RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 TTC9CQ8N5M4 171 aa11.58□□□□□ -0.56
USB1-202ENST00000423271 TMEM167AQ8TBQ9 72 aa11.58□□□□□ -0.56
USB1-202ENST00000423271 CD300LFQ8TDQ1 290 aa11.58□□□□□ -0.56
USB1-202ENST00000423271 PLEKHA2Q9HB19 425 aa11.58□□□□□ -0.56
USB1-202ENST00000423271 SCP2D1Q9UJQ7 156 aa11.58□□□□□ -0.56
USB1-202ENST00000423271 FAM223BA6NKX1 122 aa11.57□□□□□ -0.56
USB1-202ENST00000423271 BMPR1BO00238 502 aa11.57□□□□□ -0.56
USB1-202ENST00000423271 OR2A4O95047 310 aa11.57□□□□□ -0.56
USB1-202ENST00000423271 IL6RP08887 468 aaPredicted RBP11.57□□□□□ -0.56
USB1-202ENST00000423271 MYOD1P15172 320 aa11.57□□□□□ -0.56
USB1-202ENST00000423271 RPA2P15927 270 aa11.57□□□□□ -0.56
USB1-202ENST00000423271 TAS2R31P59538 309 aa11.57□□□□□ -0.56
USB1-202ENST00000423271 RPEL1Q2QD12 228 aa11.57□□□□□ -0.56
USB1-202ENST00000423271 FAM223AQ8IWN6 122 aa11.57□□□□□ -0.56
USB1-202ENST00000423271 Q8N1Y9 231 aa11.57□□□□□ -0.56
USB1-202ENST00000423271 OR2A7Q96R45 310 aa11.57□□□□□ -0.56
USB1-202ENST00000423271 RTBDNQ9BSG5 229 aaPredicted RBP11.57□□□□□ -0.56
USB1-202ENST00000423271 COPZ2Q9P299 210 aa11.57□□□□□ -0.56
USB1-202ENST00000423271 GPR132Q9UNW8 380 aa11.57□□□□□ -0.56
USB1-202ENST00000423271 OR2J3O76001 311 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 CSN3P07498 182 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 NQO2P16083 231 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 RPL27AP46776 148 aaKnown RBP11.56□□□□□ -0.56
USB1-202ENST00000423271 INPP1P49441 399 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 ATP5G2Q06055 141 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 SURF2Q15527 256 aaPredicted RBP11.56□□□□□ -0.56
USB1-202ENST00000423271 POU2AF1Q16633 256 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 OR4A47Q6IF82 309 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 LINC00299Q6ZSB3 139 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 CCDC71LQ8N9Z2 235 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 VSTM2AQ8TAG5 236 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 DEDD2Q8WXF8 326 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 FYTTD1Q96QD9 318 aaKnown RBP11.56□□□□□ -0.56
USB1-202ENST00000423271 C5orf66Q9H5L9 145 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 COMMD9Q9P000 198 aa11.56□□□□□ -0.56
USB1-202ENST00000423271 C14orf166Q9Y224 244 aaKnown RBP11.56□□□□□ -0.56
USB1-202ENST00000423271 STARD9Q9P2P6 4700 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 LINC00854A0A1B0GVQ3 168 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 IGHV4-30-4P0DP06 118 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 IL7P13232 177 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 AREGP15514 252 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 C15orf32Q32M92 178 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 NECAP1Q8NC96 275 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 DMBX1Q8NFW5 382 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 RCHY1Q96PM5 261 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 TP53RKQ96S44 253 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 AIFM2Q9BRQ8 373 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 FAM212BQ9NTI7 297 aaPredicted RBP11.55□□□□□ -0.56
USB1-202ENST00000423271 TMEM140Q9NV12 185 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 BET1LQ9NYM9 111 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 ZNF257Q9Y2Q1 563 aa11.55□□□□□ -0.56
USB1-202ENST00000423271 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.54□□□□□ -0.56
USB1-202ENST00000423271 TRAV3A0A0B4J244 114 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 C3orf85A0A1B0GTC6 90 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 IZUMO1RA6ND01 250 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 NPIPB5A8MRT5 1133 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 PPP5D1E7EU14 171 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 H0Y980 276 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 IGKV1-39P01597 117 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 IGKV1D-39P04432 117 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 G6PCP35575 357 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 ERVK-16P61578 105 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 SLC25A42Q86VD7 318 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 S100ZQ8WXG8 99 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 DMRT1Q9Y5R6 373 aa11.54□□□□□ -0.56
USB1-202ENST00000423271 CGB1A6NKQ9 187 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 MARCH11A6NNE9 402 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 UPK2O00526 184 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 KRASP01116 189 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 IGHV3-23P01764 117 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 HLA-AP01891 365 aaKnown RBP11.53□□□□□ -0.56
USB1-202ENST00000423271 REG1AP05451 166 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 SERPINE2P07093 398 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 EDN2P20800 178 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 MAS1LP35410 378 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 RPL8P62917 257 aaKnown RBP11.53□□□□□ -0.56
USB1-202ENST00000423271 TATDN3Q17R31 274 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 SP6Q3SY56 376 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 ADAMTSL5Q6ZMM2 481 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 OR4A5Q8NH83 315 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 TMEM230Q96A57 120 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 FANCD2OSQ96PS1 177 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 NAA60Q9H7X0 242 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 SIGLEC8Q9NYZ4 499 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 S4R3C0 116 aa11.53□□□□□ -0.56
USB1-202ENST00000423271 TEX13DA0A0J9YY54 714 aaPredicted RBP11.52□□□□□ -0.57
USB1-202ENST00000423271 NDUFB8O95169 186 aa11.52□□□□□ -0.57
USB1-202ENST00000423271 CRYGCP07315 174 aa11.52□□□□□ -0.57
USB1-202ENST00000423271 HLA-GP17693 338 aa11.52□□□□□ -0.57
USB1-202ENST00000423271 PSMB6P28072 239 aa11.52□□□□□ -0.57
USB1-202ENST00000423271 SGPP2Q8IWX5 399 aa11.52□□□□□ -0.57
USB1-202ENST00000423271 SEC22AQ96IW7 307 aa11.52□□□□□ -0.57
USB1-202ENST00000423271 CCDC140Q96MF4 163 aa11.52□□□□□ -0.57
USB1-202ENST00000423271 SCGB3A2Q96PL1 93 aa11.52□□□□□ -0.57
USB1-202ENST00000423271 CCDC32Q9BV29 185 aa11.52□□□□□ -0.57
USB1-202ENST00000423271 C19orf73Q9NVV2 129 aa11.52□□□□□ -0.57
USB1-202ENST00000423271 FBXL7Q9UJT9 491 aa11.52□□□□□ -0.57
USB1-202ENST00000423271 NAP1L6A6NFF2 107 aa11.51□□□□□ -0.57
USB1-202ENST00000423271 CRYM-AS1A6NIL9 109 aa11.51□□□□□ -0.57
USB1-202ENST00000423271 PLA2G10O15496 165 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms