RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CHCHD1Q96BP2 118 aaKnown RBP12.32□□□□□ -0.44
PTPN13-203ENST00000427191 ZNF385AQ96PM9 386 aaKnown RBP12.32□□□□□ -0.44
PTPN13-203ENST00000427191 FOXC2Q99958 501 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 MS4A6AQ9H2W1 248 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 KLHDC2Q9Y2U9 406 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 OR10J3Q5JRS4 329 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 ZG16O60844 167 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 LEPP41159 167 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 OR5AN1Q8NGI8 311 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 RTN4RQ9BZR6 473 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 SLC50A1Q9BRV3 221 aa12.32□□□□□ -0.44
PTPN13-203ENST00000427191 C1QAP02745 245 aa12.31□□□□□ -0.44
PTPN13-203ENST00000427191 EFNB1P98172 346 aa12.31□□□□□ -0.44
PTPN13-203ENST00000427191 SRSF1Q07955 248 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTPN13-203ENST00000427191 ATXN8Q156A1 80 aa12.31□□□□□ -0.44
PTPN13-203ENST00000427191 RCC1LQ96I51 464 aaKnown RBP12.31□□□□□ -0.44
PTPN13-203ENST00000427191 GDF15Q99988 308 aa12.31□□□□□ -0.44
PTPN13-203ENST00000427191 PTPRFP10586 1907 aa12.31□□□□□ -0.44
PTPN13-203ENST00000427191 FER1L6-AS1Q8NA97 138 aa12.31□□□□□ -0.44
PTPN13-203ENST00000427191 LGALS1P09382 135 aaKnown RBP12.31□□□□□ -0.44
PTPN13-203ENST00000427191 MORN3Q6PF18 240 aaPredicted RBP12.31□□□□□ -0.44
PTPN13-203ENST00000427191 BHLHA9Q7RTU4 235 aa12.31□□□□□ -0.44
PTPN13-203ENST00000427191 PLA2G2FQ9BZM2 168 aa12.31□□□□□ -0.44
PTPN13-203ENST00000427191 CEP250Q9BV73 2442 aa12.31□□□□□ -0.44
PTPN13-203ENST00000427191 DPM2O94777 84 aa12.31□□□□□ -0.44
PTPN13-203ENST00000427191 ZNF600Q6ZNG1 722 aa12.31□□□□□ -0.44
PTPN13-203ENST00000427191 APOMO95445 188 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 FGF11Q92914 225 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 EAF1Q96JC9 268 aaPredicted RBP12.3□□□□□ -0.44
PTPN13-203ENST00000427191 DUX3Q96PT4 197 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 TRAV24A0A0B4J272 114 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 ATOH7Q8N100 152 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 MDKP21741 143 aaPredicted RBP12.3□□□□□ -0.44
PTPN13-203ENST00000427191 CD69Q07108 199 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 C3AR1Q16581 482 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 ST20Q9HBF5 79 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 ATP5L2Q7Z4Y8 100 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 TEX45Q8NA69 505 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 CCL19Q99731 98 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 H2BFSP57053 126 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 ZNF818PQ6ZRF7 136 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 TDGF1P13385 188 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 MRPL52Q86TS9 123 aaKnown RBP12.3□□□□□ -0.44
PTPN13-203ENST00000427191 FAM181AQ8N9Y4 354 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 ANK1P16157 1881 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 POLEQ07864 2286 aa12.3□□□□□ -0.44
PTPN13-203ENST00000427191 IGLV1-36A0A0B4J1U3 117 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 A0A0J9YW62 118 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 ZFAND6Q6FIF0 208 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 CENPVQ7Z7K6 275 aaPredicted RBP12.29□□□□□ -0.44
PTPN13-203ENST00000427191 SCARF2Q96GP6 870 aaPredicted RBP12.29□□□□□ -0.44
PTPN13-203ENST00000427191 OTORQ9NRC9 128 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 ZNF831Q5JPB2 1677 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 ATXN7O15265 892 aaPredicted RBP12.29□□□□□ -0.44
PTPN13-203ENST00000427191 TMEM42Q69YG0 159 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 C1orf162Q8NEQ5 155 aaPredicted RBP12.29□□□□□ -0.44
PTPN13-203ENST00000427191 KLF14Q8TD94 323 aaPredicted RBP12.29□□□□□ -0.44
PTPN13-203ENST00000427191 CYSLTR1Q9Y271 337 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 FAM90A9PA6NNJ1 464 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 F2Z2F3 143 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 C5orf67F2Z3F1 127 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 CELA2BP08218 269 aaPredicted RBP12.29□□□□□ -0.44
PTPN13-203ENST00000427191 IFI27L2Q9H2X8 130 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 RPRMQ9NS64 109 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 LHFPL6Q9Y693 200 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 A8MWV9 139 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 TMEM238C9JI98 176 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 PRSS12P56730 875 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 COL9A1P20849 921 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 OR5P3Q8WZ94 311 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 LAMTOR2Q9Y2Q5 125 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 MYO7BQ6PIF6 2116 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 IGHV1-69-2A0A0G2JMI3 117 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 M0R381 172 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 HBDP02042 147 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 IL6RP08887 468 aaPredicted RBP12.29□□□□□ -0.44
PTPN13-203ENST00000427191 NPFFR1Q9GZQ6 430 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 MYLKQ15746 1914 aa12.29□□□□□ -0.44
PTPN13-203ENST00000427191 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
PTPN13-203ENST00000427191 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.28□□□□□ -0.44
PTPN13-203ENST00000427191 CDK2AP2O75956 126 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 GNB1LQ9BYB4 327 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 HRKO00198 91 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 HOXA3O43365 443 aaPredicted RBP12.28□□□□□ -0.44
PTPN13-203ENST00000427191 ICAM4Q14773 271 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 OR9G4Q8NGQ1 327 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 TM2D1Q9BX74 207 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 DOCK7Q96N67 2140 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 IGKV3OR2-268A0A0C4DH90 116 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 TRGV3P03979 118 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 ZNF585BQ52M93 769 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 NPIPB3Q92617 1050 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 ZNF501Q96CX3 271 aaPredicted RBP12.28□□□□□ -0.44
PTPN13-203ENST00000427191 LRRK1Q38SD2 2015 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 CT83Q5H943 113 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 GSN-AS1Q9NRJ2 163 aa12.28□□□□□ -0.44
PTPN13-203ENST00000427191 CASP8AP2Q9UKL3 1982 aa12.27□□□□□ -0.44
PTPN13-203ENST00000427191 FOXS1O43638 330 aa12.27□□□□□ -0.44
PTPN13-203ENST00000427191 ERVK11-1P61568 191 aa12.27□□□□□ -0.44
PTPN13-203ENST00000427191 MPDZO75970 2070 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms