RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 DEGS1O15121 323 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 GAGE7O76087 117 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 GAGE12FP0CL80 117 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 GAGE12GP0CL81 117 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 GAGE12IP0CL82 117 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 SRD5A2P31213 254 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 PTGDSP41222 190 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 GAGE4Q13068 117 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 SGCBQ16585 318 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 SP5Q6BEB4 398 aaPredicted RBP5.74□□□□□ -1.49
CNOT4-205ENST00000423368 TMEM136Q6ZRR5 245 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 LINC00528Q8N1L1 170 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 OR1L1Q8NH94 360 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 SPIN2AQ99865 258 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 VGLL1Q99990 258 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 SPIN2BQ9BPZ2 258 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 ASPMQ8IZT6 3477 aa5.74□□□□□ -1.49
CNOT4-205ENST00000423368 IGKV1D-42A0A075B6H8 117 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 TRAV36DV7A0A075B6V5 113 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 CD300LBA8K4G0 201 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 H3BRM9 83 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 H3BVH4 76 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 MLNRO43193 412 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 ACTL6BO94805 426 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 G6PCP35575 357 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 TNP2Q05952 138 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 SRSF1Q07955 248 aaKnown RBP eCLIP5.73□□□□□ -1.49
CNOT4-205ENST00000423368 PSG5Q15238 335 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 LYSMD4Q5XG99 296 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 RSPO2Q6UXX9 243 aaPredicted RBP5.73□□□□□ -1.49
CNOT4-205ENST00000423368 DGAT2L6Q6ZPD8 337 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 ZNF818PQ6ZRF7 136 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 COLCA1Q6ZS62 124 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 Q6ZUT4 128 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 PCP2Q8IVA1 136 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 TMEM178AQ8NBL3 297 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 FAM168AQ92567 244 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 SPATA25Q9BR10 227 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 ZNF391Q9UJN7 358 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 CTXND1A0A1B0GTU2 59 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 SEC11AP67812 179 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 FHL3Q13643 280 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 GAB4Q2WGN9 574 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 MEIG1Q5JSS6 88 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 ZFAND6Q6FIF0 208 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 TMEM52Q8NDY8 209 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 LSM10Q969L4 123 aaKnown RBP5.73□□□□□ -1.49
CNOT4-205ENST00000423368 PRELID3AQ96N28 172 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 SFXN3Q9BWM7 321 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 TMEM222Q9H0R3 208 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 SCRT2Q9NQ03 307 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 YTHDF2Q9Y5A9 579 aaKnown RBP5.73□□□□□ -1.49
CNOT4-205ENST00000423368 CEP250Q9BV73 2442 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 MYO16Q9Y6X6 1858 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 A0A1W2PRE2 83 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 FOXI3A8MTJ6 420 aaPredicted RBP5.73□□□□□ -1.49
CNOT4-205ENST00000423368 ASAH2BP0C7U1 165 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 ARL14EPLP0DKL9 152 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 NTF4P34130 210 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 FXYD2P54710 66 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 RHOBP62745 196 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 HBG1P69891 147 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 HBG2P69892 147 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 DIAPH2-AS1Q14236 149 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 KLF17Q5JT82 389 aaPredicted RBP5.73□□□□□ -1.49
CNOT4-205ENST00000423368 PARM1Q6UWI2 310 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 TMEM25Q86YD3 366 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 SPACA3Q8IXA5 215 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 OR5AS1Q8N127 324 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 C8orf44Q96CB5 159 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 C1orf147Q96MC9 270 aaPredicted RBP5.73□□□□□ -1.49
CNOT4-205ENST00000423368 GPR82Q96P67 336 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.73□□□□□ -1.49
CNOT4-205ENST00000423368 ZNF355PQ9NSJ1 428 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 SOX21Q9Y651 276 aaPredicted RBP5.73□□□□□ -1.49
CNOT4-205ENST00000423368 NLRC5Q86WI3 1866 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 SIP14410 1827 aa5.73□□□□□ -1.49
CNOT4-205ENST00000423368 IGKV1-9A0A0C4DH69 117 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 PRR33A8MZF0 331 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 PPYP01298 95 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 IGHV3-7P01780 117 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 PSG2P11465 335 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 IL11P20809 199 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 EVI2AP22794 236 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 FBXW4P57775 412 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 OR8B8Q15620 311 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 TBR1Q16650 682 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 ZNF585BQ52M93 769 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 TTC32Q5I0X7 151 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 SSMEM1Q8WWF3 244 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 TM2D2Q9BX73 214 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 IGKV1D-13A0A0B4J2D9 117 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 FABP5P3A8MUU1 101 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 NRG2O14511 850 aaPredicted RBP5.72□□□□□ -1.49
CNOT4-205ENST00000423368 RER1O15258 196 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 SYNGR1O43759 233 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 SYNGR2O43760 224 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 SRSF10O75494 262 aaKnown RBP5.72□□□□□ -1.49
CNOT4-205ENST00000423368 IGLV3-27P01718 113 aa5.72□□□□□ -1.49
CNOT4-205ENST00000423368 HBZP02008 142 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms