RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 RPL19P84098 196 aaKnown RBP4.06□□□□□ -1.76
LINC00458-202ENST00000427299 SLC38A11Q08AI6 406 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF154Q13106 437 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 TBC1D28Q2M2D7 210 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 RSPO1Q2MKA7 263 aaPredicted RBP4.06□□□□□ -1.76
LINC00458-202ENST00000427299 DCAF12Q5T6F0 453 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 YRDCQ86U90 279 aaKnown RBP4.06□□□□□ -1.76
LINC00458-202ENST00000427299 CALHM1Q8IU99 346 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 TMEM183AQ8IXX5 376 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 UBALD2Q8IYN6 164 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 FAM58AQ8N1B3 248 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF709Q8N972 641 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 WDR31Q8NA23 367 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 OR51H1Q8NH63 302 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 MRPL30Q8TCC3 161 aaKnown RBP4.06□□□□□ -1.76
LINC00458-202ENST00000427299 MBD3L1Q8WWY6 194 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 APH1AQ96BI3 265 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 ACY3Q96HD9 319 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 FAM210BQ96KR6 192 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 SMIM7Q9BQ49 75 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 ALKBH7Q9BT30 221 aaPredicted RBP4.06□□□□□ -1.76
LINC00458-202ENST00000427299 GGACTQ9BVM4 153 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 OR51I2Q9H344 312 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 PROK2Q9HC23 129 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 PSENENQ9NZ42 101 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 GNG13Q9P2W3 67 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 CACNG5Q9UF02 275 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 RNF115Q9Y4L5 304 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 RBM7Q9Y580 266 aaKnown RBP4.06□□□□□ -1.76
LINC00458-202ENST00000427299 SDK2Q58EX2 2172 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 FREM1Q5H8C1 2179 aa4.06□□□□□ -1.76
LINC00458-202ENST00000427299 SPTBN5Q9NRC6 3674 aaKnown RBP4.06□□□□□ -1.76
LINC00458-202ENST00000427299 XIRP2A4UGR9 3374 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 SZT2Q5T011 3432 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 IGHV4-61A0A0C4DH41 118 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 TMEM30CPA0ZSE6 113 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 TMEM89A2RUT3 159 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 C5orf49A4QMS7 147 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF727A8MUV8 499 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 G3V3Y1 287 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 H7BYZ3 331 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 M0R296 226 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HMGB3O15347 200 aaKnown RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 CHST1O43916 411 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 PDE6DO43924 150 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST1H2BKO60814 126 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 MPDU1O75352 247 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 PGLYRP1O75594 196 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 KLF7O75840 302 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 TRAPPC6AO75865 159 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HRASP01112 189 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 IGHV4-59P01825 116 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST1H2BJP06899 126 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 PSG2P11465 335 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 CD99P14209 185 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST1H1BP16401 226 aaKnown RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 COX5AP20674 150 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST1H2BOP23527 126 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 OTX2P32243 289 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST1H2BBP33778 126 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 SRP14P37108 136 aaKnown RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST1H2BDP58876 126 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 PKIAP61925 76 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 PPP1CBP62140 327 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST1H2BCP62807 126 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 RUNX1Q01196 453 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 MEF2BQ02080 365 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 TMEM267Q0VDI3 215 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HERPUD1Q15011 391 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 P2RY6Q15077 328 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 TGIF1Q15583 401 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 IGFBP7Q16270 282 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST2H2BEQ16778 126 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 LRRC75BQ2VPJ9 315 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HLA-BQ31612 363 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 PDLIM3Q53GG5 364 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 OR2B11Q5JQS5 317 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 ACER2Q5QJU3 275 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 NCMAPQ5T1S8 102 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 OR2T2Q6IF00 324 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 P4HA3Q7Z4N8 544 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 TRPT1Q86TN4 253 aaKnown RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST3H2BBQ8N257 126 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF525Q8N782 197 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF645Q8N7E2 425 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 OR10A7Q8NGE5 316 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 ABHD3Q8WU67 409 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST1H2BHQ93079 126 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 PACRGQ96M98 296 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 NOL4LQ96MY1 436 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 GUCD1Q96NT3 240 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST1H2BNQ99877 126 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 HIST1H2BMQ99879 126 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 DCTN5Q9BTE1 182 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 DDA1Q9BW61 102 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 WDR61Q9GZS3 305 aaKnown RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 CCL28Q9NRJ3 127 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 KCNIP1Q9NZI2 227 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 DOK5Q9P104 306 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms