RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 COX7A1P24310 79 aa10.96□□□□□ -0.66
MCF2L-213ENST00000421756 CD24P25063 80 aa10.96□□□□□ -0.66
MCF2L-213ENST00000421756 CCKARP32238 428 aa10.96□□□□□ -0.66
MCF2L-213ENST00000421756 SPCS3P61009 180 aa10.96□□□□□ -0.66
MCF2L-213ENST00000421756 FXYD3Q14802 87 aa10.96□□□□□ -0.66
MCF2L-213ENST00000421756 TMEM108Q6UXF1 575 aa10.96□□□□□ -0.66
MCF2L-213ENST00000421756 STPG3Q8N7X2 389 aa10.96□□□□□ -0.66
MCF2L-213ENST00000421756 HARBI1Q96MB7 349 aa10.96□□□□□ -0.66
MCF2L-213ENST00000421756 PIEZO1Q92508 2521 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 PPIHO43447 177 aaKnown RBP10.95□□□□□ -0.66
MCF2L-213ENST00000421756 S100A8P05109 93 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 MGST1P10620 155 aaKnown RBP10.95□□□□□ -0.66
MCF2L-213ENST00000421756 GAMTQ14353 236 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 C1orf162Q8NEQ5 155 aaPredicted RBP10.95□□□□□ -0.66
MCF2L-213ENST00000421756 OR10A7Q8NGE5 316 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 PLEKHA3Q9HB20 300 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 JPT1Q9UK76 154 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 TRAV5A0A0B4J249 113 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 FAM90A26D6RGX4 464 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 FRMD6-AS1P0C7T7 363 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 POLQO75417 2590 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 ACACBO00763 2458 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 E7EUB6 86 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 HOXA5P20719 270 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 MZT1Q08AG7 82 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 SGMS2Q8NHU3 365 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 GAFA1Q96PS6 74 aa10.95□□□□□ -0.66
MCF2L-213ENST00000421756 IL6RP08887 468 aaPredicted RBP10.94□□□□□ -0.66
MCF2L-213ENST00000421756 GRNP28799 593 aaKnown RBP10.94□□□□□ -0.66
MCF2L-213ENST00000421756 OR10J1P30954 320 aa10.94□□□□□ -0.66
MCF2L-213ENST00000421756 ZCCHC14Q8WYQ9 949 aaKnown RBP10.94□□□□□ -0.66
MCF2L-213ENST00000421756 GGTLC1Q9BX51 225 aa10.94□□□□□ -0.66
MCF2L-213ENST00000421756 A0A1B0GW64 132 aa10.94□□□□□ -0.66
MCF2L-213ENST00000421756 CDX1P47902 265 aaPredicted RBP10.94□□□□□ -0.66
MCF2L-213ENST00000421756 HTD2P86397 168 aa10.94□□□□□ -0.66
MCF2L-213ENST00000421756 FAM209BQ5JX69 171 aa10.94□□□□□ -0.66
MCF2L-213ENST00000421756 IGFL2Q6UWQ7 119 aa10.94□□□□□ -0.66
MCF2L-213ENST00000421756 DPPA3Q6W0C5 159 aa10.94□□□□□ -0.66
MCF2L-213ENST00000421756 PRR7Q8TB68 274 aa10.94□□□□□ -0.66
MCF2L-213ENST00000421756 PACRGQ96M98 296 aaPredicted RBP10.94□□□□□ -0.66
MCF2L-213ENST00000421756 EIF4EBP1Q13541 118 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-213ENST00000421756 Q6ZS92 163 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 COMMD5Q9GZQ3 224 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 SMDT1Q9H4I9 107 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 WDR83OSQ9Y284 106 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 YTHDF2Q9Y5A9 579 aaKnown RBP10.93□□□□□ -0.66
MCF2L-213ENST00000421756 S4R3C0 116 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 USP9YO00507 2555 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-213ENST00000421756 TRAV1-1A0A0B4J248 108 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 PIGBOS1A0A0B4J2F0 54 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 RBFOX2O43251 390 aaKnown RBP eCLIP10.93□□□□□ -0.664e-6■■□□□ 13.5
MCF2L-213ENST00000421756 YPEL1O60688 119 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 P0C879 139 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 SAA1P0DJI8 122 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-213ENST00000421756 ATP6V1FQ16864 119 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 KIAA1644Q3SXP7 199 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 PRR27Q6MZM9 219 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 YPEL2Q96QA6 119 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 CUBNO60494 3623 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 SLC25A17O43808 307 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 MBP02144 154 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 SMIM6P0DI80 62 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 HOXB1P14653 301 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-213ENST00000421756 CRYBB3P26998 211 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 GNB2P62879 340 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 SSBP2P81877 361 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-213ENST00000421756 OR2T10Q8NGZ9 312 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 LINC00479Q96M42 142 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 SCNM1Q9BWG6 230 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 GSX1Q9H4S2 264 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-213ENST00000421756 IDI2-AS1Q9NZ38 188 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 MYO18BQ8IUG5 2567 aa10.93□□□□□ -0.66
MCF2L-213ENST00000421756 F6UZH7 168 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 CA1P00915 261 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-213ENST00000421756 OR5G3P0C626 314 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 CT45A6P0DMU7 189 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 CT45A5P0DMU8 189 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 CT45A7P0DMV0 189 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 SUMO1P63165 101 aaKnown RBP10.92□□□□□ -0.66
MCF2L-213ENST00000421756 PMS2P11Q13670 270 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 ADIPOQQ15848 244 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 TEPPQ6URK8 271 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 CYP2G1PQ6ZSU1 146 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 MRPL41Q8IXM3 137 aaKnown RBP10.92□□□□□ -0.66
MCF2L-213ENST00000421756 YPEL4Q96NS1 127 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 TPSG1Q9NRR2 321 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 TRBV20OR9-2A0A075B6H5 130 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 CRYABP02511 175 aaKnown RBP10.92□□□□□ -0.66
MCF2L-213ENST00000421756 HSPE1P61604 102 aaKnown RBP10.92□□□□□ -0.66
MCF2L-213ENST00000421756 PNRC1Q12796 327 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-213ENST00000421756 PRSS33Q8NF86 280 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 RITA1Q96K30 269 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 SIRT7Q9NRC8 400 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 DOPEY2Q9Y3R5 2298 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 MDFIC2A0A1B0GVS7 189 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 OPRK1P41145 380 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 HLA-DRB5Q30154 266 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 OCC1Q8TAD7 63 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 BLNKQ8WV28 456 aa10.92□□□□□ -0.66
MCF2L-213ENST00000421756 NPVFQ9HCQ7 196 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms