RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 GIMAP1Q8WWP7 306 aa7.48□□□□□ -1.21
GACAT3-201ENST00000426539 ZNF414Q96IQ9 312 aa7.48□□□□□ -1.21
GACAT3-201ENST00000426539 CXorf58Q96LI9 332 aa7.48□□□□□ -1.21
GACAT3-201ENST00000426539 ZNF436Q9C0F3 470 aaPredicted RBP7.48□□□□□ -1.21
GACAT3-201ENST00000426539 MRPL18Q9H0U6 180 aaKnown RBP7.48□□□□□ -1.21
GACAT3-201ENST00000426539 TMEM140Q9NV12 185 aa7.48□□□□□ -1.21
GACAT3-201ENST00000426539 LOC102724200A0A096LPH7 203 aaPredicted RBP7.47□□□□□ -1.21
GACAT3-201ENST00000426539 A0A0A6YYH2 397 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 TRAV25A0A0B4J276 109 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 LOC100506127A0A0U1RQW1 187 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 TMEM238LA0A1B0GVL6 79 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 MEIS3P1A6NDR6 274 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 A6NJ64 397 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 F8W735 103 aaPredicted RBP7.47□□□□□ -1.21
GACAT3-201ENST00000426539 TGFBR1P36897 503 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 CATR1Q13166 79 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 TMEM17Q86X19 198 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 TMEM190Q8WZ59 177 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 MARC2Q969Z3 335 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 SRSF8Q9BRL6 282 aaKnown RBP7.47□□□□□ -1.21
GACAT3-201ENST00000426539 AIFM2Q9BRQ8 373 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 QTRT1Q9BXR0 403 aaKnown RBP7.47□□□□□ -1.21
GACAT3-201ENST00000426539 YTHDF1Q9BYJ9 559 aaKnown RBP7.47□□□□□ -1.21
GACAT3-201ENST00000426539 COMMD5Q9GZQ3 224 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 PLEKHA2Q9HB19 425 aa7.47□□□□□ -1.21
GACAT3-201ENST00000426539 MRPL27Q9P0M9 148 aaKnown RBP7.47□□□□□ -1.21
GACAT3-201ENST00000426539 ALMS1Q8TCU4 4167 aa7.46□□□□□ -1.21
GACAT3-201ENST00000426539 TEX50A0A1B0GTY4 177 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 TGOLN2O43493 480 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 PGLYRP1O75594 196 aaPredicted RBP7.46□□□□□ -1.22
GACAT3-201ENST00000426539 ATP6V1G2O95670 118 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 FGF2P09038 288 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 ELLP55199 621 aaPredicted RBP7.46□□□□□ -1.22
GACAT3-201ENST00000426539 ANKRD55Q3KP44 614 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 AADACL3Q5VUY0 350 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 PLET1Q6UQ28 207 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 DHRS11Q6UWP2 260 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 GDPD1Q8N9F7 314 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 OR1L6Q8NGR2 347 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 VN1R17PQ8TDU5 208 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 CHRDL1Q9BU40 450 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 C5orf66Q9H5L9 145 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 DIABLOQ9NR28 239 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 COMMD9Q9P000 198 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 UBQLN2Q9UHD9 624 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 ANAPC10Q9UM13 185 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 UFC1Q9Y3C8 167 aa7.46□□□□□ -1.22
GACAT3-201ENST00000426539 IGHV3-21A0A0B4J1V1 117 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 A0A0J9YWU9 116 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 OR2T8A6NH00 312 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 K7EIM0 57 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 XRCC3O43542 346 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 RLN1P04808 185 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 SERPINE2P07093 398 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 TRAPPC2P0DI81 140 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 TRAPPC2BP0DI82 140 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 OR13C7P0DN81 318 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 ADMP35318 185 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 CBX5P45973 191 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 RFX2P48378 723 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 NEDD8Q15843 81 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 ODF3L2Q3SX64 289 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 SLC25A24Q6NUK1 477 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 RBPMS2Q6ZRY4 209 aaKnown RBP7.45□□□□□ -1.22
GACAT3-201ENST00000426539 WFDC3Q8IUB2 231 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 OR2C3Q8N628 320 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 DMBX1Q8NFW5 382 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 CD300LFQ8TDQ1 290 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 SCARB1Q8WTV0 552 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 FCAMRQ8WWV6 532 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 LINC00476Q8WZB0 136 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 MOB3AQ96BX8 217 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 SPAG8Q99932 426 aaPredicted RBP7.45□□□□□ -1.22
GACAT3-201ENST00000426539 NDUFA4L2Q9NRX3 87 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 EHFQ9NZC4 300 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 THYN1Q9P016 225 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 NSG2Q9Y328 171 aa7.45□□□□□ -1.22
GACAT3-201ENST00000426539 F11RQ9Y624 299 aaKnown RBP7.45□□□□□ -1.22
GACAT3-201ENST00000426539 IGHV3OR16-8A0A075B7F1 116 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 DBX1A6NMT0 343 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 MARCH11A6NNE9 402 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 TSPAN4O14817 238 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 PMP2P02689 132 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 NAT1P18440 290 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 F2RP25116 425 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 G6PCP35575 357 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 LPAR6P43657 344 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 HERV-K104P61576 105 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 THOC7Q6I9Y2 204 aaKnown RBP7.44□□□□□ -1.22
GACAT3-201ENST00000426539 Q6ZWC4 215 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 OR1L8Q8NGR8 309 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 BSCL2Q96G97 398 aaPredicted RBP7.44□□□□□ -1.22
GACAT3-201ENST00000426539 ZNF2Q9BSG1 426 aaPredicted RBP7.44□□□□□ -1.22
GACAT3-201ENST00000426539 FXYD6Q9H0Q3 95 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 C21orf62Q9NYP8 219 aa7.44□□□□□ -1.22
GACAT3-201ENST00000426539 NDUFA4O00483 81 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 SPRY2O43597 315 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 ZNF207O43670 478 aaKnown RBP7.43□□□□□ -1.22
GACAT3-201ENST00000426539 TMEM127O75204 238 aa7.43□□□□□ -1.22
GACAT3-201ENST00000426539 KRASP01116 189 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms