RNA–Protein interactions for RNA: ENST00000426343.5

HDLBP-212, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-212ENST00000426343 TMEM213A2RRL7 107 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 A8MWP6 167 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 TPPPO94811 219 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 KRASP01116 189 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 OR13C7P0DN81 318 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 ELK1P19419 428 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 S100GP29377 79 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 CD81P60033 236 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 TSPAN5P62079 268 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 CASC10Q5T4H9 136 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 LINC00322Q6ZN03 302 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-212ENST00000426343 GDPD1Q8N9F7 314 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 OR10W1Q8NGF6 305 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 VN1R17PQ8TDU5 208 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 NDUFA4L2Q9NRX3 87 aa13.4□□□□□ -0.26
HDLBP-212ENST00000426343 HPGDSO60760 199 aa13.39□□□□□ -0.27
HDLBP-212ENST00000426343 SNAPC5O75971 98 aa13.39□□□□□ -0.27
HDLBP-212ENST00000426343 SERPINE2P07093 398 aa13.39□□□□□ -0.27
HDLBP-212ENST00000426343 LYL1P12980 280 aa13.39□□□□□ -0.27
HDLBP-212ENST00000426343 EDN2P20800 178 aa13.39□□□□□ -0.27
HDLBP-212ENST00000426343 RCVRNP35243 200 aa13.39□□□□□ -0.27
HDLBP-212ENST00000426343 UCP3P55916 312 aa13.39□□□□□ -0.27
HDLBP-212ENST00000426343 WT1-ASQ06250 92 aa13.39□□□□□ -0.27
HDLBP-212ENST00000426343 GUCA2BQ16661 112 aa13.39□□□□□ -0.27
HDLBP-212ENST00000426343 MZT2AQ6P582 158 aa13.39□□□□□ -0.27
HDLBP-212ENST00000426343 SNX29P2Q8IUI4 249 aa13.39□□□□□ -0.27
HDLBP-212ENST00000426343 FKBP11Q9NYL4 201 aa13.39□□□□□ -0.27
HDLBP-212ENST00000426343 GPR183P32249 361 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 G6PCP35575 357 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 PHLDA2Q53GA4 152 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 ZNF57Q68EA5 555 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-212ENST00000426343 PLET1Q6UQ28 207 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 UXS1Q8NBZ7 420 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 AP3S1Q92572 193 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 LSM10Q969L4 123 aaKnown RBP13.38□□□□□ -0.27
HDLBP-212ENST00000426343 MARC2Q969Z3 335 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 ATP6V0BQ99437 205 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 EDA2RQ9HAV5 297 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 PLEKHA3Q9HB20 300 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 PALMDQ9NP74 551 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 PRNDQ9UKY0 176 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 OR51B2Q9Y5P1 312 aa13.38□□□□□ -0.27
HDLBP-212ENST00000426343 IFNA6P05013 189 aa13.37□□□□□ -0.27
HDLBP-212ENST00000426343 CD7P09564 240 aa13.37□□□□□ -0.27
HDLBP-212ENST00000426343 C8orf88P0DMB2 117 aa13.37□□□□□ -0.27
HDLBP-212ENST00000426343 ELLP55199 621 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-212ENST00000426343 SLC25A24Q6NUK1 477 aa13.37□□□□□ -0.27
HDLBP-212ENST00000426343 SLC38A6Q8IZM9 456 aa13.37□□□□□ -0.27
HDLBP-212ENST00000426343 OR1L6Q8NGR2 347 aa13.37□□□□□ -0.27
HDLBP-212ENST00000426343 OR5B3Q8NH48 314 aa13.37□□□□□ -0.27
HDLBP-212ENST00000426343 CACNG8Q8WXS5 425 aa13.37□□□□□ -0.27
HDLBP-212ENST00000426343 WDR89Q96FK6 387 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-212ENST00000426343 TSC22D3Q99576 134 aa13.37□□□□□ -0.27
HDLBP-212ENST00000426343 NSG2Q9Y328 171 aa13.37□□□□□ -0.27
HDLBP-212ENST00000426343 F11RQ9Y624 299 aaKnown RBP13.37□□□□□ -0.27
HDLBP-212ENST00000426343 CEPT1Q9Y6K0 416 aa13.37□□□□□ -0.27
HDLBP-212ENST00000426343 OR11H12B2RN74 326 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 TGOLN2O43493 480 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 GABARAPO95166 117 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 ZNF182P17025 639 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-212ENST00000426343 CTF1Q16619 201 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 TM4SF20Q53R12 229 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 UNQ9165/PRO28630Q6UXU0 137 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 TBC1D26Q86UD7 250 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 ISOC1Q96CN7 298 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 TMEM56Q96MV1 263 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 HINT2Q9BX68 163 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 ZNF436Q9C0F3 470 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-212ENST00000426343 TMEM14BQ9NUH8 114 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 MRPL27Q9P0M9 148 aaKnown RBP13.36□□□□□ -0.27
HDLBP-212ENST00000426343 MLXQ9UH92 298 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 UFC1Q9Y3C8 167 aa13.36□□□□□ -0.27
HDLBP-212ENST00000426343 TRAV25A0A0B4J276 109 aa13.35□□□□□ -0.27
HDLBP-212ENST00000426343 FAM25AB3EWG3 89 aa13.35□□□□□ -0.27
HDLBP-212ENST00000426343 FAM25CB3EWG5 89 aa13.35□□□□□ -0.27
HDLBP-212ENST00000426343 FAM25GB3EWG6 89 aa13.35□□□□□ -0.27
HDLBP-212ENST00000426343 SMIM18P0DKX4 95 aa13.35□□□□□ -0.27
HDLBP-212ENST00000426343 SLC16A13Q7RTY0 426 aa13.35□□□□□ -0.27
HDLBP-212ENST00000426343 TMEM61Q8N0U2 210 aa13.35□□□□□ -0.27
HDLBP-212ENST00000426343 DEFB125Q8N687 156 aa13.35□□□□□ -0.27
HDLBP-212ENST00000426343 NAA50Q9GZZ1 169 aaKnown RBP13.35□□□□□ -0.27
HDLBP-212ENST00000426343 RBMY1BA6NDE4 496 aaKnown RBP13.34□□□□□ -0.27
HDLBP-212ENST00000426343 RBMY1EA6NEQ0 496 aaKnown RBP13.34□□□□□ -0.27
HDLBP-212ENST00000426343 C15orf61A6NNL5 157 aa13.34□□□□□ -0.27
HDLBP-212ENST00000426343 RBMY1DP0C7P1 496 aaKnown RBP13.34□□□□□ -0.27
HDLBP-212ENST00000426343 MFAP2P55001 183 aa13.34□□□□□ -0.27
HDLBP-212ENST00000426343 ANKRD55Q3KP44 614 aa13.34□□□□□ -0.27
HDLBP-212ENST00000426343 SPSB3Q6PJ21 355 aa13.34□□□□□ -0.27
HDLBP-212ENST00000426343 C15orf40Q8WUR7 153 aa13.34□□□□□ -0.27
HDLBP-212ENST00000426343 BSCL2Q96G97 398 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-212ENST00000426343 SEC22AQ96IW7 307 aa13.34□□□□□ -0.27
HDLBP-212ENST00000426343 HIPK2Q9H2X6 1198 aa13.34□□□□□ -0.27
HDLBP-212ENST00000426343 C21orf62Q9NYP8 219 aa13.34□□□□□ -0.27
HDLBP-212ENST00000426343 DYNC2H1Q8NCM8 4307 aaKnown RBP13.34□□□□□ -0.27
HDLBP-212ENST00000426343 DBX1A6NMT0 343 aa13.33□□□□□ -0.28
HDLBP-212ENST00000426343 H2BFWTQ7Z2G1 175 aa13.33□□□□□ -0.28
HDLBP-212ENST00000426343 OR1P1Q8NH06 330 aa13.33□□□□□ -0.28
HDLBP-212ENST00000426343 OR4A16Q8NH70 328 aa13.33□□□□□ -0.28
HDLBP-212ENST00000426343 SCARB1Q8WTV0 552 aa13.33□□□□□ -0.28
HDLBP-212ENST00000426343 TMEM190Q8WZ59 177 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms