RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 RAB11AP62491 216 aa12.08□□□□□ -0.47
GINS3-203ENST00000426538 ERHP84090 104 aaKnown RBP12.08□□□□□ -0.47
GINS3-203ENST00000426538 ZNF266Q14584 549 aa12.08□□□□□ -0.47
GINS3-203ENST00000426538 CLINT1Q14677 625 aa12.08□□□□□ -0.47
GINS3-203ENST00000426538 TMEM14EPQ6UXP3 125 aa12.08□□□□□ -0.47
GINS3-203ENST00000426538 ZNF767PQ75MW2 155 aa12.08□□□□□ -0.47
GINS3-203ENST00000426538 NANPQ8TBE9 248 aa12.08□□□□□ -0.47
GINS3-203ENST00000426538 ITPR2Q14571 2701 aa12.08□□□□□ -0.48
GINS3-203ENST00000426538 HECTD1Q9ULT8 2610 aa12.08□□□□□ -0.48
GINS3-203ENST00000426538 SCAF4O95104 1147 aaKnown RBP12.08□□□□□ -0.48
GINS3-203ENST00000426538 NDUFA3O95167 84 aa12.08□□□□□ -0.48
GINS3-203ENST00000426538 GNB1P62873 340 aa12.08□□□□□ -0.48
GINS3-203ENST00000426538 FAM120AOSQ5T036 256 aa12.08□□□□□ -0.48
GINS3-203ENST00000426538 RPL7L1Q6DKI1 246 aaKnown RBP12.08□□□□□ -0.48
GINS3-203ENST00000426538 OR8G2PQ6IF36 304 aa12.08□□□□□ -0.48
GINS3-203ENST00000426538 MRPL41Q8IXM3 137 aaKnown RBP12.08□□□□□ -0.48
GINS3-203ENST00000426538 CIARTQ8N365 385 aaPredicted RBP12.08□□□□□ -0.48
GINS3-203ENST00000426538 OR10P1Q8NGE3 313 aa12.08□□□□□ -0.48
GINS3-203ENST00000426538 TNCP24821 2201 aa12.07□□□□□ -0.48
GINS3-203ENST00000426538 CNIH1O95406 144 aa12.07□□□□□ -0.48
GINS3-203ENST00000426538 CFDP00746 253 aaPredicted RBP12.07□□□□□ -0.48
GINS3-203ENST00000426538 OR8U8P0C7N1 319 aa12.07□□□□□ -0.48
GINS3-203ENST00000426538 SNCAP37840 140 aa12.07□□□□□ -0.48
GINS3-203ENST00000426538 HTR2BP41595 481 aa12.07□□□□□ -0.48
GINS3-203ENST00000426538 RPL27AP46776 148 aaKnown RBP12.07□□□□□ -0.48
GINS3-203ENST00000426538 EXOSC2Q13868 293 aaKnown RBP12.07□□□□□ -0.48
GINS3-203ENST00000426538 C5orf64Q2M2E5 130 aa12.07□□□□□ -0.48
GINS3-203ENST00000426538 BAP18Q8IXM2 172 aa12.07□□□□□ -0.48
GINS3-203ENST00000426538 LILRB2Q8N423 598 aa12.07□□□□□ -0.48
GINS3-203ENST00000426538 Q8N6K4 173 aa12.07□□□□□ -0.48
GINS3-203ENST00000426538 STOML3Q8TAV4 291 aa12.07□□□□□ -0.48
GINS3-203ENST00000426538 OR4C12Q96R67 309 aa12.07□□□□□ -0.48
GINS3-203ENST00000426538 UBQLN2Q9UHD9 624 aa12.07□□□□□ -0.48
GINS3-203ENST00000426538 E7EUB6 86 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 FCN1O00602 326 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 DFFBO76075 338 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 COMPP49747 757 aaPredicted RBP12.06□□□□□ -0.48
GINS3-203ENST00000426538 MRGPRG-AS1Q2M3A8 158 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 C10orf55Q5SWW7 151 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 UBAC2Q8NBM4 344 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 SLC24A4Q8NFF2 622 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 OR10W1Q8NGF6 305 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 PINX1Q96BK5 328 aaKnown RBP12.06□□□□□ -0.48
GINS3-203ENST00000426538 SSX3Q99909 188 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 WFDC1Q9HC57 220 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 CCDC168Q8NDH2 2452 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 C15orf62A8K5M9 175 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 CA2P00918 260 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 IFNA4P05014 189 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 NPY1RP25929 384 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 ALKAL2Q6UX46 152 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 STPG2Q8N412 459 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 PHYHIPLQ96FC7 376 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 ATP5SQ99766 215 aa12.06□□□□□ -0.48
GINS3-203ENST00000426538 INS-IGF2F8WCM5 200 aa12.05□□□□□ -0.48
GINS3-203ENST00000426538 IFNA5P01569 189 aa12.05□□□□□ -0.48
GINS3-203ENST00000426538 ATP5IP56385 69 aaPredicted RBP12.05□□□□□ -0.48
GINS3-203ENST00000426538 SLC38A11Q08AI6 406 aa12.05□□□□□ -0.48
GINS3-203ENST00000426538 ARL16Q0P5N6 197 aa12.05□□□□□ -0.48
GINS3-203ENST00000426538 ATP6V1FQ16864 119 aa12.05□□□□□ -0.48
GINS3-203ENST00000426538 LRRC75BQ2VPJ9 315 aa12.05□□□□□ -0.48
GINS3-203ENST00000426538 FBLN7Q53RD9 439 aa12.05□□□□□ -0.48
GINS3-203ENST00000426538 EIF5AL1Q6IS14 154 aaKnown RBP12.05□□□□□ -0.48
GINS3-203ENST00000426538 SLC25A24Q6NUK1 477 aa12.05□□□□□ -0.48
GINS3-203ENST00000426538 ETV3LQ6ZN32 361 aa12.05□□□□□ -0.48
GINS3-203ENST00000426538 RASL11BQ9BPW5 248 aa12.05□□□□□ -0.48
GINS3-203ENST00000426538 PMS2P5A8MQ11 134 aa12.04□□□□□ -0.48
GINS3-203ENST00000426538 OR13C7P0DN81 318 aa12.04□□□□□ -0.48
GINS3-203ENST00000426538 SUB1P53999 127 aaKnown RBP eCLIP12.04□□□□□ -0.48
GINS3-203ENST00000426538 HAPLN4Q86UW8 402 aa12.04□□□□□ -0.48
GINS3-203ENST00000426538 SCARB1Q8WTV0 552 aa12.04□□□□□ -0.48
GINS3-203ENST00000426538 SRSF12Q8WXF0 261 aaKnown RBP12.04□□□□□ -0.48
GINS3-203ENST00000426538 SOX21Q9Y651 276 aaPredicted RBP12.04□□□□□ -0.48
GINS3-203ENST00000426538 CREBBPQ92793 2442 aa12.04□□□□□ -0.48
GINS3-203ENST00000426538 ABCA1O95477 2261 aa12.03□□□□□ -0.48
GINS3-203ENST00000426538 CGB1A6NKQ9 187 aa12.03□□□□□ -0.48
GINS3-203ENST00000426538 ZNF562Q6V9R5 426 aa12.03□□□□□ -0.48
GINS3-203ENST00000426538 TEX29Q8N6K0 151 aa12.03□□□□□ -0.48
GINS3-203ENST00000426538 RAB14P61106 215 aa12.03□□□□□ -0.48
GINS3-203ENST00000426538 WT1-ASQ06250 92 aa12.03□□□□□ -0.48
GINS3-203ENST00000426538 FXYD3Q14802 87 aa12.03□□□□□ -0.48
GINS3-203ENST00000426538 AANATQ16613 207 aa12.03□□□□□ -0.48
GINS3-203ENST00000426538 C2orf83Q53S99 150 aa12.03□□□□□ -0.48
GINS3-203ENST00000426538 HSD17B13Q7Z5P4 300 aaPredicted RBP12.03□□□□□ -0.48
GINS3-203ENST00000426538 Q8N9W7 124 aa12.03□□□□□ -0.48
GINS3-203ENST00000426538 SCGB1C1Q8TD33 95 aa12.03□□□□□ -0.48
GINS3-203ENST00000426538 CELSR1Q9NYQ6 3014 aa12.03□□□□□ -0.48
GINS3-203ENST00000426538 FBXO24O75426 580 aa12.02□□□□□ -0.49
GINS3-203ENST00000426538 HSD17B11Q8NBQ5 300 aa12.02□□□□□ -0.49
GINS3-203ENST00000426538 PIFOQ8TCI5 191 aa12.02□□□□□ -0.49
GINS3-203ENST00000426538 ABHD5Q8WTS1 349 aa12.02□□□□□ -0.49
GINS3-203ENST00000426538 SSMEM1Q8WWF3 244 aa12.02□□□□□ -0.49
GINS3-203ENST00000426538 C22orf15Q8WYQ4 148 aa12.02□□□□□ -0.49
GINS3-203ENST00000426538 RBM14Q96PK6 669 aaKnown RBP12.02□□□□□ -0.49
GINS3-203ENST00000426538 SRSF8Q9BRL6 282 aaKnown RBP12.02□□□□□ -0.49
GINS3-203ENST00000426538 SLC25A33Q9BSK2 321 aa12.02□□□□□ -0.49
GINS3-203ENST00000426538 PITPNC1Q9UKF7 332 aa12.02□□□□□ -0.49
GINS3-203ENST00000426538 ITPR3Q14573 2671 aa12.02□□□□□ -0.49
GINS3-203ENST00000426538 PLXNB1O43157 2135 aa12.01□□□□□ -0.49
GINS3-203ENST00000426538 A0A1B0GW64 132 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 262.9 ms