RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 C2CD4CQ8TF44 421 aa12.47□□□□□ -0.41
PSMD4-203ENST00000427779 SECTM1Q8WVN6 248 aa12.47□□□□□ -0.41
PSMD4-203ENST00000427779 GPHA2Q96T91 129 aa12.47□□□□□ -0.41
PSMD4-203ENST00000427779 QTRT1Q9BXR0 403 aaKnown RBP12.47□□□□□ -0.41
PSMD4-203ENST00000427779 DNAH6Q9C0G6 4158 aa12.47□□□□□ -0.41
PSMD4-203ENST00000427779 VPS13DQ5THJ4 4388 aa12.47□□□□□ -0.41
PSMD4-203ENST00000427779 TMEM235A6NFC5 223 aa12.46□□□□□ -0.41
PSMD4-203ENST00000427779 UPK2O00526 184 aa12.46□□□□□ -0.41
PSMD4-203ENST00000427779 HPRT1P00492 218 aa12.46□□□□□ -0.41
PSMD4-203ENST00000427779 CTSDP07339 412 aaPredicted RBP12.46□□□□□ -0.41
PSMD4-203ENST00000427779 ARPC4P59998 168 aa12.46□□□□□ -0.41
PSMD4-203ENST00000427779 POU2AF1Q16633 256 aa12.46□□□□□ -0.41
PSMD4-203ENST00000427779 CCL28Q9NRJ3 127 aa12.46□□□□□ -0.41
PSMD4-203ENST00000427779 SLC25A24Q6NUK1 477 aa12.45□□□□□ -0.42
PSMD4-203ENST00000427779 APRG1Q8IVJ8 170 aa12.45□□□□□ -0.42
PSMD4-203ENST00000427779 DMBX1Q8NFW5 382 aa12.45□□□□□ -0.42
PSMD4-203ENST00000427779 OR13F1Q8NGS4 319 aa12.45□□□□□ -0.42
PSMD4-203ENST00000427779 OR11H2Q8NH07 326 aa12.45□□□□□ -0.42
PSMD4-203ENST00000427779 TMEM140Q9NV12 185 aa12.45□□□□□ -0.42
PSMD4-203ENST00000427779 C21orf62Q9NYP8 219 aa12.45□□□□□ -0.42
PSMD4-203ENST00000427779 TRAV3A0A0B4J244 114 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 TRDV1A0A1B0GX56 115 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 C15orf62A8K5M9 175 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 SERPINE2P07093 398 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 TRAPPC2P0DI81 140 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 TRAPPC2BP0DI82 140 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 OR13C7P0DN81 318 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 FCGR2CP31995 323 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 ADMP35318 185 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 PRR20EP86478 221 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 PRR20CP86479 221 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 PRR20DP86480 221 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 PRR20BP86481 221 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 PRR20AP86496 221 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 TBCEQ15813 527 aaPredicted RBP12.44□□□□□ -0.42
PSMD4-203ENST00000427779 ZNF367Q7RTV3 350 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 OR10W1Q8NGF6 305 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 NDUFB11Q9NX14 153 aa12.44□□□□□ -0.42
PSMD4-203ENST00000427779 SULT1C2O00338 296 aa12.43□□□□□ -0.42
PSMD4-203ENST00000427779 ZNF207O43670 478 aaKnown RBP12.43□□□□□ -0.42
PSMD4-203ENST00000427779 SSX5O60225 188 aa12.43□□□□□ -0.42
PSMD4-203ENST00000427779 MRPS14O60783 128 aaKnown RBP12.43□□□□□ -0.42
PSMD4-203ENST00000427779 UBAC2Q8NBM4 344 aa12.43□□□□□ -0.42
PSMD4-203ENST00000427779 BEST4Q8NFU0 473 aa12.43□□□□□ -0.42
PSMD4-203ENST00000427779 SCARB1Q8WTV0 552 aa12.43□□□□□ -0.42
PSMD4-203ENST00000427779 CHRDL1Q9BU40 450 aa12.43□□□□□ -0.42
PSMD4-203ENST00000427779 PLEKHA2Q9HB19 425 aa12.43□□□□□ -0.42
PSMD4-203ENST00000427779 IGHV3OR16-8A0A075B7F1 116 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 PPYP01298 95 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 ERVK-16P61578 105 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 WT1-ASQ06250 92 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 Q56UQ5 140 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 NR2C2APQ86WQ0 139 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 OR1L8Q8NGR8 309 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 LSM10Q969L4 123 aaKnown RBP12.42□□□□□ -0.42
PSMD4-203ENST00000427779 CMTM3Q96MX0 182 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 RNF2Q99496 336 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 SLC5A7Q9GZV3 580 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 COMMD9Q9P000 198 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 SMPXQ9UHP9 88 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 ETV7Q9Y603 341 aa12.42□□□□□ -0.42
PSMD4-203ENST00000427779 F11RQ9Y624 299 aaKnown RBP12.42□□□□□ -0.42
PSMD4-203ENST00000427779 IGHV3-21A0A0B4J1V1 117 aa12.41□□□□□ -0.42
PSMD4-203ENST00000427779 NOTOA8MTQ0 251 aa12.41□□□□□ -0.42
PSMD4-203ENST00000427779 C11orf94C9JXX5 98 aa12.41□□□□□ -0.42
PSMD4-203ENST00000427779 TFPI2P48307 235 aa12.41□□□□□ -0.42
PSMD4-203ENST00000427779 RELQ04864 619 aaPredicted RBP12.41□□□□□ -0.42
PSMD4-203ENST00000427779 ZNF124Q15973 351 aa12.41□□□□□ -0.42
PSMD4-203ENST00000427779 C22orf42Q6IC83 251 aa12.41□□□□□ -0.42
PSMD4-203ENST00000427779 TMEM116Q8NCL8 245 aa12.41□□□□□ -0.42
PSMD4-203ENST00000427779 OR51H1Q8NH63 302 aa12.41□□□□□ -0.42
PSMD4-203ENST00000427779 BORCS5Q969J3 196 aa12.41□□□□□ -0.42
PSMD4-203ENST00000427779 RHPN1-AS1Q9BWJ2 59 aa12.41□□□□□ -0.42
PSMD4-203ENST00000427779 RYR1P21817 5038 aa12.4□□□□□ -0.42
PSMD4-203ENST00000427779 IGHV7-4-1A0A0J9YVY3 117 aa12.4□□□□□ -0.42
PSMD4-203ENST00000427779 TEX50A0A1B0GTY4 177 aa12.4□□□□□ -0.42
PSMD4-203ENST00000427779 SMIM30A4D0T7 59 aa12.4□□□□□ -0.42
PSMD4-203ENST00000427779 F8W735 103 aaPredicted RBP12.4□□□□□ -0.42
PSMD4-203ENST00000427779 CHEK1O14757 476 aa12.4□□□□□ -0.42
PSMD4-203ENST00000427779 CA1P00915 261 aaPredicted RBP12.4□□□□□ -0.42
PSMD4-203ENST00000427779 MFAP2P55001 183 aa12.4□□□□□ -0.42
PSMD4-203ENST00000427779 AQP4P55087 323 aa12.4□□□□□ -0.42
PSMD4-203ENST00000427779 PAFAH1B2P68402 229 aa12.4□□□□□ -0.42
PSMD4-203ENST00000427779 TMEM187Q14656 261 aa12.4□□□□□ -0.42
PSMD4-203ENST00000427779 AADACL3Q5VUY0 350 aa12.4□□□□□ -0.42
PSMD4-203ENST00000427779 LINC00336Q6ZUF6 198 aa12.4□□□□□ -0.42
PSMD4-203ENST00000427779 HINT2Q9BX68 163 aa12.4□□□□□ -0.42
PSMD4-203ENST00000427779 MARCH11A6NNE9 402 aa12.39□□□□□ -0.43
PSMD4-203ENST00000427779 IGLL5B9A064 214 aa12.39□□□□□ -0.43
PSMD4-203ENST00000427779 K7EIM0 57 aa12.39□□□□□ -0.43
PSMD4-203ENST00000427779 NUPL2O15504 423 aaKnown RBP12.39□□□□□ -0.43
PSMD4-203ENST00000427779 FXYD4P59646 89 aa12.39□□□□□ -0.43
PSMD4-203ENST00000427779 ZNF773Q6PK81 442 aa12.39□□□□□ -0.43
PSMD4-203ENST00000427779 ZNF818PQ6ZRF7 136 aa12.39□□□□□ -0.43
PSMD4-203ENST00000427779 NDUFA4L2Q9NRX3 87 aa12.39□□□□□ -0.43
PSMD4-203ENST00000427779 DAPK2Q9UIK4 370 aa12.39□□□□□ -0.43
PSMD4-203ENST00000427779 BLOC1S6Q9UL45 172 aa12.39□□□□□ -0.43
PSMD4-203ENST00000427779 APLNQ9ULZ1 77 aa12.39□□□□□ -0.43
PSMD4-203ENST00000427779 IGKV3-7A0A075B6H7 116 aa12.38□□□□□ -0.43
PSMD4-203ENST00000427779 YIF1AO95070 293 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms