RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 C15orf40Q8WUR7 153 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 NABP2Q9BQ15 211 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 ZNF251Q9BRH9 671 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 ATG101Q9BSB4 218 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 AGMATQ9BSE5 352 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 IFI27L2Q9H2X8 130 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 ZNF702PQ9H963 129 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 RDH8Q9NYR8 311 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 OR1A1Q9P1Q5 309 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 COMMD3Q9UBI1 195 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 RABL2AQ9UBK7 228 aaPredicted RBP1.94□□□□□ -2.1
VPS13A-208ENST00000423463 ZNF230Q9UIE0 474 aaPredicted RBP1.94□□□□□ -2.1
VPS13A-208ENST00000423463 ANXA10Q9UJ72 324 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 RABL2BQ9UNT1 228 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 GPR132Q9UNW8 380 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 MOB4Q9Y3A3 225 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 NF1P21359 2839 aa1.94□□□□□ -2.1
VPS13A-208ENST00000423463 DSCAML1Q8TD84 2053 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ATRQ13535 2644 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 IGHV3-72A0A0B4J1Y9 119 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 FAM25AB3EWG3 89 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 FAM25CB3EWG5 89 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 FAM25GB3EWG6 89 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 SULT1C2O00338 296 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 BET1O15155 118 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 HLA-DQB1P01920 261 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 EIF4EP06730 217 aaKnown RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 OR8U9P0C7N5 309 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 SAA2P0DJI9 122 aaPredicted RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 CT45A6P0DMU7 189 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 CT45A5P0DMU8 189 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 CT45A7P0DMV0 189 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 PRSS3P35030 304 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 OR3A3P47888 321 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 TAS2R20P59543 309 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 SPCS2Q15005 226 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 HERPUD1Q15011 391 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 MSMO1Q15800 293 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 TMEM69Q5SWH9 247 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ADAMTSL4-AS1Q5T5F5 129 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 C5orf56Q8N8D9 126 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 BEST4Q8NFU0 473 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 NPBQ8NG41 125 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 OR8U1Q8NH10 309 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 GIMAP1Q8WWP7 306 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 MAFIPQ8WZ33 124 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 TAF15Q92804 592 aaKnown RBP eCLIP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ABHD14BQ96IU4 210 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ADTRPQ96IZ2 230 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 GINS4Q9BRT9 223 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 PARP12Q9H0J9 701 aaKnown RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 SRD5A3Q9H8P0 318 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 PLSCR3Q9NRY6 295 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 NECAP2Q9NVZ3 263 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ELF5Q9UKW6 265 aaPredicted RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 RBM7Q9Y580 266 aaKnown RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 OR5H14A6NHG9 310 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 NCBP2LA6PVI3 153 aaKnown RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ZNF736B4DX44 427 aaPredicted RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ZNF701M0R085 212 aaPredicted RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 M0R1X1 148 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 HPGDSO60760 199 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 IGHG2P01859 326 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 APOA2P02652 100 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 OR5H8P0DN80 308 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 RRASP10301 218 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ELK1P19419 428 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 VDAC2P45880 294 aaPredicted RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 LGALS7P47929 136 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 LUMP51884 338 aaPredicted RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 TAS2R46P59540 309 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ARPC4P59998 168 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ACTBP60709 375 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 OPCMLQ14982 345 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 CDK10Q15131 360 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ABCA11PQ4W5N1 156 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 RPL39P5Q59GN2 51 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ZC2HC1BQ5TFG8 222 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 DHRS11Q6UWP2 260 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 COMMD1Q8N668 190 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 KLHDC1Q8N7A1 406 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 Q8N9W7 124 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 OR5AP2Q8NGF4 316 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 DYNC2LI1Q8TCX1 351 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 GPX8Q8TED1 209 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 CHPT1Q8WUD6 406 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 BORCS5Q969J3 196 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 TSNAXQ99598 290 aaKnown RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 CITED1Q99966 193 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 RASL11BQ9BPW5 248 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 MRPL20Q9BYC9 149 aaKnown RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 IFT46Q9NQC8 304 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 CCDC59Q9P031 241 aaKnown RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 NDUFA13Q9P0J0 144 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 ANAPC10Q9UM13 185 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 MRPS7Q9Y2R9 242 aaKnown RBP1.93□□□□□ -2.1
VPS13A-208ENST00000423463 SIGLEC9Q9Y336 463 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 WASHC3Q9Y3C0 194 aa1.93□□□□□ -2.1
VPS13A-208ENST00000423463 PRSS46E5RG02 174 aa1.92□□□□□ -2.1
VPS13A-208ENST00000423463 H0YJW9 148 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms