348 819 aaPredicted RBP4.1□□□□□ -1.75
XIST-204ENST00000429829 DMRTC1Q5HYR2 192 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 EPDR1Q9UM22 224 aa4.1□□□□□ -1.75
XIST-204ENST00000429829 COL1A1P02452 1464 aaPredicted RBP4.1□□□□□ -1.75
XIST-204ENST00000429829 GATA2P23769 480 aaPredicted RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 PSG4Q00888 419 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 Q6AWC8 147 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 ADGRB1O14514 1584 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 ERCC6L2Q5T890 1561 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 MROH1Q8NDA8 1641 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 LOC389332A0A1B0GUA5 103 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 MOB4Q9Y3A3 225 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 TRIP12Q14669 1992 aaPredicted RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 N4BP2Q86UW6 1770 aaPredicted RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 TMEM230Q96A57 120 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 F5H697 171 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 C2orf82Q6UX34 121 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 C3orf22Q8N5N4 141 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 GATD1Q8NB37 220 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 COL5A2P05997 1499 aaPredicted RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 HSPB6O14558 160 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 APOHP02749 345 aaPredicted RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 SUPT4H1P63272 117 aaKnown RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 CIARTQ8N365 385 aaPredicted RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 LRRK1Q38SD2 2015 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 MRPL33O75394 65 aaKnown RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 PLAUP00749 431 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 ACYP1P07311 99 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 PTGDSP41222 190 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 EGR4Q05215 589 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 PRR30Q53SZ7 412 aaPredicted RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 TMEM42Q69YG0 159 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 HIGD1CA8MV81 97 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 M0QZQ0 153 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 SRSF2Q01130 221 aaKnown RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 ZDHHC23Q8IYP9 409 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 MTCL1Q9Y4B5 1905 aaKnown RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 EPPINO95925 133 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 EGR1P18146 543 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 FLYWCH2Q96CP2 140 aaKnown RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 CFHR5Q9BXR6 569 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 TRGV8A0A0C4DH27 118 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 TRBV5-4A0A0C4DH59 114 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 A0A1W2PPC4 97 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 CEACAM18A8MTB9 384 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 KLKB1P03952 638 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 CLDN17P56750 224 aa4.09□□□□□ -1.75
XIST-204ENST00000429829 RPS28P62857 69 aaKnown RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 C11orf68Q9H3H3 251 aaKnown RBP4.09□□□□□ -1.75
XIST-204ENST00000429829 A0A1B0GUT8 65 aa4.09□□□□□ -1.76
XIST-204ENST00000429829 ZNF740Q8NDX6 193 aa4.09□□□□□ -1.76
XIST-204ENST00000429829 NPC2P61916 151 aa4.09□□□□□ -1.76
XIST-204ENST00000429829 AMTNQ6UX39 209 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms