RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MS4A5Q9H3V2 200 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 PLSCR4Q9NRQ2 329 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 LSM4Q9Y4Z0 139 aaKnown RBP13.32□□□□□ -0.28
C9orf3-206ENST00000428313 IGHV3-15A0A0B4J1V0 119 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 A0A0G2JLM5 398 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 PRSS46E5RG02 174 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 H3BUT2 72 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 M0R296 226 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 RBMXL2O75526 392 aaKnown RBP13.32□□□□□ -0.28
C9orf3-206ENST00000428313 SPATA31B1PQ5VZV4 182 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 TMEM251Q8N6I4 163 aa13.32□□□□□ -0.28
C9orf3-206ENST00000428313 F2RL2O00254 374 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 P04436 131 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 MGST1P10620 155 aaKnown RBP13.31□□□□□ -0.28
C9orf3-206ENST00000428313 NTF4P34130 210 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 SMAGPQ0VAQ4 97 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 TMEM240Q5SV17 173 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 COLCA1Q6ZS62 124 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 OR1L3Q8NH93 324 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 GRAMD2BQ96HH9 432 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 TAAR6Q96RI8 345 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 UCN2Q96RP3 112 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 MAP1LC3CQ9BXW4 147 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 GTSF1LQ9H1H1 148 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 KIAA1549Q9HCM3 1950 aa13.31□□□□□ -0.28
C9orf3-206ENST00000428313 SYNGR1O43759 233 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 FOXH1O75593 365 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 PATE4P0C8F1 98 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 RPL30P62888 115 aaKnown RBP13.3□□□□□ -0.28
C9orf3-206ENST00000428313 SPINK9Q5DT21 86 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 ZNF497Q6ZNH5 498 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 OR4A5Q8NH83 315 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 SH2D2AQ9NP31 389 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 A0A1B0GX78 115 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 C22orf46C9J442 243 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 APOA2P02652 100 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 LIPFP07098 398 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 B4GALT1P15291 398 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 RAB9AP51151 201 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 TCTEX1D4Q5JR98 221 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 ANKRD37Q7Z713 158 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 NUP35Q8NFH5 326 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 DPF1Q92782 380 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 FER1L5A0AVI2 2057 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 ZNF407Q9C0G0 2248 aa13.3□□□□□ -0.28
C9orf3-206ENST00000428313 CD300EQ496F6 205 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-206ENST00000428313 LINC00173Q6ZV60 143 aa13.29□□□□□ -0.28
C9orf3-206ENST00000428313 NHLRC2Q8NBF2 726 aa13.29□□□□□ -0.28
C9orf3-206ENST00000428313 TRAPPC2LQ9UL33 140 aa13.29□□□□□ -0.28
C9orf3-206ENST00000428313 SPCS1Q9Y6A9 102 aa13.29□□□□□ -0.28
C9orf3-206ENST00000428313 A0A1W2PPM0 123 aa13.29□□□□□ -0.28
C9orf3-206ENST00000428313 SH2D7A6NKC9 451 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-206ENST00000428313 FTH1P19P0C7X4 201 aa13.29□□□□□ -0.28
C9orf3-206ENST00000428313 BRWD1-AS2P59051 145 aa13.29□□□□□ -0.28
C9orf3-206ENST00000428313 WIPI1Q5MNZ9 446 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-206ENST00000428313 LINC01545Q5VT33 79 aa13.29□□□□□ -0.28
C9orf3-206ENST00000428313 STPG3Q8N7X2 389 aa13.29□□□□□ -0.28
C9orf3-206ENST00000428313 MBNL3Q9NUK0 354 aaKnown RBP13.29□□□□□ -0.28
C9orf3-206ENST00000428313 C17orf98A8MV24 154 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 MC5RP33032 325 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 CKS1BP61024 79 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 TFF2Q03403 129 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 RTL8BQ17RB0 113 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 Q6P435 159 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 SLC23A3Q6PIS1 610 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 C5orf30Q96GV9 206 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 USP34Q70CQ2 3546 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 A0A1B0GXF2 115 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 FAM90A9PA6NNJ1 464 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 CA1P00915 261 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-206ENST00000428313 FOXL2P58012 376 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 FA2HQ7L5A8 372 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 SSMEM1Q8WWF3 244 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 FAM168AQ92567 244 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 FOXB1Q99853 325 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 PHF7Q9BWX1 381 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-206ENST00000428313 HSPB8Q9UJY1 196 aa13.28□□□□□ -0.28
C9orf3-206ENST00000428313 MRPS21P82921 87 aaKnown RBP13.27□□□□□ -0.28
C9orf3-206ENST00000428313 KIR3DS1Q14943 382 aa13.27□□□□□ -0.28
C9orf3-206ENST00000428313 TPRX1Q8N7U7 411 aa13.27□□□□□ -0.28
C9orf3-206ENST00000428313 OR52E5Q8NH55 327 aa13.27□□□□□ -0.28
C9orf3-206ENST00000428313 FGFBP3Q8TAT2 258 aa13.27□□□□□ -0.28
C9orf3-206ENST00000428313 FAM216AQ8WUB2 273 aa13.27□□□□□ -0.28
C9orf3-206ENST00000428313 C1orf159Q96HA4 380 aa13.27□□□□□ -0.28
C9orf3-206ENST00000428313 THYN1Q9P016 225 aa13.27□□□□□ -0.28
C9orf3-206ENST00000428313 GAGE12HA6NDE8 117 aa13.27□□□□□ -0.29
C9orf3-206ENST00000428313 UQCRFS1P47985 274 aa13.27□□□□□ -0.29
C9orf3-206ENST00000428313 PSG5Q15238 335 aa13.27□□□□□ -0.29
C9orf3-206ENST00000428313 FAM214BQ7L5A3 538 aa13.27□□□□□ -0.29
C9orf3-206ENST00000428313 SPATA25Q9BR10 227 aa13.27□□□□□ -0.29
C9orf3-206ENST00000428313 MED12Q93074 2177 aa13.26□□□□□ -0.29
C9orf3-206ENST00000428313 TEX48A0A1B0GUV7 120 aa13.26□□□□□ -0.29
C9orf3-206ENST00000428313 A0A1W2PRE2 83 aa13.26□□□□□ -0.29
C9orf3-206ENST00000428313 OR9G9P0C7N8 305 aa13.26□□□□□ -0.29
C9orf3-206ENST00000428313 ARL4DP49703 201 aa13.26□□□□□ -0.29
C9orf3-206ENST00000428313 TEPPQ6URK8 271 aa13.26□□□□□ -0.29
C9orf3-206ENST00000428313 ZNF488Q96MN9 340 aa13.26□□□□□ -0.29
C9orf3-206ENST00000428313 SSBP3Q9BWW4 388 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-206ENST00000428313 DUSP13Q9UII6 198 aa13.26□□□□□ -0.29
C9orf3-206ENST00000428313 DIDO1Q9BTC0 2240 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms