RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 NDPQ00604 133 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 IAH1Q2TAA2 248 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-204ENST00000427239 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-204ENST00000427239 OR10C1Q96KK4 312 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 MED28Q9H204 178 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 FAM25EA8MYX2 175 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 FAM90A26D6RGX4 464 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 E7EUB6 86 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 FOXL1Q12952 345 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 C10orf55Q5SWW7 151 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 MRPL41Q8IXM3 137 aaKnown RBP12.14□□□□□ -0.47
COL11A1-204ENST00000427239 STPG2Q8N412 459 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 LFNGQ8NES3 379 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 OR5M8Q8NGP6 311 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 TAF15Q92804 592 aaKnown RBP eCLIP12.14□□□□□ -0.47
COL11A1-204ENST00000427239 C2orf50Q96LR7 162 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 FYTTD1Q96QD9 318 aaKnown RBP12.14□□□□□ -0.47
COL11A1-204ENST00000427239 FAM103A1Q9BTL3 118 aaKnown RBP12.14□□□□□ -0.47
COL11A1-204ENST00000427239 HSPB7Q9UBY9 170 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 FBXO7Q9Y3I1 522 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 PLXNB1O43157 2135 aa12.13□□□□□ -0.47
COL11A1-204ENST00000427239 TRAV41A0A0B4J266 112 aa12.13□□□□□ -0.47
COL11A1-204ENST00000427239 HMX3A6NHT5 357 aa12.13□□□□□ -0.47
COL11A1-204ENST00000427239 CCSO14618 274 aa12.13□□□□□ -0.47
COL11A1-204ENST00000427239 MYOD1P15172 320 aa12.13□□□□□ -0.47
COL11A1-204ENST00000427239 CYCSP99999 105 aaKnown RBP12.13□□□□□ -0.47
COL11A1-204ENST00000427239 PRCDQ00LT1 54 aa12.13□□□□□ -0.47
COL11A1-204ENST00000427239 TNFRSF9Q07011 255 aa12.13□□□□□ -0.47
COL11A1-204ENST00000427239 C2orf68Q2NKX9 166 aa12.13□□□□□ -0.47
COL11A1-204ENST00000427239 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-204ENST00000427239 HINT2Q9BX68 163 aa12.13□□□□□ -0.47
COL11A1-204ENST00000427239 GSKIPQ9P0R6 139 aa12.13□□□□□ -0.47
COL11A1-204ENST00000427239 A0A1W2PN81 502 aa12.12□□□□□ -0.47
COL11A1-204ENST00000427239 CLPSL1A2RUU4 121 aa12.12□□□□□ -0.47
COL11A1-204ENST00000427239 CGB1A6NKQ9 187 aa12.12□□□□□ -0.47
COL11A1-204ENST00000427239 TEX22C9J3V5 150 aa12.12□□□□□ -0.47
COL11A1-204ENST00000427239 GOSR2O14653 212 aa12.12□□□□□ -0.47
COL11A1-204ENST00000427239 CHRNA7P36544 502 aa12.12□□□□□ -0.47
COL11A1-204ENST00000427239 RRAS2P62070 204 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-204ENST00000427239 ID3Q02535 119 aa12.12□□□□□ -0.47
COL11A1-204ENST00000427239 UNQ5815/PRO19632Q6UWF5 114 aa12.12□□□□□ -0.47
COL11A1-204ENST00000427239 CENPVQ7Z7K6 275 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-204ENST00000427239 TMEM158Q8WZ71 300 aa12.12□□□□□ -0.47
COL11A1-204ENST00000427239 ST6GAL2Q96JF0 529 aa12.12□□□□□ -0.47
COL11A1-204ENST00000427239 NOL4LQ96MY1 436 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-204ENST00000427239 WNT10AQ9GZT5 417 aa12.12□□□□□ -0.47
COL11A1-204ENST00000427239 A0A1B0GW64 132 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 TMEM89A2RUT3 159 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 INS-IGF2F8WCM5 200 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 SLC35B1P78383 322 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 TMEM95Q3KNT9 176 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 CXorf66Q5JRM2 361 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-204ENST00000427239 OR4D5Q8NGN0 318 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 SUN5Q8TC36 379 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 PLEKHA3Q9HB20 300 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 MGAT4CQ9UBM8 478 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 LINC00527Q9UJ94 153 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 RNF114Q9Y508 228 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 WSB1Q9Y6I7 421 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 G3V318 75 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 MED6O75586 246 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 NKX2-1P43699 371 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-204ENST00000427239 ERHP84090 104 aaKnown RBP12.11□□□□□ -0.47
COL11A1-204ENST00000427239 ECSCRQ19T08 205 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 KRTAP24-1Q3LI83 254 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 C19orf54Q5BKX5 351 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 TTC9CQ8N5M4 171 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 OR10W1Q8NGF6 305 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 NMES1Q9C002 83 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 ENY2Q9NPA8 101 aa12.11□□□□□ -0.47
COL11A1-204ENST00000427239 IGLC7A0M8Q6 106 aa12.1□□□□□ -0.47
COL11A1-204ENST00000427239 CEBPZOSA8MTT3 80 aa12.1□□□□□ -0.47
COL11A1-204ENST00000427239 LY86O95711 162 aa12.1□□□□□ -0.47
COL11A1-204ENST00000427239 MDKP21741 143 aaPredicted RBP12.1□□□□□ -0.47
COL11A1-204ENST00000427239 PPIFP30405 207 aaKnown RBP12.1□□□□□ -0.47
COL11A1-204ENST00000427239 H2BFSP57053 126 aa12.1□□□□□ -0.47
COL11A1-204ENST00000427239 RIPPLY3P57055 190 aa12.1□□□□□ -0.47
COL11A1-204ENST00000427239 WT1-ASQ06250 92 aa12.1□□□□□ -0.47
COL11A1-204ENST00000427239 ASPHD1Q5U4P2 390 aa12.1□□□□□ -0.47
COL11A1-204ENST00000427239 NOXA1Q86UR1 476 aa12.1□□□□□ -0.47
COL11A1-204ENST00000427239 HIPK2Q9H2X6 1198 aa12.1□□□□□ -0.47
COL11A1-204ENST00000427239 ZFP57Q9NU63 452 aa12.1□□□□□ -0.47
COL11A1-204ENST00000427239 PSMB11A5LHX3 300 aa12.09□□□□□ -0.47
COL11A1-204ENST00000427239 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
COL11A1-204ENST00000427239 SYNGR2O43760 224 aa12.09□□□□□ -0.47
COL11A1-204ENST00000427239 SIX6O95475 246 aa12.09□□□□□ -0.47
COL11A1-204ENST00000427239 CRYGCP07315 174 aa12.09□□□□□ -0.47
COL11A1-204ENST00000427239 APELAP0DMC3 54 aa12.09□□□□□ -0.47
COL11A1-204ENST00000427239 OR13C7P0DN81 318 aa12.09□□□□□ -0.47
COL11A1-204ENST00000427239 CFHR3Q02985 330 aa12.09□□□□□ -0.47
COL11A1-204ENST00000427239 IL15RAQ13261 267 aa12.09□□□□□ -0.47
COL11A1-204ENST00000427239 FCN2Q15485 313 aa12.09□□□□□ -0.47
COL11A1-204ENST00000427239 TEX38Q6PEX7 206 aa12.09□□□□□ -0.47
COL11A1-204ENST00000427239 COMMD1Q8N668 190 aa12.09□□□□□ -0.47
COL11A1-204ENST00000427239 TMA7Q9Y2S6 64 aaKnown RBP12.09□□□□□ -0.47
COL11A1-204ENST00000427239 NXPH3O95157 252 aa12.08□□□□□ -0.47
COL11A1-204ENST00000427239 IGHG4P01861 327 aa12.08□□□□□ -0.47
COL11A1-204ENST00000427239 AREGP15514 252 aa12.08□□□□□ -0.47
COL11A1-204ENST00000427239 CTRB1P17538 263 aa12.08□□□□□ -0.47
COL11A1-204ENST00000427239 CXCL3P19876 107 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms